Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409165

Identifier: 41409165

GI number: 41409165

Start: 3412787

End: 3413521

Strand: Reverse

Name: 41409165

Synonym: MAP3067c

Alternate gene names: NA

Gene position: 3413521-3412787 (Counterclockwise)

Preceding gene: 41409176

Following gene: 41409164

Centisome position: 70.68

GC content: 71.43

Gene sequence:

>735_bases
ATGGAAAAGCTCGGCCGGCGGTGCGGGCGGTTGGCGGGCGCGTCGGCCCTCGCGGTGATACTGCTCTGGGCGGCGCCCGG
CCACGCGACCGCCGACCCGGCCGTCACCGCGTCGCCCGGCATGGAAATCCATCAGGGCCACGCCGTCTGCATGGTGGGAC
TGGTGGAGCCGCGACTGCGGGTCGCCATCACCAGCGGGCAGTGCGACGGCGGGCAGTCGGCGGTGACCGACCGTGACCAC
CACCCGATCGGCGAGGTGGTGCTCGGCCGTCGCCAGCTCGACACCGACTCCGCCGACGCCTCGACGCTGCCGGTGGAATA
CGAAGTCATCGCTCTGGCAAGGGATGTGACGGCCTCGGACCTGCTGCCGACGGGCCGCCGGCTGCTGGCCGCGCCCGGGC
TGCGCGCCGTGCCGGGGCTGCCGGTGTGTCAGCTGCGCCGATCGACCGGCCAGCACTGTGGTTCCGTCGGCACGGTCACC
GGCGGTCGTTTCGCCATCGCCGACATGGTGGTGGACGGTCGCGACGTCGGCGGTCCGGTCTACGCCCTGACCGACGACGG
CAACGCCGTCATCGTGGGCCTGTTCGAGGGCATGGTCCGGTCGTCACCCCAGTTCGAGTCGTGGCAGGCGGTCATGGCTC
AGGTCTACGTCGACGGCCGCTTGCCCGGGGCCCAGCAACAGTTGCCCGCTCTACGCATGATCGATTGGCGCACCGGTTCG
TTTGCGGCAGCGTAA

Upstream 100 bases:

>100_bases
AGCGCCGACCAGGAGTTTGCCGGTCCGCCCGCGGGGTATACCCGTGTTCAGTGACGTGCGCGTTCGATCCCCTGAGGAAC
ACGAGGGGTGGTGCGGCCCA

Downstream 100 bases:

>100_bases
GTTTCGTGCCTGCGGTCGGCCGAAGGTCGTGCGCTCGGGCGGGTTTCCGTCGACCCAGAACGGGAATCCGCGGCCGGTGA
ACGTTTTCGAGCTGGCGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MEKLGRRCGRLAGASALAVILLWAAPGHATADPAVTASPGMEIHQGHAVCMVGLVEPRLRVAITSGQCDGGQSAVTDRDH
HPIGEVVLGRRQLDTDSADASTLPVEYEVIALARDVTASDLLPTGRRLLAAPGLRAVPGLPVCQLRRSTGQHCGSVGTVT
GGRFAIADMVVDGRDVGGPVYALTDDGNAVIVGLFEGMVRSSPQFESWQAVMAQVYVDGRLPGAQQQLPALRMIDWRTGS
FAAA

Sequences:

>Translated_244_residues
MEKLGRRCGRLAGASALAVILLWAAPGHATADPAVTASPGMEIHQGHAVCMVGLVEPRLRVAITSGQCDGGQSAVTDRDH
HPIGEVVLGRRQLDTDSADASTLPVEYEVIALARDVTASDLLPTGRRLLAAPGLRAVPGLPVCQLRRSTGQHCGSVGTVT
GGRFAIADMVVDGRDVGGPVYALTDDGNAVIVGLFEGMVRSSPQFESWQAVMAQVYVDGRLPGAQQQLPALRMIDWRTGS
FAAA
>Mature_244_residues
MEKLGRRCGRLAGASALAVILLWAAPGHATADPAVTASPGMEIHQGHAVCMVGLVEPRLRVAITSGQCDGGQSAVTDRDH
HPIGEVVLGRRQLDTDSADASTLPVEYEVIALARDVTASDLLPTGRRLLAAPGLRAVPGLPVCQLRRSTGQHCGSVGTVT
GGRFAIADMVVDGRDVGGPVYALTDDGNAVIVGLFEGMVRSSPQFESWQAVMAQVYVDGRLPGAQQQLPALRMIDWRTGS
FAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009003 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25510; Mature: 25510

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKLGRRCGRLAGASALAVILLWAAPGHATADPAVTASPGMEIHQGHAVCMVGLVEPRLR
CCHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCEECCCCCEEECCCEEEEEEECCCEEE
VAITSGQCDGGQSAVTDRDHHPIGEVVLGRRQLDTDSADASTLPVEYEVIALARDVTASD
EEEECCCCCCCCCCCCCCCCCCHHHHHHCCHHCCCCCCCCCCCCEEEEEEEEECCCCHHH
LLPTGRRLLAAPGLRAVPGLPVCQLRRSTGQHCGSVGTVTGGRFAIADMVVDGRDVGGPV
CCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCE
YALTDDGNAVIVGLFEGMVRSSPQFESWQAVMAQVYVDGRLPGAQQQLPALRMIDWRTGS
EEEECCCCEEEEEEHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHCCEEEEEECCCCC
FAAA
CCCC
>Mature Secondary Structure
MEKLGRRCGRLAGASALAVILLWAAPGHATADPAVTASPGMEIHQGHAVCMVGLVEPRLR
CCHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCEECCCCCEEECCCEEEEEEECCCEEE
VAITSGQCDGGQSAVTDRDHHPIGEVVLGRRQLDTDSADASTLPVEYEVIALARDVTASD
EEEECCCCCCCCCCCCCCCCCCHHHHHHCCHHCCCCCCCCCCCCEEEEEEEEECCCCHHH
LLPTGRRLLAAPGLRAVPGLPVCQLRRSTGQHCGSVGTVTGGRFAIADMVVDGRDVGGPV
CCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCE
YALTDDGNAVIVGLFEGMVRSSPQFESWQAVMAQVYVDGRLPGAQQQLPALRMIDWRTGS
EEEECCCCEEEEEEHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHCCEEEEEECCCCC
FAAA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]