| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409238
Identifier: 41409238
GI number: 41409238
Start: 3493485
End: 3494732
Strand: Reverse
Name: 41409238
Synonym: MAP3140c
Alternate gene names: NA
Gene position: 3494732-3493485 (Counterclockwise)
Preceding gene: 41409239
Following gene: 41409237
Centisome position: 72.36
GC content: 70.03
Gene sequence:
>1248_bases ATGACCACCGTGCTGCGGGCGGCCCGATGGGCGGACGTGGTGACCGGAAAGATCCACGCACCGGCGGTGATCGTGGTCGA CGACGAACGCATCTCGGCGATGAATCCCGAAGGGCCGCTGCCGGATTCGGCGACCACCGTCGACCTCGGGGACACCACGC TGCTGCCCGGCCTGATGGACATGGAACTCAACCTGCTCATCGGCGGGCCGGGTGGGCCGGAGGGTCTGCCGTCGCCGATG CACGGCGTGCAGGACGACCCCGCCTACCGCACCCTGCGCGGGGCGGTCAACGCGCGCACCACCTTGGAGGCCGGGTTCAC CACCGTGCGCAACCTCGGGCTGATGGTCAAGACCGGGGGATATCTGCTCGACGTCGCGCTGCAACGCGCCGTCGACGCGG GCTGGCACGCCGGGCCCCGGATCTATCCGGCCGGCCATGCCGTCACCCCGTACGGCGGGCATCTGGACCCGACGGTGTTT CAGCGGCTGGCCCCCGGGATCATGCCGCTGTCGGTGGCCGAGGGCATCGCCAACGGGGTGCCCGACGTGATCGCCTGCGT GCGGTACCAGATCCGGCACGGCGCCAAGCTGATCAAGGTGTCCGCCTCCGGCGGGGTGATGTCGCACAGCACCGCGCCCG GGGCGCAGCAGTACTCCGACGCCGAATTCGCCGCGATCGCCGACGAGGCCCACCGGGCCGGTGTCCGGGTGGCCGCACAT GCGGTGGGGGACAGCGCAATCCAGGCCTGCATCCGCGCGGGCATCGACTGCATCGAACACGGCTTTTTGGCCAGCGACGA GACCATCCAGATGATGGTCGATCACGGCACGTTCCTGGTGTCGACCACCTACCTGACCGAGGCCATGGCCATCGACCGCA TCGCGCCGGAACTGCGCAAGAAGGCGCTCGAGGTGTTCCCGCGGGCAAAGGCCATGCTGCCCAAGGCGATCGAGGCCGGC GTCCGGATCGCCTGCGGCACCGATGCGCCGGCCATCCCGCACGGCCAGAACGCCAAGGAACTGGGCGCGCTGGTGCAGCG GGGCATGACCCCCGCCCAGGCGATCCGGGCGGCGACCGTGGTGGCCGCCGAGCTGATCGAGGCCGACGACGAGCTGGGCA GGCTGGCGCCCGGCTACCTCGCCGACATCATCGCGGTGCCCGGCAACCCGTTCGACGACATCGCCGCCACCCTTGACGTC CGCTTCGTCATGAAGAATGGACAGATCTACAAAACCCCTGCGGCCTAG
Upstream 100 bases:
>100_bases ATTCGATGATCATGGTGTCCTTCCCGGTGGAGTGCTGGAAACAGCCTCGCGTCCCCGATTCGGGCGCCTCGACCCTGGAC TGCGTATCCGAGCCCGTGCC
Downstream 100 bases:
>100_bases CAGGAGGCAGGCATGGAACTCACCGACAACATCCTGTGGTTGCTCAAGCAGGCTTTCTACTATTCGCTGACCACCATCAA CGAGGCGATGCGGGAACACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MTTVLRAARWADVVTGKIHAPAVIVVDDERISAMNPEGPLPDSATTVDLGDTTLLPGLMDMELNLLIGGPGGPEGLPSPM HGVQDDPAYRTLRGAVNARTTLEAGFTTVRNLGLMVKTGGYLLDVALQRAVDAGWHAGPRIYPAGHAVTPYGGHLDPTVF QRLAPGIMPLSVAEGIANGVPDVIACVRYQIRHGAKLIKVSASGGVMSHSTAPGAQQYSDAEFAAIADEAHRAGVRVAAH AVGDSAIQACIRAGIDCIEHGFLASDETIQMMVDHGTFLVSTTYLTEAMAIDRIAPELRKKALEVFPRAKAMLPKAIEAG VRIACGTDAPAIPHGQNAKELGALVQRGMTPAQAIRAATVVAAELIEADDELGRLAPGYLADIIAVPGNPFDDIAATLDV RFVMKNGQIYKTPAA
Sequences:
>Translated_415_residues MTTVLRAARWADVVTGKIHAPAVIVVDDERISAMNPEGPLPDSATTVDLGDTTLLPGLMDMELNLLIGGPGGPEGLPSPM HGVQDDPAYRTLRGAVNARTTLEAGFTTVRNLGLMVKTGGYLLDVALQRAVDAGWHAGPRIYPAGHAVTPYGGHLDPTVF QRLAPGIMPLSVAEGIANGVPDVIACVRYQIRHGAKLIKVSASGGVMSHSTAPGAQQYSDAEFAAIADEAHRAGVRVAAH AVGDSAIQACIRAGIDCIEHGFLASDETIQMMVDHGTFLVSTTYLTEAMAIDRIAPELRKKALEVFPRAKAMLPKAIEAG VRIACGTDAPAIPHGQNAKELGALVQRGMTPAQAIRAATVVAAELIEADDELGRLAPGYLADIIAVPGNPFDDIAATLDV RFVMKNGQIYKTPAA >Mature_414_residues TTVLRAARWADVVTGKIHAPAVIVVDDERISAMNPEGPLPDSATTVDLGDTTLLPGLMDMELNLLIGGPGGPEGLPSPMH GVQDDPAYRTLRGAVNARTTLEAGFTTVRNLGLMVKTGGYLLDVALQRAVDAGWHAGPRIYPAGHAVTPYGGHLDPTVFQ RLAPGIMPLSVAEGIANGVPDVIACVRYQIRHGAKLIKVSASGGVMSHSTAPGAQQYSDAEFAAIADEAHRAGVRVAAHA VGDSAIQACIRAGIDCIEHGFLASDETIQMMVDHGTFLVSTTYLTEAMAIDRIAPELRKKALEVFPRAKAMLPKAIEAGV RIACGTDAPAIPHGQNAKELGALVQRGMTPAQAIRAATVVAAELIEADDELGRLAPGYLADIIAVPGNPFDDIAATLDVR FVMKNGQIYKTPAA
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To S.coelicolor SCO1861 [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322248, Length=334, Percent_Identity=32.3353293413174, Blast_Score=155, Evalue=1e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: NA
Molecular weight: Translated: 43441; Mature: 43310
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVLRAARWADVVTGKIHAPAVIVVDDERISAMNPEGPLPDSATTVDLGDTTLLPGLMD CCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCHHCCCCCC MELNLLIGGPGGPEGLPSPMHGVQDDPAYRTLRGAVNARTTLEAGFTTVRNLGLMVKTGG EEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCC YLLDVALQRAVDAGWHAGPRIYPAGHAVTPYGGHLDPTVFQRLAPGIMPLSVAEGIANGV HHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCC PDVIACVRYQIRHGAKLIKVSASGGVMSHSTAPGAQQYSDAEFAAIADEAHRAGVRVAAH HHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCCHHCCCCHHHHHHHHHHHCCCEEEHH AVGDSAIQACIRAGIDCIEHGFLASDETIQMMVDHGTFLVSTTYLTEAMAIDRIAPELRK HHCHHHHHHHHHHCHHHHHCCCCCCCCCEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHH KALEVFPRAKAMLPKAIEAGVRIACGTDAPAIPHGQNAKELGALVQRGMTPAQAIRAATV HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH VAAELIEADDELGRLAPGYLADIIAVPGNPFDDIAATLDVRFVMKNGQIYKTPAA HHHHHHHCCHHHHCCCCCHHHHEEECCCCCHHHHHHHHEEEEEEECCEEEECCCC >Mature Secondary Structure TTVLRAARWADVVTGKIHAPAVIVVDDERISAMNPEGPLPDSATTVDLGDTTLLPGLMD CHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCHHCCCCCC MELNLLIGGPGGPEGLPSPMHGVQDDPAYRTLRGAVNARTTLEAGFTTVRNLGLMVKTGG EEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCC YLLDVALQRAVDAGWHAGPRIYPAGHAVTPYGGHLDPTVFQRLAPGIMPLSVAEGIANGV HHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCC PDVIACVRYQIRHGAKLIKVSASGGVMSHSTAPGAQQYSDAEFAAIADEAHRAGVRVAAH HHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCCHHCCCCHHHHHHHHHHHCCCEEEHH AVGDSAIQACIRAGIDCIEHGFLASDETIQMMVDHGTFLVSTTYLTEAMAIDRIAPELRK HHCHHHHHHHHHHCHHHHHCCCCCCCCCEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHH KALEVFPRAKAMLPKAIEAGVRIACGTDAPAIPHGQNAKELGALVQRGMTPAQAIRAATV HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH VAAELIEADDELGRLAPGYLADIIAVPGNPFDDIAATLDVRFVMKNGQIYKTPAA HHHHHHHCCHHHHCCCCCHHHHEEECCCCCHHHHHHHHEEEEEEECCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]