| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is mmpL2
Identifier: 41409147
GI number: 41409147
Start: 3390841
End: 3393759
Strand: Reverse
Name: mmpL2
Synonym: MAP3049c
Alternate gene names: 41409147
Gene position: 3393759-3390841 (Counterclockwise)
Preceding gene: 41409148
Following gene: 41409146
Centisome position: 70.27
GC content: 64.85
Gene sequence:
>2919_bases ATGACCACGGATCAGGCCACCAGATCCGTTGTGGCGCAGACGATTCGTCGTCTCTCGGTACCGATACTGCTGGTGTGGGT GGCGGTGGCCGCCATCTCCAACATCGCCGTGCCGAACCTGGAGGATGTGGCCAAGGCCCACAACGTGTCCCTGAACACCC CGGCCGCGCCGTCGTTTCAGGCGATGCAGCACATCGGCAAGGTGTTCCACGAATACGATTCCGACAGTGCGGCGATGATC GTGTTGGAGGGCGACAAGCCGCTGGGCGACGACGCCCACCGGTTCTACGACGCGTTGGTCGGCAAGCTCGAACACGACAC CAAACACGTCGAGCACGTACAGAACTTCTGGGGCGATCCGCTGACCGCGGCGGGCTCGCAGAGCAAGGACGGCAAGGCCG CCTACGTGCAGGTCTATCTCGCCGGCAACCAGGGCGATGCGTTGGCCAATGAGTCCGTCGACGCCATCCGCAACATCGTG GAGCACACGCCGCCGCCACCGGGGGTCAAGGCGTACGTGACCGGGGCGGCGCCGCTGGTCACCGATCAGTTCGAGGTGGG CAGCAAGGGCATCTTCAAGGTCACCGTGATCACCGTGCTGGTGATCCTGGCCATGCTGCTGTGGGTTTACCGCTCCGTCA CAGCGGTTTTCGTGTTGGTCACGGTGATCGTCGAAATGGCCGCCGCCCGGGGCATTGTGGCGTTTCTTGGCAGCGTCGGG TTGATCGGGCTGTCGACGTATGCGACGAACCTGCTCACGCTGCTCGTCATCGCCGCCGGCACCGACTACGCGATCTTCTT CGTCGGCCGTTACCACGAGGCACGCCACGAAGGGCAGGATCGCGAAACCGCCTACTACACCATGTATCGCGGAACCACCC ATGTGGTGCTGGGGTCGGGGCTGACGGTGGCGGGTGCGGTGTTGTGTCTGCGCTTCACGCGGCTGAATTACTTTCAGAGC CTGGGGATTCCGGCCGCGATAGGCATCGGGGTCGCCCTGGCGGCCGCGCTCAGCCTGACCCCCGCGGTGATCACGGTGGG CAGCCTGTTCGGGCTGTTCGACCCCAAACGCCAGATGGCGACGCGGGGGTGGCGGCGCATCGGCACCGCGATCGTGCGCT GGCCGGGCCCGATCCTGGTGGTGGCCACCGGGGTTGCCCTCGTCGGCCTGCTCGCCCTGCCCGGCTATCGGACGAACTAC GACGCCCGCCCCTACATGCCGGCCAGCGCCCCGGCGAACACCGGCTACACGGCCGCCGAGCGGCACTTCTCGCAGGCCCG GCTCAATCCCGAGCTGTTGATGATCGAGACCGATCACGACATGCGCAATCCGGCCGACATGATCAACTTGGAGCGCGTCG CCAAGGCGATCGCGCACCTTCCCGGCATCGCCCAGGTCCAGTCCATGACCCGGCCCCTGGGTACCCCGATCGAACACACC TCGTTGGCATTCCAGATCAGCGCGGGCAGCATCGGCAGCATCGAAAACCTGCAATACCAGAAGGAGCGCGCCGAGGATCT GCTCAAACAGGCCGACAACCTCAAAGACACGATCGGCATTCTCAACCAGCAGTATGCGCTGCAAAAGCAGCTCGCGGCCT CCACCCACGATGAGACGCAGAGCTTTCACGACACCATCGCCATCATCAACGACCTGCGGGACAAGATCGCGAACTTCGAC GATTTCTTCCGGCCGGTGCGCAGCTATTTCTATTGGGAGAAGCACTGTTTCGACATTCCGGCGTGCTTCGCGTTCCGATC CGTCTTCGACGCGCTCGACGGTATCGACGAGCTGAGCGCGCAGTTTGAAAAGCTCACCGCCAGCCTGGACAAGCTGGACG CGGGCCAGCAAAAACTGGTGACCCTGTTGCCGCCCCAGATCGCCGATCAGGAGAAGAACCTCGCGCTGACGCTGTCCAAC TACGCCACCAACCTCGGGATCAACGCCCAGACCCGGGCGAACACCGACACCGCCACCGCACTGGGCCAGGCGTACGACGC CGCGAAGAACGACGATTCGTTCTATTTGCCGCCGGAGGCCTTCACCAACCCCGAATTCAAACGAGGACTGAAACTGTTCC TCTCGCCGGACGGCAAGGCCGCCCGCATGATCATCTCGCACGAGGGCGATCCGGCCACCCCCGAAGGCATTTCGCACATC GAGCCGATTCGCAACGCCGCCAAACAGGCCGTCAAGAACACGCCGTTGGGGGACTCCAACATCTATCTCGCCGGCACCGC CGCAACGTACAAGGACATCGCCGAGGGCGCCAAATACGACCTGCTGATCGCGGGGATCGCCGCGCTGAGCCTCATCCTGC TGATCATGGTGCTCATCACCCGAAGCCTGGTCGCCGCGATCGTCATCGTCGGCACGGTGGCGCTGTCGTTGGGCGCCTCG TTCGGCCTGTCCGTGCTGGTTTGGCAGGACATCCTCGGCATCAAGCTGTACTGGATCTGCCTGGCGCTGTCCGTCATCAT CCTGCTGGCGGTGGGATCCGACTACAACCTGCTGCTGATCTCCCGGTTCAGGGAGGAGATCCACGCCGGTTTGAACACGG GCATCATCCGGTCCATGGCGGGCAGCGGGGCGGTGGTGACCTCCGCCGGGCTGGTGTTCGCCTTTACCATGGCCTCCTTC GTCTCCGCCTCGCTGTTGGTGCTGGGTCAGATCGGGACGACGATCGCGCTGGGGCTGTTGTTCGACACGTTGATCGTGCG GTCGTTCATGACGCCGTCGGTCGCCGCGCTGCTGGGCCGGTGGTTCTGGTGGCCCCAGCGGGTGCGTCCCCGGCCGGCCA GCACGATGCTGCGGCCCTACGGTCCGCGGCCGGCGGTTCGCCAGCTGCTGCTCTGGGAAGACGGCGACCCCGCCGTCGCG CCCGAGACACCGTCAGCAGCAAGGCATTCCCGCGGCTAG
Upstream 100 bases:
>100_bases GTGATTCGCTCGGCTGTCGCATCACGGTGGACGGTGACGTCAAGGACGAAAGGATCGTCAACCAGGTGAACGCCTACACC TTCTGTCTGGTGAAGTCCGC
Downstream 100 bases:
>100_bases TTCTCCGGCGATGCCACACCGCCTTGTCCGGGAAAGGGTGAAGGAACTTGGGCCTGTTTGGTTATCTGGCGGTGCTCGCC GGCGTGACCGAATTGGTGCT
Product: MmpL2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 972; Mature: 971
Protein sequence:
>972_residues MTTDQATRSVVAQTIRRLSVPILLVWVAVAAISNIAVPNLEDVAKAHNVSLNTPAAPSFQAMQHIGKVFHEYDSDSAAMI VLEGDKPLGDDAHRFYDALVGKLEHDTKHVEHVQNFWGDPLTAAGSQSKDGKAAYVQVYLAGNQGDALANESVDAIRNIV EHTPPPPGVKAYVTGAAPLVTDQFEVGSKGIFKVTVITVLVILAMLLWVYRSVTAVFVLVTVIVEMAAARGIVAFLGSVG LIGLSTYATNLLTLLVIAAGTDYAIFFVGRYHEARHEGQDRETAYYTMYRGTTHVVLGSGLTVAGAVLCLRFTRLNYFQS LGIPAAIGIGVALAAALSLTPAVITVGSLFGLFDPKRQMATRGWRRIGTAIVRWPGPILVVATGVALVGLLALPGYRTNY DARPYMPASAPANTGYTAAERHFSQARLNPELLMIETDHDMRNPADMINLERVAKAIAHLPGIAQVQSMTRPLGTPIEHT SLAFQISAGSIGSIENLQYQKERAEDLLKQADNLKDTIGILNQQYALQKQLAASTHDETQSFHDTIAIINDLRDKIANFD DFFRPVRSYFYWEKHCFDIPACFAFRSVFDALDGIDELSAQFEKLTASLDKLDAGQQKLVTLLPPQIADQEKNLALTLSN YATNLGINAQTRANTDTATALGQAYDAAKNDDSFYLPPEAFTNPEFKRGLKLFLSPDGKAARMIISHEGDPATPEGISHI EPIRNAAKQAVKNTPLGDSNIYLAGTAATYKDIAEGAKYDLLIAGIAALSLILLIMVLITRSLVAAIVIVGTVALSLGAS FGLSVLVWQDILGIKLYWICLALSVIILLAVGSDYNLLLISRFREEIHAGLNTGIIRSMAGSGAVVTSAGLVFAFTMASF VSASLLVLGQIGTTIALGLLFDTLIVRSFMTPSVAALLGRWFWWPQRVRPRPASTMLRPYGPRPAVRQLLLWEDGDPAVA PETPSAARHSRG
Sequences:
>Translated_972_residues MTTDQATRSVVAQTIRRLSVPILLVWVAVAAISNIAVPNLEDVAKAHNVSLNTPAAPSFQAMQHIGKVFHEYDSDSAAMI VLEGDKPLGDDAHRFYDALVGKLEHDTKHVEHVQNFWGDPLTAAGSQSKDGKAAYVQVYLAGNQGDALANESVDAIRNIV EHTPPPPGVKAYVTGAAPLVTDQFEVGSKGIFKVTVITVLVILAMLLWVYRSVTAVFVLVTVIVEMAAARGIVAFLGSVG LIGLSTYATNLLTLLVIAAGTDYAIFFVGRYHEARHEGQDRETAYYTMYRGTTHVVLGSGLTVAGAVLCLRFTRLNYFQS LGIPAAIGIGVALAAALSLTPAVITVGSLFGLFDPKRQMATRGWRRIGTAIVRWPGPILVVATGVALVGLLALPGYRTNY DARPYMPASAPANTGYTAAERHFSQARLNPELLMIETDHDMRNPADMINLERVAKAIAHLPGIAQVQSMTRPLGTPIEHT SLAFQISAGSIGSIENLQYQKERAEDLLKQADNLKDTIGILNQQYALQKQLAASTHDETQSFHDTIAIINDLRDKIANFD DFFRPVRSYFYWEKHCFDIPACFAFRSVFDALDGIDELSAQFEKLTASLDKLDAGQQKLVTLLPPQIADQEKNLALTLSN YATNLGINAQTRANTDTATALGQAYDAAKNDDSFYLPPEAFTNPEFKRGLKLFLSPDGKAARMIISHEGDPATPEGISHI EPIRNAAKQAVKNTPLGDSNIYLAGTAATYKDIAEGAKYDLLIAGIAALSLILLIMVLITRSLVAAIVIVGTVALSLGAS FGLSVLVWQDILGIKLYWICLALSVIILLAVGSDYNLLLISRFREEIHAGLNTGIIRSMAGSGAVVTSAGLVFAFTMASF VSASLLVLGQIGTTIALGLLFDTLIVRSFMTPSVAALLGRWFWWPQRVRPRPASTMLRPYGPRPAVRQLLLWEDGDPAVA PETPSAARHSRG >Mature_971_residues TTDQATRSVVAQTIRRLSVPILLVWVAVAAISNIAVPNLEDVAKAHNVSLNTPAAPSFQAMQHIGKVFHEYDSDSAAMIV LEGDKPLGDDAHRFYDALVGKLEHDTKHVEHVQNFWGDPLTAAGSQSKDGKAAYVQVYLAGNQGDALANESVDAIRNIVE HTPPPPGVKAYVTGAAPLVTDQFEVGSKGIFKVTVITVLVILAMLLWVYRSVTAVFVLVTVIVEMAAARGIVAFLGSVGL IGLSTYATNLLTLLVIAAGTDYAIFFVGRYHEARHEGQDRETAYYTMYRGTTHVVLGSGLTVAGAVLCLRFTRLNYFQSL GIPAAIGIGVALAAALSLTPAVITVGSLFGLFDPKRQMATRGWRRIGTAIVRWPGPILVVATGVALVGLLALPGYRTNYD ARPYMPASAPANTGYTAAERHFSQARLNPELLMIETDHDMRNPADMINLERVAKAIAHLPGIAQVQSMTRPLGTPIEHTS LAFQISAGSIGSIENLQYQKERAEDLLKQADNLKDTIGILNQQYALQKQLAASTHDETQSFHDTIAIINDLRDKIANFDD FFRPVRSYFYWEKHCFDIPACFAFRSVFDALDGIDELSAQFEKLTASLDKLDAGQQKLVTLLPPQIADQEKNLALTLSNY ATNLGINAQTRANTDTATALGQAYDAAKNDDSFYLPPEAFTNPEFKRGLKLFLSPDGKAARMIISHEGDPATPEGISHIE PIRNAAKQAVKNTPLGDSNIYLAGTAATYKDIAEGAKYDLLIAGIAALSLILLIMVLITRSLVAAIVIVGTVALSLGASF GLSVLVWQDILGIKLYWICLALSVIILLAVGSDYNLLLISRFREEIHAGLNTGIIRSMAGSGAVVTSAGLVFAFTMASFV SASLLVLGQIGTTIALGLLFDTLIVRSFMTPSVAALLGRWFWWPQRVRPRPASTMLRPYGPRPAVRQLLLWEDGDPAVAP ETPSAARHSRG
Specific function: Unknown
COG id: COG2409
COG function: function code R; Predicted drug exporters of the RND superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mmpL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004707 - InterPro: IPR004869 [H]
Pfam domain/function: PF03176 MMPL [H]
EC number: NA
Molecular weight: Translated: 104995; Mature: 104864
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDQATRSVVAQTIRRLSVPILLVWVAVAAISNIAVPNLEDVAKAHNVSLNTPAAPSFQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHH AMQHIGKVFHEYDSDSAAMIVLEGDKPLGDDAHRFYDALVGKLEHDTKHVEHVQNFWGDP HHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LTAAGSQSKDGKAAYVQVYLAGNQGDALANESVDAIRNIVEHTPPPPGVKAYVTGAAPLV CCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCE TDQFEVGSKGIFKVTVITVLVILAMLLWVYRSVTAVFVLVTVIVEMAAARGIVAFLGSVG ECCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIGLSTYATNLLTLLVIAAGTDYAIFFVGRYHEARHEGQDRETAYYTMYRGTTHVVLGSG HHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHCCCCCCCEEEEEECCCEEEEECCC LTVAGAVLCLRFTRLNYFQSLGIPAAIGIGVALAAALSLTPAVITVGSLFGLFDPKRQMA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH TRGWRRIGTAIVRWPGPILVVATGVALVGLLALPGYRTNYDARPYMPASAPANTGYTAAE HHHHHHHCCHHEECCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH RHFSQARLNPELLMIETDHDMRNPADMINLERVAKAIAHLPGIAQVQSMTRPLGTPIEHT HHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC SLAFQISAGSIGSIENLQYQKERAEDLLKQADNLKDTIGILNQQYALQKQLAASTHDETQ EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHH SFHDTIAIINDLRDKIANFDDFFRPVRSYFYWEKHCFDIPACFAFRSVFDALDGIDELSA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH QFEKLTASLDKLDAGQQKLVTLLPPQIADQEKNLALTLSNYATNLGINAQTRANTDTATA HHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEEEECHHHHCCCCCCCCCCCHHHHH LGQAYDAAKNDDSFYLPPEAFTNPEFKRGLKLFLSPDGKAARMIISHEGDPATPEGISHI HHHHHHCCCCCCCEEECCHHCCCHHHHCCCEEEECCCCCEEEEEEECCCCCCCCCCHHHH EPIRNAAKQAVKNTPLGDSNIYLAGTAATYKDIAEGAKYDLLIAGIAALSLILLIMVLIT HHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH RSLVAAIVIVGTVALSLGASFGLSVLVWQDILGIKLYWICLALSVIILLAVGSDYNLLLI HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH SRFREEIHAGLNTGIIRSMAGSGAVVTSAGLVFAFTMASFVSASLLVLGQIGTTIALGLL HHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FDTLIVRSFMTPSVAALLGRWFWWPQRVRPRPASTMLRPYGPRPAVRQLLLWEDGDPAVA HHHHHHHHHCCHHHHHHHHHHHCCCHHCCCCCHHHCCCCCCCCHHHHHHHEEECCCCCCC PETPSAARHSRG CCCCCCCCCCCC >Mature Secondary Structure TTDQATRSVVAQTIRRLSVPILLVWVAVAAISNIAVPNLEDVAKAHNVSLNTPAAPSFQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHH AMQHIGKVFHEYDSDSAAMIVLEGDKPLGDDAHRFYDALVGKLEHDTKHVEHVQNFWGDP HHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LTAAGSQSKDGKAAYVQVYLAGNQGDALANESVDAIRNIVEHTPPPPGVKAYVTGAAPLV CCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCE TDQFEVGSKGIFKVTVITVLVILAMLLWVYRSVTAVFVLVTVIVEMAAARGIVAFLGSVG ECCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIGLSTYATNLLTLLVIAAGTDYAIFFVGRYHEARHEGQDRETAYYTMYRGTTHVVLGSG HHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHCCCCCCCEEEEEECCCEEEEECCC LTVAGAVLCLRFTRLNYFQSLGIPAAIGIGVALAAALSLTPAVITVGSLFGLFDPKRQMA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH TRGWRRIGTAIVRWPGPILVVATGVALVGLLALPGYRTNYDARPYMPASAPANTGYTAAE HHHHHHHCCHHEECCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH RHFSQARLNPELLMIETDHDMRNPADMINLERVAKAIAHLPGIAQVQSMTRPLGTPIEHT HHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC SLAFQISAGSIGSIENLQYQKERAEDLLKQADNLKDTIGILNQQYALQKQLAASTHDETQ EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHH SFHDTIAIINDLRDKIANFDDFFRPVRSYFYWEKHCFDIPACFAFRSVFDALDGIDELSA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH QFEKLTASLDKLDAGQQKLVTLLPPQIADQEKNLALTLSNYATNLGINAQTRANTDTATA HHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEEEECHHHHCCCCCCCCCCCHHHHH LGQAYDAAKNDDSFYLPPEAFTNPEFKRGLKLFLSPDGKAARMIISHEGDPATPEGISHI HHHHHHCCCCCCCEEECCHHCCCHHHHCCCEEEECCCCCEEEEEEECCCCCCCCCCHHHH EPIRNAAKQAVKNTPLGDSNIYLAGTAATYKDIAEGAKYDLLIAGIAALSLILLIMVLIT HHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH RSLVAAIVIVGTVALSLGASFGLSVLVWQDILGIKLYWICLALSVIILLAVGSDYNLLLI HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH SRFREEIHAGLNTGIIRSMAGSGAVVTSAGLVFAFTMASFVSASLLVLGQIGTTIALGLL HHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FDTLIVRSFMTPSVAALLGRWFWWPQRVRPRPASTMLRPYGPRPAVRQLLLWEDGDPAVA HHHHHHHHHCCHHHHHHHHHHHCCCHHCCCCCHHHCCCCCCCCHHHHHHHEEECCCCCCC PETPSAARHSRG CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]