Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409061

Identifier: 41409061

GI number: 41409061

Start: 3297661

End: 3300285

Strand: Reverse

Name: 41409061

Synonym: MAP2963c

Alternate gene names: NA

Gene position: 3300285-3297661 (Counterclockwise)

Preceding gene: 41409062

Following gene: 41409060

Centisome position: 68.33

GC content: 63.5

Gene sequence:

>2625_bases
ATGATCAAGAAGATGGGTTATCGCTGGCGGCTGCGTGACTTGATGGCCGATCAGCAGATGTTTAAGACCACTGATCTGAT
TCCGCACCTGGTGGAGCGCGGGATCACGCTCTCACGCGAGCAGGTTTTTCGATTGGTGACACAGCCTCCTCAGCGCTTGA
GCATGGACACGTTGGTGGCGTTGTGCGACATCCTCGGATGCACACCCAATGACCTCATCGTCCTCGAGGTCGTCAACAAA
CCCGTCCGCAAGACCGCCGGCGCGGGGGGGGAGTGGTGCGCCGGCGGTCACGCCCAGAAAAACAGTCGTACGACGGCCTG
GCAAGTCATGACACGGCCACACTCGACGGCGCCGATCGCGCACGTGCGCGAGTCTTTGGTGTCGTCGGTGATCAGCGCTG
TCGGTTCGGGCATGACCCGGCAGCGAGCACAGCAGCTGCTAGTGGAAGCCAAAGGATGGTCCACGGCCAACGCCCGGCAC
CTTCACGAATATCTCGGCGAGAATCCGGGCGCCTTCACCGCGCCCACTCATGAGTGCCCGGCAGCCTTTCCCCGCCTGTT
GACCTTGCTTGCCGCGGCCGGGCACGCGGACGCGGTCAGTCTGCTGGGATGCGCGAAATGCGGTCGCACCGATCTGGCGC
TGCGGCGAAACAGCCCCGAGGGGCGCTGCTGTCCCTGGTGTGTGATCCGCACCGAACTACGGCCATGCGCGCGCTGCGGC
GAAGACGGATACATCATCGCTCGTCGTGCAGACGGCCCGGTTTGTCGTCGCTGCTACAACAAAGACCCCCAGTTCCTTCA
GGTATGCGCCGGCTGCGGACGGAAACGCCCGCCCAATGCTCGCCGCGACGACGGCACTGTGCTCTGCCAAAGGTGCAGCC
TGCCGCCCACACAATCGTGTTGCCGCTGCGGCAATGTGCGCCGGGTCCACGCCCAGACCGCAGACGGCCCGATCTGTCGG
ACCTGCTACCGATCACCAGCAAGGAAATGTGGTGTATGCGGCGAGATCGCGCAGATCCAGGCTCGCGCCACCGACACGCA
CCCCGATACCTGCGTGCGGTGCTACCGCAACATCGGCGAGTGTGTGGTCTGCGGGCGAACCCGCGCCGGCGGTAAATATC
GCGGAGGGTCGTTGCACTGCGTTACCTGCTGGCCGCACCACCCGCGGCACTGCGACAGCTGCGAAAAGCCAGGGATTGCT
TGCGCCACATGGCCATTAGGGACCGTATGCCGGGACTGCTATCACCGTCGACGCCTGCACCCGCAACCTTGCGCTAACTG
TCATCGCACCGCGGTGATGGTTGGCCGCAACCCGGACGGCCAGGACATCTGCGCCCCGTGCTGCGGGGTGGACCTCGACT
TTTCCTGCAGGACATGCGGGATAGAGGGCCTGAACTACGCCGACGGGAAGTGCACGTGCTGCGTAATGACTGACCGCGTC
AACGTCCTACTCAGCCTCGACGACGGTACGGTGGTGCCGCAGCTGCAGCCGTTGGCGGATGCTCTTTCGGCGGCCAATCC
CGAATCGGTGCAGACCTGGCTGCAAGCAAGTTCGTCTGCCCGACTGCTCGCGCAGCTAGTCGCTGAGCGCCGCGCGATCT
CCCATGAGCTCCTCGATGAACTCGACCAGGACAACGCCACCCGCTATATCCGCCAACTTTTGGTCACTACCGGGATCCTG
ACGTCGCGCCAAGAAGAGTTCGCGCAACTGCAGATCTGGGCGAGCCGCAAAATTCAACACCTTCCACCGCATCAATCCCG
TGTCGTCCGACCGTTCGCCGAATGGCGCGTCATCCGTGACGCGAGAAAACGCGCCGCACGACGCCGCTACACCATCGGCT
CAGCAGCCAACGATCGCCAAAAGATCAGCACCACCATCGCATTCTTGACCTGGCTCGATGACCAGGAAATCCCGCTGGAC
TCCGTCACCCAACTTCACCTGGACCGCTGGCTGGACGCCCATCCCACCAAACACAAATACCTGGCCGCATTCATCGGCTG
GCTGGAAAAGCAGCGCCTGACACAAGCAGAGCTCGTCGTTCCCCAACGCCGATCCCAGCTCCCGTCGCGCCTGCTCTCCG
ACGACGAACTCGAACAGCAACTCAAGCGGTGCCTCACCGATGACACACTCCCGCTCGATGTTCGCGTGGTCGGAGCGTTG
ATCAGGCTCTACGCCCCACCCCTGGTGCGCATCGCCGAACTGACCACCGACCGGTATCACACCGACGATGACGGCTCATA
TCTCACCATCGGCCGCCACCCGGTCCTGCTACCACCAACCCTGGCCCGCCTCATCGAACAACTCATCGCACGAGGCCCGG
TAAACACGCTGCTGCGCAACGGGTCTGCAGACAATCCCGCCTACCTATTGGCAGGCCGGCCGCCGAGCAGGCCCGTAAAC
CCGCGCTCCCTGCAGCAACGGCTGACGAAACACGGACTGCCGGTCATCCACGCACGCAACACCGCCATGATCACCAACGC
CGCCACACTTCCACCACCAGTCGTTGCAGAACTCTTTGGGATACACCCGACAACGGCCTACCAGTGGGCGCAGTACGCCC
AGAGCAGCTGGGCCGCCTACCTCCAGGCATGCCAATCCACGGCTCAACCCGGACTCAGATGTTGA

Upstream 100 bases:

>100_bases
CGACGTCGATCTACACCCATGTCTCTAATGAATACCGCAACAAGCTGCTGAAGGCCTCGCTGATGGGCCGTCTCGGCGAC
CACTGGGATGGAGCACCGAC

Downstream 100 bases:

>100_bases
CGCGACGAATAGCGCACCCTTCGAATACGTGCCTTCCGCCAGTGGACGCCACGTCCACGGTGGTGTTCGTCGAGGTCAAG
ACCCGCACCGGCGACGGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 874; Mature: 874

Protein sequence:

>874_residues
MIKKMGYRWRLRDLMADQQMFKTTDLIPHLVERGITLSREQVFRLVTQPPQRLSMDTLVALCDILGCTPNDLIVLEVVNK
PVRKTAGAGGEWCAGGHAQKNSRTTAWQVMTRPHSTAPIAHVRESLVSSVISAVGSGMTRQRAQQLLVEAKGWSTANARH
LHEYLGENPGAFTAPTHECPAAFPRLLTLLAAAGHADAVSLLGCAKCGRTDLALRRNSPEGRCCPWCVIRTELRPCARCG
EDGYIIARRADGPVCRRCYNKDPQFLQVCAGCGRKRPPNARRDDGTVLCQRCSLPPTQSCCRCGNVRRVHAQTADGPICR
TCYRSPARKCGVCGEIAQIQARATDTHPDTCVRCYRNIGECVVCGRTRAGGKYRGGSLHCVTCWPHHPRHCDSCEKPGIA
CATWPLGTVCRDCYHRRRLHPQPCANCHRTAVMVGRNPDGQDICAPCCGVDLDFSCRTCGIEGLNYADGKCTCCVMTDRV
NVLLSLDDGTVVPQLQPLADALSAANPESVQTWLQASSSARLLAQLVAERRAISHELLDELDQDNATRYIRQLLVTTGIL
TSRQEEFAQLQIWASRKIQHLPPHQSRVVRPFAEWRVIRDARKRAARRRYTIGSAANDRQKISTTIAFLTWLDDQEIPLD
SVTQLHLDRWLDAHPTKHKYLAAFIGWLEKQRLTQAELVVPQRRSQLPSRLLSDDELEQQLKRCLTDDTLPLDVRVVGAL
IRLYAPPLVRIAELTTDRYHTDDDGSYLTIGRHPVLLPPTLARLIEQLIARGPVNTLLRNGSADNPAYLLAGRPPSRPVN
PRSLQQRLTKHGLPVIHARNTAMITNAATLPPPVVAELFGIHPTTAYQWAQYAQSSWAAYLQACQSTAQPGLRC

Sequences:

>Translated_874_residues
MIKKMGYRWRLRDLMADQQMFKTTDLIPHLVERGITLSREQVFRLVTQPPQRLSMDTLVALCDILGCTPNDLIVLEVVNK
PVRKTAGAGGEWCAGGHAQKNSRTTAWQVMTRPHSTAPIAHVRESLVSSVISAVGSGMTRQRAQQLLVEAKGWSTANARH
LHEYLGENPGAFTAPTHECPAAFPRLLTLLAAAGHADAVSLLGCAKCGRTDLALRRNSPEGRCCPWCVIRTELRPCARCG
EDGYIIARRADGPVCRRCYNKDPQFLQVCAGCGRKRPPNARRDDGTVLCQRCSLPPTQSCCRCGNVRRVHAQTADGPICR
TCYRSPARKCGVCGEIAQIQARATDTHPDTCVRCYRNIGECVVCGRTRAGGKYRGGSLHCVTCWPHHPRHCDSCEKPGIA
CATWPLGTVCRDCYHRRRLHPQPCANCHRTAVMVGRNPDGQDICAPCCGVDLDFSCRTCGIEGLNYADGKCTCCVMTDRV
NVLLSLDDGTVVPQLQPLADALSAANPESVQTWLQASSSARLLAQLVAERRAISHELLDELDQDNATRYIRQLLVTTGIL
TSRQEEFAQLQIWASRKIQHLPPHQSRVVRPFAEWRVIRDARKRAARRRYTIGSAANDRQKISTTIAFLTWLDDQEIPLD
SVTQLHLDRWLDAHPTKHKYLAAFIGWLEKQRLTQAELVVPQRRSQLPSRLLSDDELEQQLKRCLTDDTLPLDVRVVGAL
IRLYAPPLVRIAELTTDRYHTDDDGSYLTIGRHPVLLPPTLARLIEQLIARGPVNTLLRNGSADNPAYLLAGRPPSRPVN
PRSLQQRLTKHGLPVIHARNTAMITNAATLPPPVVAELFGIHPTTAYQWAQYAQSSWAAYLQACQSTAQPGLRC
>Mature_874_residues
MIKKMGYRWRLRDLMADQQMFKTTDLIPHLVERGITLSREQVFRLVTQPPQRLSMDTLVALCDILGCTPNDLIVLEVVNK
PVRKTAGAGGEWCAGGHAQKNSRTTAWQVMTRPHSTAPIAHVRESLVSSVISAVGSGMTRQRAQQLLVEAKGWSTANARH
LHEYLGENPGAFTAPTHECPAAFPRLLTLLAAAGHADAVSLLGCAKCGRTDLALRRNSPEGRCCPWCVIRTELRPCARCG
EDGYIIARRADGPVCRRCYNKDPQFLQVCAGCGRKRPPNARRDDGTVLCQRCSLPPTQSCCRCGNVRRVHAQTADGPICR
TCYRSPARKCGVCGEIAQIQARATDTHPDTCVRCYRNIGECVVCGRTRAGGKYRGGSLHCVTCWPHHPRHCDSCEKPGIA
CATWPLGTVCRDCYHRRRLHPQPCANCHRTAVMVGRNPDGQDICAPCCGVDLDFSCRTCGIEGLNYADGKCTCCVMTDRV
NVLLSLDDGTVVPQLQPLADALSAANPESVQTWLQASSSARLLAQLVAERRAISHELLDELDQDNATRYIRQLLVTTGIL
TSRQEEFAQLQIWASRKIQHLPPHQSRVVRPFAEWRVIRDARKRAARRRYTIGSAANDRQKISTTIAFLTWLDDQEIPLD
SVTQLHLDRWLDAHPTKHKYLAAFIGWLEKQRLTQAELVVPQRRSQLPSRLLSDDELEQQLKRCLTDDTLPLDVRVVGAL
IRLYAPPLVRIAELTTDRYHTDDDGSYLTIGRHPVLLPPTLARLIEQLIARGPVNTLLRNGSADNPAYLLAGRPPSRPVN
PRSLQQRLTKHGLPVIHARNTAMITNAATLPPPVVAELFGIHPTTAYQWAQYAQSSWAAYLQACQSTAQPGLRC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 97055; Mature: 97055

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKMGYRWRLRDLMADQQMFKTTDLIPHLVERGITLSREQVFRLVTQPPQRLSMDTLVA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHCCHHHHHH
LCDILGCTPNDLIVLEVVNKPVRKTAGAGGEWCAGGHAQKNSRTTAWQVMTRPHSTAPIA
HHHHHCCCCCCEEEEHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHH
HVRESLVSSVISAVGSGMTRQRAQQLLVEAKGWSTANARHLHEYLGENPGAFTAPTHECP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCH
AAFPRLLTLLAAAGHADAVSLLGCAKCGRTDLALRRNSPEGRCCPWCVIRTELRPCARCG
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCC
EDGYIIARRADGPVCRRCYNKDPQFLQVCAGCGRKRPPNARRDDGTVLCQRCSLPPTQSC
CCCEEEEECCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCHHHH
CRCGNVRRVHAQTADGPICRTCYRSPARKCGVCGEIAQIQARATDTHPDTCVRCYRNIGE
HHCCCCEEEECCCCCCHHHHHHHHCHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCC
CVVCGRTRAGGKYRGGSLHCVTCWPHHPRHCDSCEKPGIACATWPLGTVCRDCYHRRRLH
EEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCC
PQPCANCHRTAVMVGRNPDGQDICAPCCGVDLDFSCRTCGIEGLNYADGKCTCCVMTDRV
CCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCHHCCCCCCCCCCCCEEEEEEECCE
NVLLSLDDGTVVPQLQPLADALSAANPESVQTWLQASSSARLLAQLVAERRAISHELLDE
EEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LDQDNATRYIRQLLVTTGILTSRQEEFAQLQIWASRKIQHLPPHQSRVVRPFAEWRVIRD
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
ARKRAARRRYTIGSAANDRQKISTTIAFLTWLDDQEIPLDSVTQLHLDRWLDAHPTKHKY
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCCHHHH
LAAFIGWLEKQRLTQAELVVPQRRSQLPSRLLSDDELEQQLKRCLTDDTLPLDVRVVGAL
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHH
IRLYAPPLVRIAELTTDRYHTDDDGSYLTIGRHPVLLPPTLARLIEQLIARGPVNTLLRN
HHHHCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHC
GSADNPAYLLAGRPPSRPVNPRSLQQRLTKHGLPVIHARNTAMITNAATLPPPVVAELFG
CCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCEEEECCCCCCCHHHHHHHC
IHPTTAYQWAQYAQSSWAAYLQACQSTAQPGLRC
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIKKMGYRWRLRDLMADQQMFKTTDLIPHLVERGITLSREQVFRLVTQPPQRLSMDTLVA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHCCHHHHHH
LCDILGCTPNDLIVLEVVNKPVRKTAGAGGEWCAGGHAQKNSRTTAWQVMTRPHSTAPIA
HHHHHCCCCCCEEEEHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHH
HVRESLVSSVISAVGSGMTRQRAQQLLVEAKGWSTANARHLHEYLGENPGAFTAPTHECP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCH
AAFPRLLTLLAAAGHADAVSLLGCAKCGRTDLALRRNSPEGRCCPWCVIRTELRPCARCG
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCC
EDGYIIARRADGPVCRRCYNKDPQFLQVCAGCGRKRPPNARRDDGTVLCQRCSLPPTQSC
CCCEEEEECCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCHHHH
CRCGNVRRVHAQTADGPICRTCYRSPARKCGVCGEIAQIQARATDTHPDTCVRCYRNIGE
HHCCCCEEEECCCCCCHHHHHHHHCHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCC
CVVCGRTRAGGKYRGGSLHCVTCWPHHPRHCDSCEKPGIACATWPLGTVCRDCYHRRRLH
EEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCC
PQPCANCHRTAVMVGRNPDGQDICAPCCGVDLDFSCRTCGIEGLNYADGKCTCCVMTDRV
CCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCHHCCCCCCCCCCCCEEEEEEECCE
NVLLSLDDGTVVPQLQPLADALSAANPESVQTWLQASSSARLLAQLVAERRAISHELLDE
EEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LDQDNATRYIRQLLVTTGILTSRQEEFAQLQIWASRKIQHLPPHQSRVVRPFAEWRVIRD
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
ARKRAARRRYTIGSAANDRQKISTTIAFLTWLDDQEIPLDSVTQLHLDRWLDAHPTKHKY
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCCHHHH
LAAFIGWLEKQRLTQAELVVPQRRSQLPSRLLSDDELEQQLKRCLTDDTLPLDVRVVGAL
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHH
IRLYAPPLVRIAELTTDRYHTDDDGSYLTIGRHPVLLPPTLARLIEQLIARGPVNTLLRN
HHHHCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHC
GSADNPAYLLAGRPPSRPVNPRSLQQRLTKHGLPVIHARNTAMITNAATLPPPVVAELFG
CCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCEEEECCCCCCCHHHHHHHC
IHPTTAYQWAQYAQSSWAAYLQACQSTAQPGLRC
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA