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The map label for this gene is 41408978

Identifier: 41408978

GI number: 41408978

Start: 3208451

End: 3209806

Strand: Direct

Name: 41408978

Synonym: MAP2880

Alternate gene names: NA

Gene position: 3208451-3209806 (Clockwise)

Preceding gene: 41408973

Following gene: 41408981

Centisome position: 66.43

GC content: 69.91

Gene sequence:

>1356_bases
ATGCATTCGATCGAAGTACCGGCCGAGGTGCGCGCGGCCCTGGACGCGCTGGACGCCGCCGACGCGGCGATCCGCGCGCT
GGACTTCGACGCCCTGCATCCCGTCGTCCGGCTTCGCGCGCTCGAACGGATGGAGGCCTCGCGGCGGCGGCAGATCGCGG
TCAGTCACGGTGTGATCGCCGGTTTGGCCGGCGAGGGCCCGGGCAACGTGGGCGGCCCGGTGCATAAGGTCATCGCCGAC
CGCCTGCGGATCAGTTACGCCGAGGCGTGCCGGCGGCTTCGGGAAGCCAAGCAGCTGTCGCCGCGCCTGACGCTGACCGG
CCAGGAATTGCCACCCGAATTGCCGGCCACCGCCGGGGTGTGGCGCGAGGGCATGCTCGACGGGCAGCACCTGCGGGTGA
TCGAGAAGTTCGTTCGCGACCTTCCCGAGACGACGCCCGTCCGCGCGCTGGAAGAAGCGGAGCGGTTTCTGGCCCACCAG
GCCACACTGTTGCGGCCCGACCAGCTGGAAAAGGTCGCGCACCAGTGCGCGTTGCGCATCAACCCCGACGGGAAGTTCTC
CGACGCCGACCGTGCCCGCCAGCGCGGCTTCACCTGGTGCGGCCAGCGGGCCGACGGGATGAGCTTCGGAAAGCTTTGGG
CCTCACCGGAATTGCGCGCCAATCTGGACGCGTGGCTGGCCCGGTTCGCGGCCCCCGGCATGTGCAACCCGGACGACGAG
GCCCCCTGCGTCGCCGGCGAACCCGACGAGGAGTCCGCCACCAAGGACTCGCGCACTCCCGCCCAGCGCCAGCACGACGC
ACTCAACGCCCTGTTGCGCGGCCGGTTGGGTGATCCGAAGCTCGGTCTGCACAACGGCTTACCGGTCACGGTCGTCGTGT
CGACCACGCTGCGAGAGCTGACGACGGGCGCCGGCCGGGCGGTGACGGGCGGCGGGACGCTGCTGCCGATGCGCGACGTG
ATCCGCATGGCGCGTCACGCGTATCACTACCTGGCGGTGTTCGACGAGCACTCGAGCCGGCCGCTGTATCTCGGCCGGAG
CCGCCGCGTCGCCTCGCCGGACCAGCGCGTGGTGCTCTACGCGAAAGACCGCGGCTGCACCCACCCCGGCTGCGACGCAC
CCGGCTATTGGTGCGAGGTGCATCATCTCAACGAGTGGGCCACGGGCGGCTTGACCGATGTCGACAACCTCACCTTCGCC
TGCGGGCCGCATCACAAACTGATCGAAAATGGTTGGCGGACAAAGAAACTCGCAGACGGACGCACGGCGTGGATCCCGCC
ACCGCAGTGGGACCGCGGCGCGCGCACCAACGACTTTCACCATCCGGAGCGCGATTTCGACGGCGAGGACCCGTGA

Upstream 100 bases:

>100_bases
GGGGGCGGGCTTCGAGCCGGGGTTGTCCACAGTTCGCGGTTCATCCACAGCTGCGGCACTGTCCATTTCCCCGCGCCCGG
ATCCGCCATAAGATTCGAAC

Downstream 100 bases:

>100_bases
GGTCCCTACTTCTTGAACCGCCCGGCGAAACCGCGCAGCGGCAGATCGGCGCTGGTGAGCAGCCCGGGCGGCGCGGCCAC
CACCGACCTGATCGCGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MHSIEVPAEVRAALDALDAADAAIRALDFDALHPVVRLRALERMEASRRRQIAVSHGVIAGLAGEGPGNVGGPVHKVIAD
RLRISYAEACRRLREAKQLSPRLTLTGQELPPELPATAGVWREGMLDGQHLRVIEKFVRDLPETTPVRALEEAERFLAHQ
ATLLRPDQLEKVAHQCALRINPDGKFSDADRARQRGFTWCGQRADGMSFGKLWASPELRANLDAWLARFAAPGMCNPDDE
APCVAGEPDEESATKDSRTPAQRQHDALNALLRGRLGDPKLGLHNGLPVTVVVSTTLRELTTGAGRAVTGGGTLLPMRDV
IRMARHAYHYLAVFDEHSSRPLYLGRSRRVASPDQRVVLYAKDRGCTHPGCDAPGYWCEVHHLNEWATGGLTDVDNLTFA
CGPHHKLIENGWRTKKLADGRTAWIPPPQWDRGARTNDFHHPERDFDGEDP

Sequences:

>Translated_451_residues
MHSIEVPAEVRAALDALDAADAAIRALDFDALHPVVRLRALERMEASRRRQIAVSHGVIAGLAGEGPGNVGGPVHKVIAD
RLRISYAEACRRLREAKQLSPRLTLTGQELPPELPATAGVWREGMLDGQHLRVIEKFVRDLPETTPVRALEEAERFLAHQ
ATLLRPDQLEKVAHQCALRINPDGKFSDADRARQRGFTWCGQRADGMSFGKLWASPELRANLDAWLARFAAPGMCNPDDE
APCVAGEPDEESATKDSRTPAQRQHDALNALLRGRLGDPKLGLHNGLPVTVVVSTTLRELTTGAGRAVTGGGTLLPMRDV
IRMARHAYHYLAVFDEHSSRPLYLGRSRRVASPDQRVVLYAKDRGCTHPGCDAPGYWCEVHHLNEWATGGLTDVDNLTFA
CGPHHKLIENGWRTKKLADGRTAWIPPPQWDRGARTNDFHHPERDFDGEDP
>Mature_451_residues
MHSIEVPAEVRAALDALDAADAAIRALDFDALHPVVRLRALERMEASRRRQIAVSHGVIAGLAGEGPGNVGGPVHKVIAD
RLRISYAEACRRLREAKQLSPRLTLTGQELPPELPATAGVWREGMLDGQHLRVIEKFVRDLPETTPVRALEEAERFLAHQ
ATLLRPDQLEKVAHQCALRINPDGKFSDADRARQRGFTWCGQRADGMSFGKLWASPELRANLDAWLARFAAPGMCNPDDE
APCVAGEPDEESATKDSRTPAQRQHDALNALLRGRLGDPKLGLHNGLPVTVVVSTTLRELTTGAGRAVTGGGTLLPMRDV
IRMARHAYHYLAVFDEHSSRPLYLGRSRRVASPDQRVVLYAKDRGCTHPGCDAPGYWCEVHHLNEWATGGLTDVDNLTFA
CGPHHKLIENGWRTKKLADGRTAWIPPPQWDRGARTNDFHHPERDFDGEDP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Rv1128c/1148c/1588c/1702c/1945/3466 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003870
- InterPro:   IPR003615 [H]

Pfam domain/function: PF02720 DUF222 [H]

EC number: NA

Molecular weight: Translated: 49803; Mature: 49803

Theoretical pI: Translated: 7.31; Mature: 7.31

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSIEVPAEVRAALDALDAADAAIRALDFDALHPVVRLRALERMEASRRRQIAVSHGVIA
CCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
GLAGEGPGNVGGPVHKVIADRLRISYAEACRRLREAKQLSPRLTLTGQELPPELPATAGV
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHH
WREGMLDGQHLRVIEKFVRDLPETTPVRALEEAERFLAHQATLLRPDQLEKVAHQCALRI
HHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCEEEE
NPDGKFSDADRARQRGFTWCGQRADGMSFGKLWASPELRANLDAWLARFAAPGMCNPDDE
CCCCCCCCHHHHHHCCCCHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC
APCVAGEPDEESATKDSRTPAQRQHDALNALLRGRLGDPKLGLHNGLPVTVVVSTTLREL
CCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHH
TTGAGRAVTGGGTLLPMRDVIRMARHAYHYLAVFDEHSSRPLYLGRSRRVASPDQRVVLY
HCCCCCEECCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCEEECCCCCCCCCCCEEEEE
AKDRGCTHPGCDAPGYWCEVHHLNEWATGGLTDVDNLTFACGPHHKLIENGWRTKKLADG
ECCCCCCCCCCCCCCCEEEEEECCHHCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCC
RTAWIPPPQWDRGARTNDFHHPERDFDGEDP
CEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHSIEVPAEVRAALDALDAADAAIRALDFDALHPVVRLRALERMEASRRRQIAVSHGVIA
CCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
GLAGEGPGNVGGPVHKVIADRLRISYAEACRRLREAKQLSPRLTLTGQELPPELPATAGV
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHH
WREGMLDGQHLRVIEKFVRDLPETTPVRALEEAERFLAHQATLLRPDQLEKVAHQCALRI
HHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCEEEE
NPDGKFSDADRARQRGFTWCGQRADGMSFGKLWASPELRANLDAWLARFAAPGMCNPDDE
CCCCCCCCHHHHHHCCCCHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC
APCVAGEPDEESATKDSRTPAQRQHDALNALLRGRLGDPKLGLHNGLPVTVVVSTTLREL
CCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHH
TTGAGRAVTGGGTLLPMRDVIRMARHAYHYLAVFDEHSSRPLYLGRSRRVASPDQRVVLY
HCCCCCEECCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCEEECCCCCCCCCCCEEEEE
AKDRGCTHPGCDAPGYWCEVHHLNEWATGGLTDVDNLTFACGPHHKLIENGWRTKKLADG
ECCCCCCCCCCCCCCCEEEEEECCHHCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCC
RTAWIPPPQWDRGARTNDFHHPERDFDGEDP
CEECCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]