| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408984
Identifier: 41408984
GI number: 41408984
Start: 3215560
End: 3216468
Strand: Reverse
Name: 41408984
Synonym: MAP2886c
Alternate gene names: NA
Gene position: 3216468-3215560 (Counterclockwise)
Preceding gene: 41408985
Following gene: 41408983
Centisome position: 66.6
GC content: 69.86
Gene sequence:
>909_bases ATGGTGACCATCGACAACCAGGCGGCGGGTCCGCACGACGCGTCGGTGGACCACGAGCGGCTGGTTCTCGAGGCCCGCGA CGTGGACTTCGACTGGGCGCAGCTGCCGTTCCACTACGTGCCCGGCGAGCCGTTCGCCACCCATGTGCTCAACGTGCTGC ACCTGCAGCTGCCCGCCGGCGAGCAGTTCTTCGTCGAGGTGTTCAAGCAGGCGTTGCCGCTGATCCGGGACGATCAGCTG CGGCTGGACGTCCAGGGATTCATCGGGCAGGAGGGCGTGCACTCTCGGGCGCACGCCAATGTGCTGGCCCACTTCGCCGC CCGGGGCATCGACCTGCGCCCCTACACCGGTCAGATCGAGTGGCTGTTCGGCACGCTGCTGGGGCCCCGCCCCAATTGGA GCCCGCGCCGCCGGCAGAGCTGGCTGCTCGAGCAGATCTCCCTGGTGTCGGCCATCGAGCACTACACCGCCATCCTCGGC GAGTGGATTCTCGACTCGCCGGCCCACGACCGGATCGGCACCGATCCGGTGATGCTGGACATGCTGCGCTGGCACGGCGC CGAAGAGGTCGAACACAAGGCGGTGGCCTTCGACACCATGAAGCACCTGCGGGCCGGCTACTGGCGGCAGGTGCGCACCC AGCTGGTGGTGACGCCGGCCATGCTGCTGTTGTGGATCCGCGGCGTGCGGTTCATGTATTCGCGGGATCCCTATCTGCCG CCGCACACCAAACCGCGCTGGCGGGACTACTTCCGGGCCGCGCGGCGCGGACTGGTGCCCGGGCCGCTGCGGTTCGTGCG GGCGGTCGCCAACTACTACCGGCCGGGCTTTCACCCCTCGCAGCTCGGCGGGCTGCAGCGGGCCGTCGACTACCTGGCCG TCTCGCCCGCCGCCCGGGCCTCGCACTGA
Upstream 100 bases:
>100_bases CTTGTGCCGGGCGACGCCCGCGGCGCGACGGGGTCGCCGGCTGCCGACGACGGCGCAACGCTGAGGTAATGCCGAGGTAA TGCCGAGGTAGGGGGCCATC
Downstream 100 bases:
>100_bases CCGATGACCGTCACGTCGACCATCACCGCCGACGACGGTGTCACCCTGGCGGTGCACCGCTACACCGACATCGACCCGGC GCGCCCAACCATCTTGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase-Like Protein; FF Domain-Containing Protein; FF Domain Protein; Conserved Protein UCP; Phthalate 4 5-Dioxygenase; Metal-Dependent Hydrolase-Like; Metal Hydrolase
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MVTIDNQAAGPHDASVDHERLVLEARDVDFDWAQLPFHYVPGEPFATHVLNVLHLQLPAGEQFFVEVFKQALPLIRDDQL RLDVQGFIGQEGVHSRAHANVLAHFAARGIDLRPYTGQIEWLFGTLLGPRPNWSPRRRQSWLLEQISLVSAIEHYTAILG EWILDSPAHDRIGTDPVMLDMLRWHGAEEVEHKAVAFDTMKHLRAGYWRQVRTQLVVTPAMLLLWIRGVRFMYSRDPYLP PHTKPRWRDYFRAARRGLVPGPLRFVRAVANYYRPGFHPSQLGGLQRAVDYLAVSPAARASH
Sequences:
>Translated_302_residues MVTIDNQAAGPHDASVDHERLVLEARDVDFDWAQLPFHYVPGEPFATHVLNVLHLQLPAGEQFFVEVFKQALPLIRDDQL RLDVQGFIGQEGVHSRAHANVLAHFAARGIDLRPYTGQIEWLFGTLLGPRPNWSPRRRQSWLLEQISLVSAIEHYTAILG EWILDSPAHDRIGTDPVMLDMLRWHGAEEVEHKAVAFDTMKHLRAGYWRQVRTQLVVTPAMLLLWIRGVRFMYSRDPYLP PHTKPRWRDYFRAARRGLVPGPLRFVRAVANYYRPGFHPSQLGGLQRAVDYLAVSPAARASH >Mature_302_residues MVTIDNQAAGPHDASVDHERLVLEARDVDFDWAQLPFHYVPGEPFATHVLNVLHLQLPAGEQFFVEVFKQALPLIRDDQL RLDVQGFIGQEGVHSRAHANVLAHFAARGIDLRPYTGQIEWLFGTLLGPRPNWSPRRRQSWLLEQISLVSAIEHYTAILG EWILDSPAHDRIGTDPVMLDMLRWHGAEEVEHKAVAFDTMKHLRAGYWRQVRTQLVVTPAMLLLWIRGVRFMYSRDPYLP PHTKPRWRDYFRAARRGLVPGPLRFVRAVANYYRPGFHPSQLGGLQRAVDYLAVSPAARASH
Specific function: Unknown
COG id: COG3687
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34602; Mature: 34602
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTIDNQAAGPHDASVDHERLVLEARDVDFDWAQLPFHYVPGEPFATHVLNVLHLQLPAG CEEECCCCCCCCCCCCCHHHEEEEECCCCCCHHHCCEEECCCCHHHHHHHHHHHHCCCCC EQFFVEVFKQALPLIRDDQLRLDVQGFIGQEGVHSRAHANVLAHFAARGIDLRPYTGQIE HHHHHHHHHHHCCCCCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHH WLFGTLLGPRPNWSPRRRQSWLLEQISLVSAIEHYTAILGEWILDSPAHDRIGTDPVMLD HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH MLRWHGAEEVEHKAVAFDTMKHLRAGYWRQVRTQLVVTPAMLLLWIRGVRFMYSRDPYLP HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PHTKPRWRDYFRAARRGLVPGPLRFVRAVANYYRPGFHPSQLGGLQRAVDYLAVSPAARA CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHC SH CC >Mature Secondary Structure MVTIDNQAAGPHDASVDHERLVLEARDVDFDWAQLPFHYVPGEPFATHVLNVLHLQLPAG CEEECCCCCCCCCCCCCHHHEEEEECCCCCCHHHCCEEECCCCHHHHHHHHHHHHCCCCC EQFFVEVFKQALPLIRDDQLRLDVQGFIGQEGVHSRAHANVLAHFAARGIDLRPYTGQIE HHHHHHHHHHHCCCCCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHH WLFGTLLGPRPNWSPRRRQSWLLEQISLVSAIEHYTAILGEWILDSPAHDRIGTDPVMLD HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH MLRWHGAEEVEHKAVAFDTMKHLRAGYWRQVRTQLVVTPAMLLLWIRGVRFMYSRDPYLP HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PHTKPRWRDYFRAARRGLVPGPLRFVRAVANYYRPGFHPSQLGGLQRAVDYLAVSPAARA CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHC SH CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA