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The map label for this gene is msrB [H]

Identifier: 41408892

GI number: 41408892

Start: 3124909

End: 3125313

Strand: Direct

Name: msrB [H]

Synonym: MAP2794

Alternate gene names: 41408892

Gene position: 3124909-3125313 (Clockwise)

Preceding gene: 41408891

Following gene: 41408893

Centisome position: 64.7

GC content: 66.42

Gene sequence:

>405_bases
ATGACCAGTCCGAAGGTGCAATTGACCGACGACGAGTGGCGCCAGCGGCTCACCCCGGAGGAGTTCCACGTGCTGCGCCA
GGCCGGCACCGAGCGACCCTTCACCGGTGAATACACCGACACCAAGACCGAGGGCGTCTACCAGTGCCGGGCCTGCGGGG
CCGAATTGTTCCGCAGCACAGAGAAATTCGAGTCGCACTGCGGCTGGCCGTCGTTCTACGACCCGGCGAACTCCGATGCG
GTGATCCTGCGGCCGGACCACTCTTTGGGCACGACGCGCACCGAGGTGCTGTGCGCGAACTGCCACAGCCACCTGGGCCA
CGTGTTCACCGGCGAGGGCTACCCGACGCCGACCGATCAGCGCTACTGCATCAACTCGATCTGCCTGCGGCTGGCGCCGT
CCTGA

Upstream 100 bases:

>100_bases
GCGCAGCCGGGCGCAGCGGGTCACCGCCATTAGCGCTAGCGTGGAGGCATGACGCGCCGGCGACGATGCAGAGCGCAGCG
ATGAGGAGGAGCGTCGCAAT

Downstream 100 bases:

>100_bases
TTTGCGAGGCGCCTGTTGCCCTTGCCCTCGCGCGCTGCGACGACACTTAAACCACGCACGCGACACGCCGGAAACGGGCG
CCCTGGTTTAAGTTTCGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MTSPKVQLTDDEWRQRLTPEEFHVLRQAGTERPFTGEYTDTKTEGVYQCRACGAELFRSTEKFESHCGWPSFYDPANSDA
VILRPDHSLGTTRTEVLCANCHSHLGHVFTGEGYPTPTDQRYCINSICLRLAPS

Sequences:

>Translated_134_residues
MTSPKVQLTDDEWRQRLTPEEFHVLRQAGTERPFTGEYTDTKTEGVYQCRACGAELFRSTEKFESHCGWPSFYDPANSDA
VILRPDHSLGTTRTEVLCANCHSHLGHVFTGEGYPTPTDQRYCINSICLRLAPS
>Mature_133_residues
TSPKVQLTDDEWRQRLTPEEFHVLRQAGTERPFTGEYTDTKTEGVYQCRACGAELFRSTEKFESHCGWPSFYDPANSDAV
ILRPDHSLGTTRTEVLCANCHSHLGHVFTGEGYPTPTDQRYCINSICLRLAPS

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=130, Percent_Identity=47.6923076923077, Blast_Score=131, Evalue=1e-31,
Organism=Homo sapiens, GI301336162, Length=130, Percent_Identity=47.6923076923077, Blast_Score=131, Evalue=1e-31,
Organism=Homo sapiens, GI73089054, Length=130, Percent_Identity=47.6923076923077, Blast_Score=131, Evalue=1e-31,
Organism=Homo sapiens, GI37620216, Length=130, Percent_Identity=47.6923076923077, Blast_Score=131, Evalue=2e-31,
Organism=Homo sapiens, GI117606353, Length=136, Percent_Identity=44.8529411764706, Blast_Score=122, Evalue=7e-29,
Organism=Homo sapiens, GI7706511, Length=101, Percent_Identity=37.6237623762376, Blast_Score=66, Evalue=8e-12,
Organism=Escherichia coli, GI1788077, Length=121, Percent_Identity=45.4545454545455, Blast_Score=116, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI17553450, Length=119, Percent_Identity=47.8991596638655, Blast_Score=112, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI115532676, Length=119, Percent_Identity=47.8991596638655, Blast_Score=112, Evalue=5e-26,
Organism=Saccharomyces cerevisiae, GI6319816, Length=127, Percent_Identity=44.8818897637795, Blast_Score=119, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24645799, Length=130, Percent_Identity=48.4615384615385, Blast_Score=124, Evalue=2e-29,
Organism=Drosophila melanogaster, GI45553335, Length=131, Percent_Identity=48.0916030534351, Blast_Score=124, Evalue=3e-29,
Organism=Drosophila melanogaster, GI21356369, Length=131, Percent_Identity=48.0916030534351, Blast_Score=124, Evalue=3e-29,
Organism=Drosophila melanogaster, GI221378664, Length=133, Percent_Identity=45.8646616541353, Blast_Score=121, Evalue=1e-28,
Organism=Drosophila melanogaster, GI221378662, Length=140, Percent_Identity=44.2857142857143, Blast_Score=120, Evalue=4e-28,
Organism=Drosophila melanogaster, GI24645801, Length=142, Percent_Identity=44.3661971830986, Blast_Score=119, Evalue=5e-28,
Organism=Drosophila melanogaster, GI24645804, Length=142, Percent_Identity=44.3661971830986, Blast_Score=119, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 15172; Mature: 15041

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPKVQLTDDEWRQRLTPEEFHVLRQAGTERPFTGEYTDTKTEGVYQCRACGAELFRST
CCCCCEEECCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
EKFESHCGWPSFYDPANSDAVILRPDHSLGTTRTEVLCANCHSHLGHVFTGEGYPTPTDQ
HHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCC
RYCINSICLRLAPS
HHHHHHHHHHCCCC
>Mature Secondary Structure 
TSPKVQLTDDEWRQRLTPEEFHVLRQAGTERPFTGEYTDTKTEGVYQCRACGAELFRST
CCCCEEECCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
EKFESHCGWPSFYDPANSDAVILRPDHSLGTTRTEVLCANCHSHLGHVFTGEGYPTPTDQ
HHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCC
RYCINSICLRLAPS
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA