| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408822
Identifier: 41408822
GI number: 41408822
Start: 3059775
End: 3060200
Strand: Reverse
Name: 41408822
Synonym: MAP2724c
Alternate gene names: NA
Gene position: 3060200-3059775 (Counterclockwise)
Preceding gene: 41408823
Following gene: 41408821
Centisome position: 63.36
GC content: 72.54
Gene sequence:
>426_bases ATGAGCACCGGAACCGCGATCGCCGTCGCGCTCACCTTCGTCTGGCTCGGCATGGTGCTGGCCATCTCGTTCCTGGAGGC GCCGCTGAAGTTCCGGGCGCCCAACGTGACCCTGCAGATCGGGCTGGGCATCGGGCGCTTGGTCTTTCGCGCGCTCAACA CCGTCGAGGTGGTCTTCGCCCTCGTCATCGGCGCGATCGTGGTGGCCGGCCCCACCCGGGCGGGCGTCGCGGTGGCCATC GGCGTGGCCGTCGCCGCCCTGGCCGTCCAGCTGGTCGCCGTCCGGCCCGCCCTGACCCGCCGGTCCGACCGGGTGCTGGC CGGGGACGACGGACCCCGCTCCCGGGCCCACTACGGCTACGTCGCGCTGGAGGCGGTCAAGGTGGTCGCGCTGATCGCGG CGGGGATACTGCTACTGAGCGGTTGA
Upstream 100 bases:
>100_bases CCATGGAAACCTGGGGCGCGCCGGTCTCGGTGGACCGGCTCGACCCGTTCGTCGAGCCGGACCTGTGTCTGGCTCACCTG ACGCTGCAAGGGGCGGGCAG
Downstream 100 bases:
>100_bases CGGCCAACCCTCAAGGCGAAGGCCTTGCGACTTCGAAGGACCCGATTATGGATTCCGTCTCGTTGACCGACCTTGCGGCC GAAAAGCTCGCCGAGGCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSTGTAIAVALTFVWLGMVLAISFLEAPLKFRAPNVTLQIGLGIGRLVFRALNTVEVVFALVIGAIVVAGPTRAGVAVAI GVAVAALAVQLVAVRPALTRRSDRVLAGDDGPRSRAHYGYVALEAVKVVALIAAGILLLSG
Sequences:
>Translated_141_residues MSTGTAIAVALTFVWLGMVLAISFLEAPLKFRAPNVTLQIGLGIGRLVFRALNTVEVVFALVIGAIVVAGPTRAGVAVAI GVAVAALAVQLVAVRPALTRRSDRVLAGDDGPRSRAHYGYVALEAVKVVALIAAGILLLSG >Mature_140_residues STGTAIAVALTFVWLGMVLAISFLEAPLKFRAPNVTLQIGLGIGRLVFRALNTVEVVFALVIGAIVVAGPTRAGVAVAIG VAVAALAVQLVAVRPALTRRSDRVLAGDDGPRSRAHYGYVALEAVKVVALIAAGILLLSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14426; Mature: 14294
Theoretical pI: Translated: 11.67; Mature: 11.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTGTAIAVALTFVWLGMVLAISFLEAPLKFRAPNVTLQIGLGIGRLVFRALNTVEVVFA CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHH LVIGAIVVAGPTRAGVAVAIGVAVAALAVQLVAVRPALTRRSDRVLAGDDGPRSRAHYGY HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHH VALEAVKVVALIAAGILLLSG HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure STGTAIAVALTFVWLGMVLAISFLEAPLKFRAPNVTLQIGLGIGRLVFRALNTVEVVFA CCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHH LVIGAIVVAGPTRAGVAVAIGVAVAALAVQLVAVRPALTRRSDRVLAGDDGPRSRAHYGY HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHH VALEAVKVVALIAAGILLLSG HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA