| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is efpA_2
Identifier: 41409013
GI number: 41409013
Start: 3246435
End: 3248051
Strand: Reverse
Name: efpA_2
Synonym: MAP2915c
Alternate gene names: 41409013
Gene position: 3248051-3246435 (Counterclockwise)
Preceding gene: 41409014
Following gene: 41409012
Centisome position: 67.25
GC content: 69.45
Gene sequence:
>1617_bases ATGACGGCTCTCAACGACTCAGAGCGCGCGGTCCAGAACTGGACATCTGCACGCCCCGATCGTCCGGCCCCGGTGCGCAG CACGCCGCCGGCGGAGACCGCCCCCAAGCCCGCGGCGGAGACCGCCGTAAAGCGGACGAGCAAGTACTACCCGGCGTGGC TGCCGTCGCGCCGCTTCATCGCCGCCGTCATCGCCATCGGCGGCATGCAGCTGTTGGCCACGATGGACAGCACCGTGGCG ATCGTCGCGCTGCCCCGGATCCAGAACGAGCTCAGTCTCTCCGACGCCGGCCGCAGCTGGGTGATCACCGCCTACGTGCT GACGTTCGGCGGGCTGATGCTGCTCGGCGGCCGGCTCGGCGACACCATCGGGCGCAAACGCACCTTCATCGTCGGCGTCG CGCTGTTCACCATCTCCTCGGTGCTGTGCGCGGTCGCCTGGGACGAGGCGACCATGGTGATCGCCCGGCTCTCGCAGGGG GTCGGGTCGGCCATCGCCTCACCGACGGGCCTGGCGCTGGTCGCCACCACCTTCCCCAAGGGGCCCGCCCGTAACTTCGC GACGGCGGTGTTCGCCGCGATGACGGCGGTCGGCTCGGTGATGGGCCTGGTGGTCGGCGGGGCGCTGACCGAGGTGTCCT GGCGGCTGGCGTTTTTGGTGAACGTGCCGATCGGGCTGGTGATGATGTACCTGGCCCGCACCGCGCTGCGCGAGACCAAC CGCGAGCGGATGAAACTGGACGCCACCGGCGCCGTGCTGGCCACCCTGGCCTGCACCGCCGCCGTGTTCGCCTTCTCGAT GGGCCCGGAGAAGGGCTGGATCTCGCTGACCACCATCAGCTCCGGTGTGGTCGCGCTGGGCGCCGCCCTGGCCTTCGTCA TCGTGGAGCGCACGGCGGAAAACCCGGTGGTGCCGTTCGACCTGTTCCGCGACCGCAACCGGCTGGTCACCTTCATCGCG ATCTTCTTGGCCGGCGGCGTCATGTTCACCCTGACCGTGTGCATCGGCCTGTACGTGCAGGACATCCTCGGCTACAGCGC GCTGCGCGCCGGGGTGGGCTTCATCCCGTTCGTCATCGCGATGGGCATCGGTCTGGGCGTCTCCTCGCAACTGGTGGCGC GGTTCTCGCCGCGGGTGCTGACTATCGCCGGCGGCTACCTGCTGGTGCTCGCCATGCTCTACGGCTGGTGGTGCATGCAC CGCGGCGTTCCCTATTTCCCGAACCTGGTACTGCCCATCGTGGTGGGCGGCATCGGCATCGGCATGGCCGTCGTCCCGCT GACCCTGTCGGCCATCGCCGGCGTGGGTTTCGACCAGATCGGCCCGGTATCCGCGGTCACGCTGATGCTGCAGAGCCTGG GCGGACCGCTGGTGCTGGCCGTCATCCAGGCCGTGATCACCTCGCGCACACTGTATCTGGGCGGCACCACCGGCCCGGTG AAGACCATGAACGACGCCCAGTTGCAGGCGCTCGACCACGGCTACACCTACGGGCTGCTGTGGGTCGCCGGGGCGGCCGT CATCGTGGGTGCCGCGGCGCTGTTCATCGGCTACACACCCGAGCAGGTCGCGCACGCCCAGGAGGTCAAGGAAGCGATGG ACGCCGGGGAGCTCTGA
Upstream 100 bases:
>100_bases TCGTGCCGAAGGTATCCGACCTCCCGCGATCATCGTGATCGGCGCGGTGGCGGCTTTCGGGGTTTAAACGGTTCTTAAGA TTACTGTAAGGTAACCCTTT
Downstream 100 bases:
>100_bases CCCGGCCCAGTGGTTGCGGCGCAACCAGTTCCGTGATTTTCGTCGGCCGGTGATTGGCCGGGTGTCCGGCGGGGTAGTGC ATCAAGCGGTGCCTTCGGCT
Product: EfpA_2
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: Efflux protein A [H]
Number of amino acids: Translated: 538; Mature: 537
Protein sequence:
>538_residues MTALNDSERAVQNWTSARPDRPAPVRSTPPAETAPKPAAETAVKRTSKYYPAWLPSRRFIAAVIAIGGMQLLATMDSTVA IVALPRIQNELSLSDAGRSWVITAYVLTFGGLMLLGGRLGDTIGRKRTFIVGVALFTISSVLCAVAWDEATMVIARLSQG VGSAIASPTGLALVATTFPKGPARNFATAVFAAMTAVGSVMGLVVGGALTEVSWRLAFLVNVPIGLVMMYLARTALRETN RERMKLDATGAVLATLACTAAVFAFSMGPEKGWISLTTISSGVVALGAALAFVIVERTAENPVVPFDLFRDRNRLVTFIA IFLAGGVMFTLTVCIGLYVQDILGYSALRAGVGFIPFVIAMGIGLGVSSQLVARFSPRVLTIAGGYLLVLAMLYGWWCMH RGVPYFPNLVLPIVVGGIGIGMAVVPLTLSAIAGVGFDQIGPVSAVTLMLQSLGGPLVLAVIQAVITSRTLYLGGTTGPV KTMNDAQLQALDHGYTYGLLWVAGAAVIVGAAALFIGYTPEQVAHAQEVKEAMDAGEL
Sequences:
>Translated_538_residues MTALNDSERAVQNWTSARPDRPAPVRSTPPAETAPKPAAETAVKRTSKYYPAWLPSRRFIAAVIAIGGMQLLATMDSTVA IVALPRIQNELSLSDAGRSWVITAYVLTFGGLMLLGGRLGDTIGRKRTFIVGVALFTISSVLCAVAWDEATMVIARLSQG VGSAIASPTGLALVATTFPKGPARNFATAVFAAMTAVGSVMGLVVGGALTEVSWRLAFLVNVPIGLVMMYLARTALRETN RERMKLDATGAVLATLACTAAVFAFSMGPEKGWISLTTISSGVVALGAALAFVIVERTAENPVVPFDLFRDRNRLVTFIA IFLAGGVMFTLTVCIGLYVQDILGYSALRAGVGFIPFVIAMGIGLGVSSQLVARFSPRVLTIAGGYLLVLAMLYGWWCMH RGVPYFPNLVLPIVVGGIGIGMAVVPLTLSAIAGVGFDQIGPVSAVTLMLQSLGGPLVLAVIQAVITSRTLYLGGTTGPV KTMNDAQLQALDHGYTYGLLWVAGAAVIVGAAALFIGYTPEQVAHAQEVKEAMDAGEL >Mature_537_residues TALNDSERAVQNWTSARPDRPAPVRSTPPAETAPKPAAETAVKRTSKYYPAWLPSRRFIAAVIAIGGMQLLATMDSTVAI VALPRIQNELSLSDAGRSWVITAYVLTFGGLMLLGGRLGDTIGRKRTFIVGVALFTISSVLCAVAWDEATMVIARLSQGV GSAIASPTGLALVATTFPKGPARNFATAVFAAMTAVGSVMGLVVGGALTEVSWRLAFLVNVPIGLVMMYLARTALRETNR ERMKLDATGAVLATLACTAAVFAFSMGPEKGWISLTTISSGVVALGAALAFVIVERTAENPVVPFDLFRDRNRLVTFIAI FLAGGVMFTLTVCIGLYVQDILGYSALRAGVGFIPFVIAMGIGLGVSSQLVARFSPRVLTIAGGYLLVLAMLYGWWCMHR GVPYFPNLVLPIVVGGIGIGMAVVPLTLSAIAGVGFDQIGPVSAVTLMLQSLGGPLVLAVIQAVITSRTLYLGGTTGPVK TMNDAQLQALDHGYTYGLLWVAGAAVIVGAAALFIGYTPEQVAHAQEVKEAMDAGEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1788710, Length=461, Percent_Identity=26.6811279826464, Blast_Score=129, Evalue=5e-31, Organism=Escherichia coli, GI1790195, Length=408, Percent_Identity=27.4509803921569, Blast_Score=119, Evalue=5e-28, Organism=Escherichia coli, GI1789042, Length=449, Percent_Identity=26.2806236080178, Blast_Score=115, Evalue=7e-27, Organism=Escherichia coli, GI87081983, Length=367, Percent_Identity=26.4305177111717, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1788392, Length=334, Percent_Identity=26.0479041916168, Blast_Score=83, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6323520, Length=368, Percent_Identity=23.9130434782609, Blast_Score=98, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6324954, Length=305, Percent_Identity=24.5901639344262, Blast_Score=84, Evalue=8e-17, Organism=Saccharomyces cerevisiae, GI6323935, Length=384, Percent_Identity=23.1770833333333, Blast_Score=77, Evalue=8e-15, Organism=Saccharomyces cerevisiae, GI6323735, Length=318, Percent_Identity=25.7861635220126, Blast_Score=76, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6325455, Length=139, Percent_Identity=33.0935251798561, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 56398; Mature: 56267
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALNDSERAVQNWTSARPDRPAPVRSTPPAETAPKPAAETAVKRTSKYYPAWLPSRRFI CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHH AAVIAIGGMQLLATMDSTVAIVALPRIQNELSLSDAGRSWVITAYVLTFGGLMLLGGRLG HHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH DTIGRKRTFIVGVALFTISSVLCAVAWDEATMVIARLSQGVGSAIASPTGLALVATTFPK HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC GPARNFATAVFAAMTAVGSVMGLVVGGALTEVSWRLAFLVNVPIGLVMMYLARTALRETN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC RERMKLDATGAVLATLACTAAVFAFSMGPEKGWISLTTISSGVVALGAALAFVIVERTAE HHHEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHCHHHHHHHHHHHHHHHHCCC NPVVPFDLFRDRNRLVTFIAIFLAGGVMFTLTVCIGLYVQDILGYSALRAGVGFIPFVIA CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH MGIGLGVSSQLVARFSPRVLTIAGGYLLVLAMLYGWWCMHRGVPYFPNLVLPIVVGGIGI HHHCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH GMAVVPLTLSAIAGVGFDQIGPVSAVTLMLQSLGGPLVLAVIQAVITSRTLYLGGTTGPV HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCCCCC KTMNDAQLQALDHGYTYGLLWVAGAAVIVGAAALFIGYTPEQVAHAQEVKEAMDAGEL CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TALNDSERAVQNWTSARPDRPAPVRSTPPAETAPKPAAETAVKRTSKYYPAWLPSRRFI CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHH AAVIAIGGMQLLATMDSTVAIVALPRIQNELSLSDAGRSWVITAYVLTFGGLMLLGGRLG HHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH DTIGRKRTFIVGVALFTISSVLCAVAWDEATMVIARLSQGVGSAIASPTGLALVATTFPK HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC GPARNFATAVFAAMTAVGSVMGLVVGGALTEVSWRLAFLVNVPIGLVMMYLARTALRETN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC RERMKLDATGAVLATLACTAAVFAFSMGPEKGWISLTTISSGVVALGAALAFVIVERTAE HHHEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHCHHHHHHHHHHHHHHHHCCC NPVVPFDLFRDRNRLVTFIAIFLAGGVMFTLTVCIGLYVQDILGYSALRAGVGFIPFVIA CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH MGIGLGVSSQLVARFSPRVLTIAGGYLLVLAMLYGWWCMHRGVPYFPNLVLPIVVGGIGI HHHCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH GMAVVPLTLSAIAGVGFDQIGPVSAVTLMLQSLGGPLVLAVIQAVITSRTLYLGGTTGPV HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCCCCC KTMNDAQLQALDHGYTYGLLWVAGAAVIVGAAALFIGYTPEQVAHAQEVKEAMDAGEL CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]