| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409061
Identifier: 41409061
GI number: 41409061
Start: 3297661
End: 3300285
Strand: Reverse
Name: 41409061
Synonym: MAP2963c
Alternate gene names: NA
Gene position: 3300285-3297661 (Counterclockwise)
Preceding gene: 41409062
Following gene: 41409060
Centisome position: 68.33
GC content: 63.5
Gene sequence:
>2625_bases ATGATCAAGAAGATGGGTTATCGCTGGCGGCTGCGTGACTTGATGGCCGATCAGCAGATGTTTAAGACCACTGATCTGAT TCCGCACCTGGTGGAGCGCGGGATCACGCTCTCACGCGAGCAGGTTTTTCGATTGGTGACACAGCCTCCTCAGCGCTTGA GCATGGACACGTTGGTGGCGTTGTGCGACATCCTCGGATGCACACCCAATGACCTCATCGTCCTCGAGGTCGTCAACAAA CCCGTCCGCAAGACCGCCGGCGCGGGGGGGGAGTGGTGCGCCGGCGGTCACGCCCAGAAAAACAGTCGTACGACGGCCTG GCAAGTCATGACACGGCCACACTCGACGGCGCCGATCGCGCACGTGCGCGAGTCTTTGGTGTCGTCGGTGATCAGCGCTG TCGGTTCGGGCATGACCCGGCAGCGAGCACAGCAGCTGCTAGTGGAAGCCAAAGGATGGTCCACGGCCAACGCCCGGCAC CTTCACGAATATCTCGGCGAGAATCCGGGCGCCTTCACCGCGCCCACTCATGAGTGCCCGGCAGCCTTTCCCCGCCTGTT GACCTTGCTTGCCGCGGCCGGGCACGCGGACGCGGTCAGTCTGCTGGGATGCGCGAAATGCGGTCGCACCGATCTGGCGC TGCGGCGAAACAGCCCCGAGGGGCGCTGCTGTCCCTGGTGTGTGATCCGCACCGAACTACGGCCATGCGCGCGCTGCGGC GAAGACGGATACATCATCGCTCGTCGTGCAGACGGCCCGGTTTGTCGTCGCTGCTACAACAAAGACCCCCAGTTCCTTCA GGTATGCGCCGGCTGCGGACGGAAACGCCCGCCCAATGCTCGCCGCGACGACGGCACTGTGCTCTGCCAAAGGTGCAGCC TGCCGCCCACACAATCGTGTTGCCGCTGCGGCAATGTGCGCCGGGTCCACGCCCAGACCGCAGACGGCCCGATCTGTCGG ACCTGCTACCGATCACCAGCAAGGAAATGTGGTGTATGCGGCGAGATCGCGCAGATCCAGGCTCGCGCCACCGACACGCA CCCCGATACCTGCGTGCGGTGCTACCGCAACATCGGCGAGTGTGTGGTCTGCGGGCGAACCCGCGCCGGCGGTAAATATC GCGGAGGGTCGTTGCACTGCGTTACCTGCTGGCCGCACCACCCGCGGCACTGCGACAGCTGCGAAAAGCCAGGGATTGCT TGCGCCACATGGCCATTAGGGACCGTATGCCGGGACTGCTATCACCGTCGACGCCTGCACCCGCAACCTTGCGCTAACTG TCATCGCACCGCGGTGATGGTTGGCCGCAACCCGGACGGCCAGGACATCTGCGCCCCGTGCTGCGGGGTGGACCTCGACT TTTCCTGCAGGACATGCGGGATAGAGGGCCTGAACTACGCCGACGGGAAGTGCACGTGCTGCGTAATGACTGACCGCGTC AACGTCCTACTCAGCCTCGACGACGGTACGGTGGTGCCGCAGCTGCAGCCGTTGGCGGATGCTCTTTCGGCGGCCAATCC CGAATCGGTGCAGACCTGGCTGCAAGCAAGTTCGTCTGCCCGACTGCTCGCGCAGCTAGTCGCTGAGCGCCGCGCGATCT CCCATGAGCTCCTCGATGAACTCGACCAGGACAACGCCACCCGCTATATCCGCCAACTTTTGGTCACTACCGGGATCCTG ACGTCGCGCCAAGAAGAGTTCGCGCAACTGCAGATCTGGGCGAGCCGCAAAATTCAACACCTTCCACCGCATCAATCCCG TGTCGTCCGACCGTTCGCCGAATGGCGCGTCATCCGTGACGCGAGAAAACGCGCCGCACGACGCCGCTACACCATCGGCT CAGCAGCCAACGATCGCCAAAAGATCAGCACCACCATCGCATTCTTGACCTGGCTCGATGACCAGGAAATCCCGCTGGAC TCCGTCACCCAACTTCACCTGGACCGCTGGCTGGACGCCCATCCCACCAAACACAAATACCTGGCCGCATTCATCGGCTG GCTGGAAAAGCAGCGCCTGACACAAGCAGAGCTCGTCGTTCCCCAACGCCGATCCCAGCTCCCGTCGCGCCTGCTCTCCG ACGACGAACTCGAACAGCAACTCAAGCGGTGCCTCACCGATGACACACTCCCGCTCGATGTTCGCGTGGTCGGAGCGTTG ATCAGGCTCTACGCCCCACCCCTGGTGCGCATCGCCGAACTGACCACCGACCGGTATCACACCGACGATGACGGCTCATA TCTCACCATCGGCCGCCACCCGGTCCTGCTACCACCAACCCTGGCCCGCCTCATCGAACAACTCATCGCACGAGGCCCGG TAAACACGCTGCTGCGCAACGGGTCTGCAGACAATCCCGCCTACCTATTGGCAGGCCGGCCGCCGAGCAGGCCCGTAAAC CCGCGCTCCCTGCAGCAACGGCTGACGAAACACGGACTGCCGGTCATCCACGCACGCAACACCGCCATGATCACCAACGC CGCCACACTTCCACCACCAGTCGTTGCAGAACTCTTTGGGATACACCCGACAACGGCCTACCAGTGGGCGCAGTACGCCC AGAGCAGCTGGGCCGCCTACCTCCAGGCATGCCAATCCACGGCTCAACCCGGACTCAGATGTTGA
Upstream 100 bases:
>100_bases CGACGTCGATCTACACCCATGTCTCTAATGAATACCGCAACAAGCTGCTGAAGGCCTCGCTGATGGGCCGTCTCGGCGAC CACTGGGATGGAGCACCGAC
Downstream 100 bases:
>100_bases CGCGACGAATAGCGCACCCTTCGAATACGTGCCTTCCGCCAGTGGACGCCACGTCCACGGTGGTGTTCGTCGAGGTCAAG ACCCGCACCGGCGACGGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 874; Mature: 874
Protein sequence:
>874_residues MIKKMGYRWRLRDLMADQQMFKTTDLIPHLVERGITLSREQVFRLVTQPPQRLSMDTLVALCDILGCTPNDLIVLEVVNK PVRKTAGAGGEWCAGGHAQKNSRTTAWQVMTRPHSTAPIAHVRESLVSSVISAVGSGMTRQRAQQLLVEAKGWSTANARH LHEYLGENPGAFTAPTHECPAAFPRLLTLLAAAGHADAVSLLGCAKCGRTDLALRRNSPEGRCCPWCVIRTELRPCARCG EDGYIIARRADGPVCRRCYNKDPQFLQVCAGCGRKRPPNARRDDGTVLCQRCSLPPTQSCCRCGNVRRVHAQTADGPICR TCYRSPARKCGVCGEIAQIQARATDTHPDTCVRCYRNIGECVVCGRTRAGGKYRGGSLHCVTCWPHHPRHCDSCEKPGIA CATWPLGTVCRDCYHRRRLHPQPCANCHRTAVMVGRNPDGQDICAPCCGVDLDFSCRTCGIEGLNYADGKCTCCVMTDRV NVLLSLDDGTVVPQLQPLADALSAANPESVQTWLQASSSARLLAQLVAERRAISHELLDELDQDNATRYIRQLLVTTGIL TSRQEEFAQLQIWASRKIQHLPPHQSRVVRPFAEWRVIRDARKRAARRRYTIGSAANDRQKISTTIAFLTWLDDQEIPLD SVTQLHLDRWLDAHPTKHKYLAAFIGWLEKQRLTQAELVVPQRRSQLPSRLLSDDELEQQLKRCLTDDTLPLDVRVVGAL IRLYAPPLVRIAELTTDRYHTDDDGSYLTIGRHPVLLPPTLARLIEQLIARGPVNTLLRNGSADNPAYLLAGRPPSRPVN PRSLQQRLTKHGLPVIHARNTAMITNAATLPPPVVAELFGIHPTTAYQWAQYAQSSWAAYLQACQSTAQPGLRC
Sequences:
>Translated_874_residues MIKKMGYRWRLRDLMADQQMFKTTDLIPHLVERGITLSREQVFRLVTQPPQRLSMDTLVALCDILGCTPNDLIVLEVVNK PVRKTAGAGGEWCAGGHAQKNSRTTAWQVMTRPHSTAPIAHVRESLVSSVISAVGSGMTRQRAQQLLVEAKGWSTANARH LHEYLGENPGAFTAPTHECPAAFPRLLTLLAAAGHADAVSLLGCAKCGRTDLALRRNSPEGRCCPWCVIRTELRPCARCG EDGYIIARRADGPVCRRCYNKDPQFLQVCAGCGRKRPPNARRDDGTVLCQRCSLPPTQSCCRCGNVRRVHAQTADGPICR TCYRSPARKCGVCGEIAQIQARATDTHPDTCVRCYRNIGECVVCGRTRAGGKYRGGSLHCVTCWPHHPRHCDSCEKPGIA CATWPLGTVCRDCYHRRRLHPQPCANCHRTAVMVGRNPDGQDICAPCCGVDLDFSCRTCGIEGLNYADGKCTCCVMTDRV NVLLSLDDGTVVPQLQPLADALSAANPESVQTWLQASSSARLLAQLVAERRAISHELLDELDQDNATRYIRQLLVTTGIL TSRQEEFAQLQIWASRKIQHLPPHQSRVVRPFAEWRVIRDARKRAARRRYTIGSAANDRQKISTTIAFLTWLDDQEIPLD SVTQLHLDRWLDAHPTKHKYLAAFIGWLEKQRLTQAELVVPQRRSQLPSRLLSDDELEQQLKRCLTDDTLPLDVRVVGAL IRLYAPPLVRIAELTTDRYHTDDDGSYLTIGRHPVLLPPTLARLIEQLIARGPVNTLLRNGSADNPAYLLAGRPPSRPVN PRSLQQRLTKHGLPVIHARNTAMITNAATLPPPVVAELFGIHPTTAYQWAQYAQSSWAAYLQACQSTAQPGLRC >Mature_874_residues MIKKMGYRWRLRDLMADQQMFKTTDLIPHLVERGITLSREQVFRLVTQPPQRLSMDTLVALCDILGCTPNDLIVLEVVNK PVRKTAGAGGEWCAGGHAQKNSRTTAWQVMTRPHSTAPIAHVRESLVSSVISAVGSGMTRQRAQQLLVEAKGWSTANARH LHEYLGENPGAFTAPTHECPAAFPRLLTLLAAAGHADAVSLLGCAKCGRTDLALRRNSPEGRCCPWCVIRTELRPCARCG EDGYIIARRADGPVCRRCYNKDPQFLQVCAGCGRKRPPNARRDDGTVLCQRCSLPPTQSCCRCGNVRRVHAQTADGPICR TCYRSPARKCGVCGEIAQIQARATDTHPDTCVRCYRNIGECVVCGRTRAGGKYRGGSLHCVTCWPHHPRHCDSCEKPGIA CATWPLGTVCRDCYHRRRLHPQPCANCHRTAVMVGRNPDGQDICAPCCGVDLDFSCRTCGIEGLNYADGKCTCCVMTDRV NVLLSLDDGTVVPQLQPLADALSAANPESVQTWLQASSSARLLAQLVAERRAISHELLDELDQDNATRYIRQLLVTTGIL TSRQEEFAQLQIWASRKIQHLPPHQSRVVRPFAEWRVIRDARKRAARRRYTIGSAANDRQKISTTIAFLTWLDDQEIPLD SVTQLHLDRWLDAHPTKHKYLAAFIGWLEKQRLTQAELVVPQRRSQLPSRLLSDDELEQQLKRCLTDDTLPLDVRVVGAL IRLYAPPLVRIAELTTDRYHTDDDGSYLTIGRHPVLLPPTLARLIEQLIARGPVNTLLRNGSADNPAYLLAGRPPSRPVN PRSLQQRLTKHGLPVIHARNTAMITNAATLPPPVVAELFGIHPTTAYQWAQYAQSSWAAYLQACQSTAQPGLRC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97055; Mature: 97055
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKMGYRWRLRDLMADQQMFKTTDLIPHLVERGITLSREQVFRLVTQPPQRLSMDTLVA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHCCHHHHHH LCDILGCTPNDLIVLEVVNKPVRKTAGAGGEWCAGGHAQKNSRTTAWQVMTRPHSTAPIA HHHHHCCCCCCEEEEHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHH HVRESLVSSVISAVGSGMTRQRAQQLLVEAKGWSTANARHLHEYLGENPGAFTAPTHECP HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCH AAFPRLLTLLAAAGHADAVSLLGCAKCGRTDLALRRNSPEGRCCPWCVIRTELRPCARCG HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCC EDGYIIARRADGPVCRRCYNKDPQFLQVCAGCGRKRPPNARRDDGTVLCQRCSLPPTQSC CCCEEEEECCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCHHHH CRCGNVRRVHAQTADGPICRTCYRSPARKCGVCGEIAQIQARATDTHPDTCVRCYRNIGE HHCCCCEEEECCCCCCHHHHHHHHCHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCC CVVCGRTRAGGKYRGGSLHCVTCWPHHPRHCDSCEKPGIACATWPLGTVCRDCYHRRRLH EEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCC PQPCANCHRTAVMVGRNPDGQDICAPCCGVDLDFSCRTCGIEGLNYADGKCTCCVMTDRV CCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCHHCCCCCCCCCCCCEEEEEEECCE NVLLSLDDGTVVPQLQPLADALSAANPESVQTWLQASSSARLLAQLVAERRAISHELLDE EEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LDQDNATRYIRQLLVTTGILTSRQEEFAQLQIWASRKIQHLPPHQSRVVRPFAEWRVIRD HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH ARKRAARRRYTIGSAANDRQKISTTIAFLTWLDDQEIPLDSVTQLHLDRWLDAHPTKHKY HHHHHHHHHCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCCHHHH LAAFIGWLEKQRLTQAELVVPQRRSQLPSRLLSDDELEQQLKRCLTDDTLPLDVRVVGAL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHH IRLYAPPLVRIAELTTDRYHTDDDGSYLTIGRHPVLLPPTLARLIEQLIARGPVNTLLRN HHHHCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHC GSADNPAYLLAGRPPSRPVNPRSLQQRLTKHGLPVIHARNTAMITNAATLPPPVVAELFG CCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCEEEECCCCCCCHHHHHHHC IHPTTAYQWAQYAQSSWAAYLQACQSTAQPGLRC CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIKKMGYRWRLRDLMADQQMFKTTDLIPHLVERGITLSREQVFRLVTQPPQRLSMDTLVA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHCCHHHHHH LCDILGCTPNDLIVLEVVNKPVRKTAGAGGEWCAGGHAQKNSRTTAWQVMTRPHSTAPIA HHHHHCCCCCCEEEEHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHH HVRESLVSSVISAVGSGMTRQRAQQLLVEAKGWSTANARHLHEYLGENPGAFTAPTHECP HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCH AAFPRLLTLLAAAGHADAVSLLGCAKCGRTDLALRRNSPEGRCCPWCVIRTELRPCARCG HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCC EDGYIIARRADGPVCRRCYNKDPQFLQVCAGCGRKRPPNARRDDGTVLCQRCSLPPTQSC CCCEEEEECCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCHHHH CRCGNVRRVHAQTADGPICRTCYRSPARKCGVCGEIAQIQARATDTHPDTCVRCYRNIGE HHCCCCEEEECCCCCCHHHHHHHHCHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCC CVVCGRTRAGGKYRGGSLHCVTCWPHHPRHCDSCEKPGIACATWPLGTVCRDCYHRRRLH EEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCC PQPCANCHRTAVMVGRNPDGQDICAPCCGVDLDFSCRTCGIEGLNYADGKCTCCVMTDRV CCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCHHCCCCCCCCCCCCEEEEEEECCE NVLLSLDDGTVVPQLQPLADALSAANPESVQTWLQASSSARLLAQLVAERRAISHELLDE EEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LDQDNATRYIRQLLVTTGILTSRQEEFAQLQIWASRKIQHLPPHQSRVVRPFAEWRVIRD HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH ARKRAARRRYTIGSAANDRQKISTTIAFLTWLDDQEIPLDSVTQLHLDRWLDAHPTKHKY HHHHHHHHHCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCCHHHH LAAFIGWLEKQRLTQAELVVPQRRSQLPSRLLSDDELEQQLKRCLTDDTLPLDVRVVGAL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHH IRLYAPPLVRIAELTTDRYHTDDDGSYLTIGRHPVLLPPTLARLIEQLIARGPVNTLLRN HHHHCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHC GSADNPAYLLAGRPPSRPVNPRSLQQRLTKHGLPVIHARNTAMITNAATLPPPVVAELFG CCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCEEEECCCCCCCHHHHHHHC IHPTTAYQWAQYAQSSWAAYLQACQSTAQPGLRC CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA