Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409238

Identifier: 41409238

GI number: 41409238

Start: 3493485

End: 3494732

Strand: Reverse

Name: 41409238

Synonym: MAP3140c

Alternate gene names: NA

Gene position: 3494732-3493485 (Counterclockwise)

Preceding gene: 41409239

Following gene: 41409237

Centisome position: 72.36

GC content: 70.03

Gene sequence:

>1248_bases
ATGACCACCGTGCTGCGGGCGGCCCGATGGGCGGACGTGGTGACCGGAAAGATCCACGCACCGGCGGTGATCGTGGTCGA
CGACGAACGCATCTCGGCGATGAATCCCGAAGGGCCGCTGCCGGATTCGGCGACCACCGTCGACCTCGGGGACACCACGC
TGCTGCCCGGCCTGATGGACATGGAACTCAACCTGCTCATCGGCGGGCCGGGTGGGCCGGAGGGTCTGCCGTCGCCGATG
CACGGCGTGCAGGACGACCCCGCCTACCGCACCCTGCGCGGGGCGGTCAACGCGCGCACCACCTTGGAGGCCGGGTTCAC
CACCGTGCGCAACCTCGGGCTGATGGTCAAGACCGGGGGATATCTGCTCGACGTCGCGCTGCAACGCGCCGTCGACGCGG
GCTGGCACGCCGGGCCCCGGATCTATCCGGCCGGCCATGCCGTCACCCCGTACGGCGGGCATCTGGACCCGACGGTGTTT
CAGCGGCTGGCCCCCGGGATCATGCCGCTGTCGGTGGCCGAGGGCATCGCCAACGGGGTGCCCGACGTGATCGCCTGCGT
GCGGTACCAGATCCGGCACGGCGCCAAGCTGATCAAGGTGTCCGCCTCCGGCGGGGTGATGTCGCACAGCACCGCGCCCG
GGGCGCAGCAGTACTCCGACGCCGAATTCGCCGCGATCGCCGACGAGGCCCACCGGGCCGGTGTCCGGGTGGCCGCACAT
GCGGTGGGGGACAGCGCAATCCAGGCCTGCATCCGCGCGGGCATCGACTGCATCGAACACGGCTTTTTGGCCAGCGACGA
GACCATCCAGATGATGGTCGATCACGGCACGTTCCTGGTGTCGACCACCTACCTGACCGAGGCCATGGCCATCGACCGCA
TCGCGCCGGAACTGCGCAAGAAGGCGCTCGAGGTGTTCCCGCGGGCAAAGGCCATGCTGCCCAAGGCGATCGAGGCCGGC
GTCCGGATCGCCTGCGGCACCGATGCGCCGGCCATCCCGCACGGCCAGAACGCCAAGGAACTGGGCGCGCTGGTGCAGCG
GGGCATGACCCCCGCCCAGGCGATCCGGGCGGCGACCGTGGTGGCCGCCGAGCTGATCGAGGCCGACGACGAGCTGGGCA
GGCTGGCGCCCGGCTACCTCGCCGACATCATCGCGGTGCCCGGCAACCCGTTCGACGACATCGCCGCCACCCTTGACGTC
CGCTTCGTCATGAAGAATGGACAGATCTACAAAACCCCTGCGGCCTAG

Upstream 100 bases:

>100_bases
ATTCGATGATCATGGTGTCCTTCCCGGTGGAGTGCTGGAAACAGCCTCGCGTCCCCGATTCGGGCGCCTCGACCCTGGAC
TGCGTATCCGAGCCCGTGCC

Downstream 100 bases:

>100_bases
CAGGAGGCAGGCATGGAACTCACCGACAACATCCTGTGGTTGCTCAAGCAGGCTTTCTACTATTCGCTGACCACCATCAA
CGAGGCGATGCGGGAACACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MTTVLRAARWADVVTGKIHAPAVIVVDDERISAMNPEGPLPDSATTVDLGDTTLLPGLMDMELNLLIGGPGGPEGLPSPM
HGVQDDPAYRTLRGAVNARTTLEAGFTTVRNLGLMVKTGGYLLDVALQRAVDAGWHAGPRIYPAGHAVTPYGGHLDPTVF
QRLAPGIMPLSVAEGIANGVPDVIACVRYQIRHGAKLIKVSASGGVMSHSTAPGAQQYSDAEFAAIADEAHRAGVRVAAH
AVGDSAIQACIRAGIDCIEHGFLASDETIQMMVDHGTFLVSTTYLTEAMAIDRIAPELRKKALEVFPRAKAMLPKAIEAG
VRIACGTDAPAIPHGQNAKELGALVQRGMTPAQAIRAATVVAAELIEADDELGRLAPGYLADIIAVPGNPFDDIAATLDV
RFVMKNGQIYKTPAA

Sequences:

>Translated_415_residues
MTTVLRAARWADVVTGKIHAPAVIVVDDERISAMNPEGPLPDSATTVDLGDTTLLPGLMDMELNLLIGGPGGPEGLPSPM
HGVQDDPAYRTLRGAVNARTTLEAGFTTVRNLGLMVKTGGYLLDVALQRAVDAGWHAGPRIYPAGHAVTPYGGHLDPTVF
QRLAPGIMPLSVAEGIANGVPDVIACVRYQIRHGAKLIKVSASGGVMSHSTAPGAQQYSDAEFAAIADEAHRAGVRVAAH
AVGDSAIQACIRAGIDCIEHGFLASDETIQMMVDHGTFLVSTTYLTEAMAIDRIAPELRKKALEVFPRAKAMLPKAIEAG
VRIACGTDAPAIPHGQNAKELGALVQRGMTPAQAIRAATVVAAELIEADDELGRLAPGYLADIIAVPGNPFDDIAATLDV
RFVMKNGQIYKTPAA
>Mature_414_residues
TTVLRAARWADVVTGKIHAPAVIVVDDERISAMNPEGPLPDSATTVDLGDTTLLPGLMDMELNLLIGGPGGPEGLPSPMH
GVQDDPAYRTLRGAVNARTTLEAGFTTVRNLGLMVKTGGYLLDVALQRAVDAGWHAGPRIYPAGHAVTPYGGHLDPTVFQ
RLAPGIMPLSVAEGIANGVPDVIACVRYQIRHGAKLIKVSASGGVMSHSTAPGAQQYSDAEFAAIADEAHRAGVRVAAHA
VGDSAIQACIRAGIDCIEHGFLASDETIQMMVDHGTFLVSTTYLTEAMAIDRIAPELRKKALEVFPRAKAMLPKAIEAGV
RIACGTDAPAIPHGQNAKELGALVQRGMTPAQAIRAATVVAAELIEADDELGRLAPGYLADIIAVPGNPFDDIAATLDVR
FVMKNGQIYKTPAA

Specific function: Unknown

COG id: COG1228

COG function: function code Q; Imidazolonepropionase and related amidohydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To S.coelicolor SCO1861 [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322248, Length=334, Percent_Identity=32.3353293413174, Blast_Score=155, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680 [H]

Pfam domain/function: PF01979 Amidohydro_1 [H]

EC number: NA

Molecular weight: Translated: 43441; Mature: 43310

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVLRAARWADVVTGKIHAPAVIVVDDERISAMNPEGPLPDSATTVDLGDTTLLPGLMD
CCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCHHCCCCCC
MELNLLIGGPGGPEGLPSPMHGVQDDPAYRTLRGAVNARTTLEAGFTTVRNLGLMVKTGG
EEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCC
YLLDVALQRAVDAGWHAGPRIYPAGHAVTPYGGHLDPTVFQRLAPGIMPLSVAEGIANGV
HHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCC
PDVIACVRYQIRHGAKLIKVSASGGVMSHSTAPGAQQYSDAEFAAIADEAHRAGVRVAAH
HHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCCHHCCCCHHHHHHHHHHHCCCEEEHH
AVGDSAIQACIRAGIDCIEHGFLASDETIQMMVDHGTFLVSTTYLTEAMAIDRIAPELRK
HHCHHHHHHHHHHCHHHHHCCCCCCCCCEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHH
KALEVFPRAKAMLPKAIEAGVRIACGTDAPAIPHGQNAKELGALVQRGMTPAQAIRAATV
HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH
VAAELIEADDELGRLAPGYLADIIAVPGNPFDDIAATLDVRFVMKNGQIYKTPAA
HHHHHHHCCHHHHCCCCCHHHHEEECCCCCHHHHHHHHEEEEEEECCEEEECCCC
>Mature Secondary Structure 
TTVLRAARWADVVTGKIHAPAVIVVDDERISAMNPEGPLPDSATTVDLGDTTLLPGLMD
CHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCHHCCCCCC
MELNLLIGGPGGPEGLPSPMHGVQDDPAYRTLRGAVNARTTLEAGFTTVRNLGLMVKTGG
EEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCC
YLLDVALQRAVDAGWHAGPRIYPAGHAVTPYGGHLDPTVFQRLAPGIMPLSVAEGIANGV
HHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCC
PDVIACVRYQIRHGAKLIKVSASGGVMSHSTAPGAQQYSDAEFAAIADEAHRAGVRVAAH
HHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCCHHCCCCHHHHHHHHHHHCCCEEEHH
AVGDSAIQACIRAGIDCIEHGFLASDETIQMMVDHGTFLVSTTYLTEAMAIDRIAPELRK
HHCHHHHHHHHHHCHHHHHCCCCCCCCCEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHH
KALEVFPRAKAMLPKAIEAGVRIACGTDAPAIPHGQNAKELGALVQRGMTPAQAIRAATV
HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH
VAAELIEADDELGRLAPGYLADIIAVPGNPFDDIAATLDVRFVMKNGQIYKTPAA
HHHHHHHCCHHHHCCCCCHHHHEEECCCCCHHHHHHHHEEEEEEECCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]