| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is yraQ [C]
Identifier: 41409097
GI number: 41409097
Start: 3335489
End: 3336652
Strand: Direct
Name: yraQ [C]
Synonym: MAP2999
Alternate gene names: 41409097
Gene position: 3335489-3336652 (Clockwise)
Preceding gene: 41409091
Following gene: 41409099
Centisome position: 69.06
GC content: 68.47
Gene sequence:
>1164_bases ATGACGACGGTACTGTCGGCGGTCGGGCACGCCCTGGCCGTCGCCGGGTCGATGACCTGGGAAATCCTGTGGGCGCTGAT TCTGGGGTTCGCCCTGTCGGCGGTGGTGCAGGCGGTGGTGCGCCGGACCACCATCGTGGCCCTGATGGGCGACGCGCGCC CGCGCACGCTTGCGGTGTCGGCGGGACTGGGCGCGGCCTCGTCGTCGTGCTCGTACGCCGCGGTGGCGTTGGCCCGTGCG CTGTTCCGCAAGGGCGCCGACTTCACCGCCGCGATGGCCTTCGAGATCGGTTCCACCAACCTGGTGGTGGAGTTGGGCAT CATCCTGACGCTGCTGATGGGATGGCAGTTCACCGCCGCCGAGTTCGTCGGCGGGCCGTTGATGATCGTGGTGCTGGCGC TGCTGTTCCGGCTGTTCGTGCGCCCGCGGCTGGTCGACGCCGCCCGCGCGCAGGCGCAGCGGGGCATCGCCGGGTCGATG GAAGGCCATGCCGCCATGGACATGTCGGTGGCCGGCGACGGCCCGTTCTGGCGACGGCTGCTCTCCGCCGCGGGCTTCAC CGCGGTGTCGCACGTGTTCGTGATGGAGTGGCTGGCGATCCTGCGCGACCTGGTGCTGGGCTTGCTGATCGCCGGCGCGG TCGCGGCGTGGGTGCCCGAAAAGTTTTGGCAGAGCTTCTTTTTGGTGGACCACCCCGGCTGGTCGGTGCTGTGGGGACCG ATCGTGGGCCCGCTGGTGGCGATCGTGTCGTTCGTGTGCTCGATCGGCAATGTGCCGCTGGCCGCGGTGTTGTGGAACGG CGGCATCAGCTTCGGCGGCGTGATCGCGTTCATCTACGCCGACCTGCTGATCCTGCCGATCCTGAACATCTACCGCAAGT ACTACGGCACCCGGATGATGCTGACCCTGCTGGGCACGTTCTACGCCGCGATGGTCGCCGCCGGGTATCTCGTCGAATTG ATCTTCGGCACAAGCGGTCTCATTCCGGCCCAGCGTGCCGCGACGGTGGCCGAGGCGTCCGTCTCGTGGAACTACACCAC CTGGCTCAACGTCGCCTTCCTGGTGCTCGCGCTGGTCCTGATCGTTCGGTTCGTCCGCACGAACGGGCTGGCGATGGTGC GGATGATGGGCGGCTCCCCCGACCCCGCCGAGCATCGGCACTGA
Upstream 100 bases:
>100_bases CACACGGGGTGGAGTCTGACAAACGCGTCGCCGATCCGCCCCTCACTTATACCCTCCCGGGGTATACTACGCCGGGAGGG TCAGCGCAGGAGGAATCGCC
Downstream 100 bases:
>100_bases GTGCTTCAGCCGTGCCGGGCCGCGTCCCGGGCCGGGCGTCCCTAGGTTTGCGGCAGCCGCACGTCGAGCACCGCGCACCG GCCCTGGCCCGCCTCGTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Metal Ion Permease; Integral Membrane Protein; Conserved Membrane Protein Transporter; Permease Superfamily
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MTTVLSAVGHALAVAGSMTWEILWALILGFALSAVVQAVVRRTTIVALMGDARPRTLAVSAGLGAASSSCSYAAVALARA LFRKGADFTAAMAFEIGSTNLVVELGIILTLLMGWQFTAAEFVGGPLMIVVLALLFRLFVRPRLVDAARAQAQRGIAGSM EGHAAMDMSVAGDGPFWRRLLSAAGFTAVSHVFVMEWLAILRDLVLGLLIAGAVAAWVPEKFWQSFFLVDHPGWSVLWGP IVGPLVAIVSFVCSIGNVPLAAVLWNGGISFGGVIAFIYADLLILPILNIYRKYYGTRMMLTLLGTFYAAMVAAGYLVEL IFGTSGLIPAQRAATVAEASVSWNYTTWLNVAFLVLALVLIVRFVRTNGLAMVRMMGGSPDPAEHRH
Sequences:
>Translated_387_residues MTTVLSAVGHALAVAGSMTWEILWALILGFALSAVVQAVVRRTTIVALMGDARPRTLAVSAGLGAASSSCSYAAVALARA LFRKGADFTAAMAFEIGSTNLVVELGIILTLLMGWQFTAAEFVGGPLMIVVLALLFRLFVRPRLVDAARAQAQRGIAGSM EGHAAMDMSVAGDGPFWRRLLSAAGFTAVSHVFVMEWLAILRDLVLGLLIAGAVAAWVPEKFWQSFFLVDHPGWSVLWGP IVGPLVAIVSFVCSIGNVPLAAVLWNGGISFGGVIAFIYADLLILPILNIYRKYYGTRMMLTLLGTFYAAMVAAGYLVEL IFGTSGLIPAQRAATVAEASVSWNYTTWLNVAFLVLALVLIVRFVRTNGLAMVRMMGGSPDPAEHRH >Mature_386_residues TTVLSAVGHALAVAGSMTWEILWALILGFALSAVVQAVVRRTTIVALMGDARPRTLAVSAGLGAASSSCSYAAVALARAL FRKGADFTAAMAFEIGSTNLVVELGIILTLLMGWQFTAAEFVGGPLMIVVLALLFRLFVRPRLVDAARAQAQRGIAGSME GHAAMDMSVAGDGPFWRRLLSAAGFTAVSHVFVMEWLAILRDLVLGLLIAGAVAAWVPEKFWQSFFLVDHPGWSVLWGPI VGPLVAIVSFVCSIGNVPLAAVLWNGGISFGGVIAFIYADLLILPILNIYRKYYGTRMMLTLLGTFYAAMVAAGYLVELI FGTSGLIPAQRAATVAEASVSWNYTTWLNVAFLVLALVLIVRFVRTNGLAMVRMMGGSPDPAEHRH
Specific function: Unknown
COG id: COG0701
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41278; Mature: 41146
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVLSAVGHALAVAGSMTWEILWALILGFALSAVVQAVVRRTTIVALMGDARPRTLAVS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEE AGLGAASSSCSYAAVALARALFRKGADFTAAMAFEIGSTNLVVELGIILTLLMGWQFTAA CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHEEECCCCHHHHHHHHHHHHHHCCCHHHH EFVGGPLMIVVLALLFRLFVRPRLVDAARAQAQRGIAGSMEGHAAMDMSVAGDGPFWRRL HHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHEEEEECCCCHHHHHH LSAAGFTAVSHVFVMEWLAILRDLVLGLLIAGAVAAWVPEKFWQSFFLVDHPGWSVLWGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHH IVGPLVAIVSFVCSIGNVPLAAVLWNGGISFGGVIAFIYADLLILPILNIYRKYYGTRMM HHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTLLGTFYAAMVAAGYLVELIFGTSGLIPAQRAATVAEASVSWNYTTWLNVAFLVLALVL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH IVRFVRTNGLAMVRMMGGSPDPAEHRH HHHHHHCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure TTVLSAVGHALAVAGSMTWEILWALILGFALSAVVQAVVRRTTIVALMGDARPRTLAVS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEE AGLGAASSSCSYAAVALARALFRKGADFTAAMAFEIGSTNLVVELGIILTLLMGWQFTAA CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHEEECCCCHHHHHHHHHHHHHHCCCHHHH EFVGGPLMIVVLALLFRLFVRPRLVDAARAQAQRGIAGSMEGHAAMDMSVAGDGPFWRRL HHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHEEEEECCCCHHHHHH LSAAGFTAVSHVFVMEWLAILRDLVLGLLIAGAVAAWVPEKFWQSFFLVDHPGWSVLWGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHH IVGPLVAIVSFVCSIGNVPLAAVLWNGGISFGGVIAFIYADLLILPILNIYRKYYGTRMM HHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTLLGTFYAAMVAAGYLVELIFGTSGLIPAQRAATVAEASVSWNYTTWLNVAFLVLALVL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH IVRFVRTNGLAMVRMMGGSPDPAEHRH HHHHHHCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA