| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408908
Identifier: 41408908
GI number: 41408908
Start: 3141759
End: 3142400
Strand: Reverse
Name: 41408908
Synonym: MAP2810c
Alternate gene names: NA
Gene position: 3142400-3141759 (Counterclockwise)
Preceding gene: 41408909
Following gene: 41408905
Centisome position: 65.06
GC content: 72.43
Gene sequence:
>642_bases ATGACCGCTAACCGCATCAATCCCGAACGTCTGCTGGCACAGGCAGGCGGAGTCAGTGGTGTCATCTACTCGTCGCTGCC GGTGGTCGTGTTCGTCATCGCGTCGAGCGTGTCCGGCCTGGTCGCGGCGATCGCGGCCGCGCTGGGGGTGGCCGCGCTGG TGCTGCTGTGGCGCCTGGTGCGCCGGGACTCGCCGCAGCCCGCGATCTCGGGGTTCTTCGGTGTGGCGCTGTGCGCGCTG ATCGCCTACGTGGTGGGGGAGTCCAAGGGCTACTTCCTGCTGGGCATCTGGATGTCGTTGCTGTGGGCGGTGGTGGTCGC CGCGTCGGTGCTGATCCGCCGCCCGTTGGTCGGCTACGCGTGGAGCTGGGCCGGCGGGCGCGGCGACGGCTGGCGCAGCG TGCCGCGGGCCGTGTACGCGTTCGACGTCGCCTCGCTGTGCTGGGTGCTGGTGTTCGCCGCCCGCTTCGTGGTGCAGGGG CTGCTGTACGACGCCGACCGCACCGGCTGGCTGGCGGCGGCGCGGATCGGGATGGGCTGGCCGCTGACCGTGCTGGCCGC GCTGCCCACCTACGCCGCGATCAAGTCGGCGCAGCGGGCCATCGCCGCGGTCGAGCTGGCCTCCGGCGCCGCCGGCGAGT AA
Upstream 100 bases:
>100_bases CCAAGGCGATCTACAACCCGCACTACGAAATTCAACGGTGACCGTCCCCGACGACATGGGGGCAATCCCGTCCCCCGGGG AGCCGGGCTCATCGGAACAA
Downstream 100 bases:
>100_bases TCCGGCGGCCGCTAGCCGAGCAGCAGTTTCTGCAGTTCCTCTTCGGCCTCGGCCACGGCGACGAACAGCAGCTCGTCGCC GCCTTCCAGCGGCTCGTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; Conserved Alanine And Leucine Rich Membrane Protein
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MTANRINPERLLAQAGGVSGVIYSSLPVVVFVIASSVSGLVAAIAAALGVAALVLLWRLVRRDSPQPAISGFFGVALCAL IAYVVGESKGYFLLGIWMSLLWAVVVAASVLIRRPLVGYAWSWAGGRGDGWRSVPRAVYAFDVASLCWVLVFAARFVVQG LLYDADRTGWLAAARIGMGWPLTVLAALPTYAAIKSAQRAIAAVELASGAAGE
Sequences:
>Translated_213_residues MTANRINPERLLAQAGGVSGVIYSSLPVVVFVIASSVSGLVAAIAAALGVAALVLLWRLVRRDSPQPAISGFFGVALCAL IAYVVGESKGYFLLGIWMSLLWAVVVAASVLIRRPLVGYAWSWAGGRGDGWRSVPRAVYAFDVASLCWVLVFAARFVVQG LLYDADRTGWLAAARIGMGWPLTVLAALPTYAAIKSAQRAIAAVELASGAAGE >Mature_212_residues TANRINPERLLAQAGGVSGVIYSSLPVVVFVIASSVSGLVAAIAAALGVAALVLLWRLVRRDSPQPAISGFFGVALCALI AYVVGESKGYFLLGIWMSLLWAVVVAASVLIRRPLVGYAWSWAGGRGDGWRSVPRAVYAFDVASLCWVLVFAARFVVQGL LYDADRTGWLAAARIGMGWPLTVLAALPTYAAIKSAQRAIAAVELASGAAGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22320; Mature: 22189
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANRINPERLLAQAGGVSGVIYSSLPVVVFVIASSVSGLVAAIAAALGVAALVLLWRLV CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRDSPQPAISGFFGVALCALIAYVVGESKGYFLLGIWMSLLWAVVVAASVLIRRPLVGYA HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH WSWAGGRGDGWRSVPRAVYAFDVASLCWVLVFAARFVVQGLLYDADRTGWLAAARIGMGW CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCC PLTVLAALPTYAAIKSAQRAIAAVELASGAAGE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TANRINPERLLAQAGGVSGVIYSSLPVVVFVIASSVSGLVAAIAAALGVAALVLLWRLV CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRDSPQPAISGFFGVALCALIAYVVGESKGYFLLGIWMSLLWAVVVAASVLIRRPLVGYA HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH WSWAGGRGDGWRSVPRAVYAFDVASLCWVLVFAARFVVQGLLYDADRTGWLAAARIGMGW CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCC PLTVLAALPTYAAIKSAQRAIAAVELASGAAGE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA