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The map label for this gene is 41408904

Identifier: 41408904

GI number: 41408904

Start: 3137134

End: 3138219

Strand: Reverse

Name: 41408904

Synonym: MAP2806c

Alternate gene names: NA

Gene position: 3138219-3137134 (Counterclockwise)

Preceding gene: 41408905

Following gene: 41408901

Centisome position: 64.98

GC content: 75.97

Gene sequence:

>1086_bases
TTGACCCGCCCGGGGCCGCCCCCGGTGGGCGAGCTGACGCTGACCACCGGCAGCCCGGCCAACGGCGGCAGCTGCGTGGC
GCATCACGAGGGCCGGGTGGTGTTCGTCCGGTACGCGCTGCCCGGTGAGCGGGTCCGGGTTCGGGTCACCGCCGACCGCG
GATCCTATTGGCACGCAGAGGTTCTCGACGTCATCGAGGCGGCGGACGGCCGCATCGAGTCGCTGTGCCCGATCGCCGGG
GTGGACGGCGCCGGGTGCTGCGACCTGGCTTTCGTGCGGCCCGAGGCGGCCCGGGCGCTCAAGGCCGCGGTGGTGGCCAA
TCAGCTGGAGCGCCTCGGCGGGCATCGCTGGGCCGGCGAGGCCGAACCGCTGGGGAATACCGGGCCGACGGGGTGGCGCA
CCCGGGTCCGGCTGGACGTGGGCGCCGACCGCCGGCCGGGCTTTCACCGGTACCACAGCGAGGAATTGGTGACCGACCTG
CGCTGCGCGCAGCTGCCGCCCGGCATGCTGGACGGCATCGCCGAGACCCAGTGGCCGTCGGCCGCCCAGCTGCACGTGGC
CGTCGACGACGACGGCGCCCGCCACGTGGTGCGCACCCTGCGGCAGGGCCGGCGCACCGCGACCAAGGTCATCGAGGGAC
GCTACGAGGCGGTGCAGCGGGTGAGCGGGCGCAGCTGGCGGGTGCCGGTGACCGCGTTCTGGCAGGCGCACCGCGACGCA
GCGGCGACCTACCGCGCCCTGGTGCTCGACTGGGCGCAGCCCGGCGCCGGCATGACCGCGTGGGATCTCTACGGCGGCGC
AGGCGTTTTCGCCGCGGCGCTGGGCGAGGCCGTGTGCGCGTCCGGGCGGGTGCTCAGCGTCGACACCTCGCGGGCGTCCA
CCCGGGCCGCCCGGGCGGCGCTGGCCGACCTGCCGCAGGTGCAGGTGGTCACCGACTCGGTGCGCCGCGCCCTGGCGGCG
CAACGAACCCCCGCCTTGCAAGCAGACGTGGCGGTGCTGGATCCGCCGCGGGCCGGCGCCGGGCGCGAGGTCATCGACTC
GCTGGCCGCCGCCGGCCCCGCATCGTCCACATCGGTTGTGAGGTAG

Upstream 100 bases:

>100_bases
TGATGGTGACTTCGGTTCCCTGGCAACTGAGTTCGTCGGAGCGGCGCAAGACCCTGGAGCCGCACATGGCCCCGGGCGAC
GCCCGGCGGGGAATCTTCGA

Downstream 100 bases:

>100_bases
CATCTTTCGCCCGCGACATGGGAATCTACCTGGGGCACGGCTACACCATCGAGAAGATCAGGGTGTTCGACGCGTTCCCG
CTCACCCATCACAGCGAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MTRPGPPPVGELTLTTGSPANGGSCVAHHEGRVVFVRYALPGERVRVRVTADRGSYWHAEVLDVIEAADGRIESLCPIAG
VDGAGCCDLAFVRPEAARALKAAVVANQLERLGGHRWAGEAEPLGNTGPTGWRTRVRLDVGADRRPGFHRYHSEELVTDL
RCAQLPPGMLDGIAETQWPSAAQLHVAVDDDGARHVVRTLRQGRRTATKVIEGRYEAVQRVSGRSWRVPVTAFWQAHRDA
AATYRALVLDWAQPGAGMTAWDLYGGAGVFAAALGEAVCASGRVLSVDTSRASTRAARAALADLPQVQVVTDSVRRALAA
QRTPALQADVAVLDPPRAGAGREVIDSLAAAGPASSTSVVR

Sequences:

>Translated_361_residues
MTRPGPPPVGELTLTTGSPANGGSCVAHHEGRVVFVRYALPGERVRVRVTADRGSYWHAEVLDVIEAADGRIESLCPIAG
VDGAGCCDLAFVRPEAARALKAAVVANQLERLGGHRWAGEAEPLGNTGPTGWRTRVRLDVGADRRPGFHRYHSEELVTDL
RCAQLPPGMLDGIAETQWPSAAQLHVAVDDDGARHVVRTLRQGRRTATKVIEGRYEAVQRVSGRSWRVPVTAFWQAHRDA
AATYRALVLDWAQPGAGMTAWDLYGGAGVFAAALGEAVCASGRVLSVDTSRASTRAARAALADLPQVQVVTDSVRRALAA
QRTPALQADVAVLDPPRAGAGREVIDSLAAAGPASSTSVVR
>Mature_360_residues
TRPGPPPVGELTLTTGSPANGGSCVAHHEGRVVFVRYALPGERVRVRVTADRGSYWHAEVLDVIEAADGRIESLCPIAGV
DGAGCCDLAFVRPEAARALKAAVVANQLERLGGHRWAGEAEPLGNTGPTGWRTRVRLDVGADRRPGFHRYHSEELVTDLR
CAQLPPGMLDGIAETQWPSAAQLHVAVDDDGARHVVRTLRQGRRTATKVIEGRYEAVQRVSGRSWRVPVTAFWQAHRDAA
ATYRALVLDWAQPGAGMTAWDLYGGAGVFAAALGEAVCASGRVLSVDTSRASTRAARAALADLPQVQVVTDSVRRALAAQ
RTPALQADVAVLDPPRAGAGREVIDSLAAAGPASSTSVVR

Specific function: Unknown

COG id: COG2265

COG function: function code J; SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016027
- InterPro:   IPR002792
- InterPro:   IPR010280 [H]

Pfam domain/function: PF01938 TRAM; PF05958 tRNA_U5-meth_tr [H]

EC number: NA

Molecular weight: Translated: 38240; Mature: 38108

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRPGPPPVGELTLTTGSPANGGSCVAHHEGRVVFVRYALPGERVRVRVTADRGSYWHAE
CCCCCCCCCCEEEEECCCCCCCCCEEEECCCCEEEEEEECCCCEEEEEEEECCCCCHHHH
VLDVIEAADGRIESLCPIAGVDGAGCCDLAFVRPEAARALKAAVVANQLERLGGHRWAGE
HHHHHHHCCCCHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCC
AEPLGNTGPTGWRTRVRLDVGADRRPGFHRYHSEELVTDLRCAQLPPGMLDGIAETQWPS
CCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCHHCCCCC
AAQLHVAVDDDGARHVVRTLRQGRRTATKVIEGRYEAVQRVSGRSWRVPVTAFWQAHRDA
CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
AATYRALVLDWAQPGAGMTAWDLYGGAGVFAAALGEAVCASGRVLSVDTSRASTRAARAA
HHHHHHHEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
LADLPQVQVVTDSVRRALAAQRTPALQADVAVLDPPRAGAGREVIDSLAAAGPASSTSVV
HHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCC
R
C
>Mature Secondary Structure 
TRPGPPPVGELTLTTGSPANGGSCVAHHEGRVVFVRYALPGERVRVRVTADRGSYWHAE
CCCCCCCCCEEEEECCCCCCCCCEEEECCCCEEEEEEECCCCEEEEEEEECCCCCHHHH
VLDVIEAADGRIESLCPIAGVDGAGCCDLAFVRPEAARALKAAVVANQLERLGGHRWAGE
HHHHHHHCCCCHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCC
AEPLGNTGPTGWRTRVRLDVGADRRPGFHRYHSEELVTDLRCAQLPPGMLDGIAETQWPS
CCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCHHCCCCC
AAQLHVAVDDDGARHVVRTLRQGRRTATKVIEGRYEAVQRVSGRSWRVPVTAFWQAHRDA
CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
AATYRALVLDWAQPGAGMTAWDLYGGAGVFAAALGEAVCASGRVLSVDTSRASTRAARAA
HHHHHHHEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
LADLPQVQVVTDSVRRALAAQRTPALQADVAVLDPPRAGAGREVIDSLAAAGPASSTSVV
HHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]