| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409066
Identifier: 41409066
GI number: 41409066
Start: 3303986
End: 3304756
Strand: Direct
Name: 41409066
Synonym: MAP2968
Alternate gene names: NA
Gene position: 3303986-3304756 (Clockwise)
Preceding gene: 41409055
Following gene: 41409071
Centisome position: 68.41
GC content: 70.17
Gene sequence:
>771_bases ATGGCGGAACAATCGGAAGCCGGCGCGGTGGCATCCGCGGCGGGCGGGGAGAAAGCCGACCCCGCGACGGTTTTCGCGGC GCTGGCCGAGATCATCTACCAGGGCTCGGACGCCAACGAGATGTATGCCGCCATCTGCATCGCCGCCACCCTGACGGTGC GCGGCTGCGATCACGCCAGCCTGTTGGTGCGCGAGAACGACCGCTACGTCACCGTCGGCGCCAGCGACCAGCTGGCCCGG CACATCGACGAGCTGGAACGCCGGGCCGGCGACGGCCCCTGCATCGACGCGATCGAGGAGGAGACGCCGCAGATCGACCC CGACCTGACCACGCCGTCGCTGTGGCCCAAGCTGGCCTCCGTGCTGGTCGCCGAGACCCCGGTGCGCGGTGCGATGGGCT TTCGGCTGCTGGTCGACAAGCGCAAGGGCGCGGCGCTCAACCTGTTCAGCGACACCCCCAACATGTTCGACGCCGAGTCG GCCGGCCGGGCGGCGGTGCTGGCCGCCTTCGCCAGCGTCGCCATCAACGCCGTCGCCAAGGGCGAGGACGCCGCGAGCCT GCGCCGCGGGCTGCTGTCCAACCGCGAGATCGGCAAGGCGGTCGGCATGTTGATGCTGTTGCACGAGATGACCGAGGACG AGGCGTTCGACCTGCTGCGCCGCCACTCCCAGGCGCTCAACATCAAGCTGGCCGAGGTGGCGCGCGCCGTGATCGACAAC CGCGGTCAGCTGCCACCCGAGATCGAGAACCAGCTGCCGCCCAACACCTAG
Upstream 100 bases:
>100_bases CCCGGCCAAACGGCATGTAAGGCTGGTGTCGGCGAGGAGATAATTTACGGCGTTGGGGAGCGGGTCATCCCGCCGGCACC GCAGGAAACGAGGCAGCAGC
Downstream 100 bases:
>100_bases GCCGGGCTATTCGGGCAGCCGCAGCTCGGGCTTTTCGACCTCTTCGATGTTGACGTCCTTGAAGGTGACCACCCGCACCT GCTTGACGAACCGCGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Response Regulator Receiver/ANTAR Domain-Containing Protein; Response Regulator Receiver And ANTAR Domain Protein; Two Component System Response Regulator; Two-Component System Response Regulator; Antar Domain-Containing Protein; ANTAR Domain Protein; Antar Domain Protein
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MAEQSEAGAVASAAGGEKADPATVFAALAEIIYQGSDANEMYAAICIAATLTVRGCDHASLLVRENDRYVTVGASDQLAR HIDELERRAGDGPCIDAIEEETPQIDPDLTTPSLWPKLASVLVAETPVRGAMGFRLLVDKRKGAALNLFSDTPNMFDAES AGRAAVLAAFASVAINAVAKGEDAASLRRGLLSNREIGKAVGMLMLLHEMTEDEAFDLLRRHSQALNIKLAEVARAVIDN RGQLPPEIENQLPPNT
Sequences:
>Translated_256_residues MAEQSEAGAVASAAGGEKADPATVFAALAEIIYQGSDANEMYAAICIAATLTVRGCDHASLLVRENDRYVTVGASDQLAR HIDELERRAGDGPCIDAIEEETPQIDPDLTTPSLWPKLASVLVAETPVRGAMGFRLLVDKRKGAALNLFSDTPNMFDAES AGRAAVLAAFASVAINAVAKGEDAASLRRGLLSNREIGKAVGMLMLLHEMTEDEAFDLLRRHSQALNIKLAEVARAVIDN RGQLPPEIENQLPPNT >Mature_255_residues AEQSEAGAVASAAGGEKADPATVFAALAEIIYQGSDANEMYAAICIAATLTVRGCDHASLLVRENDRYVTVGASDQLARH IDELERRAGDGPCIDAIEEETPQIDPDLTTPSLWPKLASVLVAETPVRGAMGFRLLVDKRKGAALNLFSDTPNMFDAESA GRAAVLAAFASVAINAVAKGEDAASLRRGLLSNREIGKAVGMLMLLHEMTEDEAFDLLRRHSQALNIKLAEVARAVIDNR GQLPPEIENQLPPNT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27231; Mature: 27100
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: PS50921 ANTAR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQSEAGAVASAAGGEKADPATVFAALAEIIYQGSDANEMYAAICIAATLTVRGCDHAS CCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEE LLVRENDRYVTVGASDQLARHIDELERRAGDGPCIDAIEEETPQIDPDLTTPSLWPKLAS EEEECCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHH VLVAETPVRGAMGFRLLVDKRKGAALNLFSDTPNMFDAESAGRAAVLAAFASVAINAVAK HHHHCCCCCHHCCCEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC GEDAASLRRGLLSNREIGKAVGMLMLLHEMTEDEAFDLLRRHSQALNIKLAEVARAVIDN CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RGQLPPEIENQLPPNT CCCCCCHHHCCCCCCC >Mature Secondary Structure AEQSEAGAVASAAGGEKADPATVFAALAEIIYQGSDANEMYAAICIAATLTVRGCDHAS CCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEE LLVRENDRYVTVGASDQLARHIDELERRAGDGPCIDAIEEETPQIDPDLTTPSLWPKLAS EEEECCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHH VLVAETPVRGAMGFRLLVDKRKGAALNLFSDTPNMFDAESAGRAAVLAAFASVAINAVAK HHHHCCCCCHHCCCEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC GEDAASLRRGLLSNREIGKAVGMLMLLHEMTEDEAFDLLRRHSQALNIKLAEVARAVIDN CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RGQLPPEIENQLPPNT CCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA