| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409165
Identifier: 41409165
GI number: 41409165
Start: 3412787
End: 3413521
Strand: Reverse
Name: 41409165
Synonym: MAP3067c
Alternate gene names: NA
Gene position: 3413521-3412787 (Counterclockwise)
Preceding gene: 41409176
Following gene: 41409164
Centisome position: 70.68
GC content: 71.43
Gene sequence:
>735_bases ATGGAAAAGCTCGGCCGGCGGTGCGGGCGGTTGGCGGGCGCGTCGGCCCTCGCGGTGATACTGCTCTGGGCGGCGCCCGG CCACGCGACCGCCGACCCGGCCGTCACCGCGTCGCCCGGCATGGAAATCCATCAGGGCCACGCCGTCTGCATGGTGGGAC TGGTGGAGCCGCGACTGCGGGTCGCCATCACCAGCGGGCAGTGCGACGGCGGGCAGTCGGCGGTGACCGACCGTGACCAC CACCCGATCGGCGAGGTGGTGCTCGGCCGTCGCCAGCTCGACACCGACTCCGCCGACGCCTCGACGCTGCCGGTGGAATA CGAAGTCATCGCTCTGGCAAGGGATGTGACGGCCTCGGACCTGCTGCCGACGGGCCGCCGGCTGCTGGCCGCGCCCGGGC TGCGCGCCGTGCCGGGGCTGCCGGTGTGTCAGCTGCGCCGATCGACCGGCCAGCACTGTGGTTCCGTCGGCACGGTCACC GGCGGTCGTTTCGCCATCGCCGACATGGTGGTGGACGGTCGCGACGTCGGCGGTCCGGTCTACGCCCTGACCGACGACGG CAACGCCGTCATCGTGGGCCTGTTCGAGGGCATGGTCCGGTCGTCACCCCAGTTCGAGTCGTGGCAGGCGGTCATGGCTC AGGTCTACGTCGACGGCCGCTTGCCCGGGGCCCAGCAACAGTTGCCCGCTCTACGCATGATCGATTGGCGCACCGGTTCG TTTGCGGCAGCGTAA
Upstream 100 bases:
>100_bases AGCGCCGACCAGGAGTTTGCCGGTCCGCCCGCGGGGTATACCCGTGTTCAGTGACGTGCGCGTTCGATCCCCTGAGGAAC ACGAGGGGTGGTGCGGCCCA
Downstream 100 bases:
>100_bases GTTTCGTGCCTGCGGTCGGCCGAAGGTCGTGCGCTCGGGCGGGTTTCCGTCGACCCAGAACGGGAATCCGCGGCCGGTGA ACGTTTTCGAGCTGGCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MEKLGRRCGRLAGASALAVILLWAAPGHATADPAVTASPGMEIHQGHAVCMVGLVEPRLRVAITSGQCDGGQSAVTDRDH HPIGEVVLGRRQLDTDSADASTLPVEYEVIALARDVTASDLLPTGRRLLAAPGLRAVPGLPVCQLRRSTGQHCGSVGTVT GGRFAIADMVVDGRDVGGPVYALTDDGNAVIVGLFEGMVRSSPQFESWQAVMAQVYVDGRLPGAQQQLPALRMIDWRTGS FAAA
Sequences:
>Translated_244_residues MEKLGRRCGRLAGASALAVILLWAAPGHATADPAVTASPGMEIHQGHAVCMVGLVEPRLRVAITSGQCDGGQSAVTDRDH HPIGEVVLGRRQLDTDSADASTLPVEYEVIALARDVTASDLLPTGRRLLAAPGLRAVPGLPVCQLRRSTGQHCGSVGTVT GGRFAIADMVVDGRDVGGPVYALTDDGNAVIVGLFEGMVRSSPQFESWQAVMAQVYVDGRLPGAQQQLPALRMIDWRTGS FAAA >Mature_244_residues MEKLGRRCGRLAGASALAVILLWAAPGHATADPAVTASPGMEIHQGHAVCMVGLVEPRLRVAITSGQCDGGQSAVTDRDH HPIGEVVLGRRQLDTDSADASTLPVEYEVIALARDVTASDLLPTGRRLLAAPGLRAVPGLPVCQLRRSTGQHCGSVGTVT GGRFAIADMVVDGRDVGGPVYALTDDGNAVIVGLFEGMVRSSPQFESWQAVMAQVYVDGRLPGAQQQLPALRMIDWRTGS FAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009003 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25510; Mature: 25510
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLGRRCGRLAGASALAVILLWAAPGHATADPAVTASPGMEIHQGHAVCMVGLVEPRLR CCHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCEECCCCCEEECCCEEEEEEECCCEEE VAITSGQCDGGQSAVTDRDHHPIGEVVLGRRQLDTDSADASTLPVEYEVIALARDVTASD EEEECCCCCCCCCCCCCCCCCCHHHHHHCCHHCCCCCCCCCCCCEEEEEEEEECCCCHHH LLPTGRRLLAAPGLRAVPGLPVCQLRRSTGQHCGSVGTVTGGRFAIADMVVDGRDVGGPV CCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCE YALTDDGNAVIVGLFEGMVRSSPQFESWQAVMAQVYVDGRLPGAQQQLPALRMIDWRTGS EEEECCCCEEEEEEHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHCCEEEEEECCCCC FAAA CCCC >Mature Secondary Structure MEKLGRRCGRLAGASALAVILLWAAPGHATADPAVTASPGMEIHQGHAVCMVGLVEPRLR CCHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCEECCCCCEEECCCEEEEEEECCCEEE VAITSGQCDGGQSAVTDRDHHPIGEVVLGRRQLDTDSADASTLPVEYEVIALARDVTASD EEEECCCCCCCCCCCCCCCCCCHHHHHHCCHHCCCCCCCCCCCCEEEEEEEEECCCCHHH LLPTGRRLLAAPGLRAVPGLPVCQLRRSTGQHCGSVGTVTGGRFAIADMVVDGRDVGGPV CCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCE YALTDDGNAVIVGLFEGMVRSSPQFESWQAVMAQVYVDGRLPGAQQQLPALRMIDWRTGS EEEECCCCEEEEEEHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHCCEEEEEECCCCC FAAA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]