Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409006

Identifier: 41409006

GI number: 41409006

Start: 3239937

End: 3240245

Strand: Reverse

Name: 41409006

Synonym: MAP2908c

Alternate gene names: NA

Gene position: 3240245-3239937 (Counterclockwise)

Preceding gene: 41409007

Following gene: 41409005

Centisome position: 67.09

GC content: 66.99

Gene sequence:

>309_bases
GTGCGAACGTGTGTCGGGTGCCGGAAGCGAGAGTTGGCCGTCGAACTGCTTCGCGTGGTGGCTGTGCCCACCGGGAACGG
CGAATTCGCCGCGATCGTTGACACAGCCGGTAACCTGCCGGGGCGGGGTGCGTGGCTGCATCCCGCGCCGCAGTGCGCCC
AGCAGGCGATCCGGCGGCGTGCTTTCACCAAAGCGCTGCGGATCACCGGTTCACCGGACACCTCCGCGGTGGTCGAGCAC
ATAGAGTCCCTCCATGCGCCCGAGCGCCCGGCGACAGAACAGGTAGCAAAGAACATGAGCACACCGTGA

Upstream 100 bases:

>100_bases
CCGGGACACTCCGGGCGCGGCCGGACAGGCTCGGGTGGTGCTGACCATCGATTCGGTGACGCTAGACTGAGCCGTGATCC
AGCGTGAGCCTTCGGGACCC

Downstream 100 bases:

>100_bases
AGTCCCGATGACAATGCGTCATAGCTGAACACGAGGCGCGGCCCCACGACTGTCGCCTCATAGACAGGAGAAGTAGTGGC
AGGTAAGGCCCGCGTACACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MRTCVGCRKRELAVELLRVVAVPTGNGEFAAIVDTAGNLPGRGAWLHPAPQCAQQAIRRRAFTKALRITGSPDTSAVVEH
IESLHAPERPATEQVAKNMSTP

Sequences:

>Translated_102_residues
MRTCVGCRKRELAVELLRVVAVPTGNGEFAAIVDTAGNLPGRGAWLHPAPQCAQQAIRRRAFTKALRITGSPDTSAVVEH
IESLHAPERPATEQVAKNMSTP
>Mature_102_residues
MRTCVGCRKRELAVELLRVVAVPTGNGEFAAIVDTAGNLPGRGAWLHPAPQCAQQAIRRRAFTKALRITGSPDTSAVVEH
IESLHAPERPATEQVAKNMSTP

Specific function: Unknown

COG id: COG2740

COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10954; Mature: 10954

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTCVGCRKRELAVELLRVVAVPTGNGEFAAIVDTAGNLPGRGAWLHPAPQCAQQAIRRR
CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
AFTKALRITGSPDTSAVVEHIESLHAPERPATEQVAKNMSTP
HHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure
MRTCVGCRKRELAVELLRVVAVPTGNGEFAAIVDTAGNLPGRGAWLHPAPQCAQQAIRRR
CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
AFTKALRITGSPDTSAVVEHIESLHAPERPATEQVAKNMSTP
HHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA