| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408800
Identifier: 41408800
GI number: 41408800
Start: 3038509
End: 3039879
Strand: Reverse
Name: 41408800
Synonym: MAP2702c
Alternate gene names: NA
Gene position: 3039879-3038509 (Counterclockwise)
Preceding gene: 41408801
Following gene: 41408799
Centisome position: 62.94
GC content: 74.03
Gene sequence:
>1371_bases ATGGCTGCGCTGTCGGCGGTGGTGTTCACGCTGAGCGCCTGGCTGGGCCTGTATCTGGCCGCCCGCGATCCGCGCAAACC CGTGCTGGTGCTGGCGGCGATCGGGCTGTGCGGGTTCGCGCTCGTGGTGGGGCTGGACGCGGTCCGCACCGCCAGTCCCG CGCACGCCCCGCTGCTGAGCCGCGTCGAGATCTACCTGACGGCGGTGCCCGGTGTGGCCTGGTTCGCGGTGCTCGTGGAG CTGTCCCGGCCCCCCGACGGCTGGCGCAGCCGCACCCGCGAGGTGCTGCTGGTGGCCGGGGTGGCGGCGCTGACGCTGCT CGGCGCGGCGCTGGCCGGCAGCGTGGACGGGCCGCTGCGGCCCGGCCACTGGCTGATGATGGCGGCGATCTCGGTGTCGA CCCTGGGCGCGATGGCCGTCGCGTTGCGCCGGCCGCGGCGGCCCCGGCCGGCCGTCGGGCTGGCTGTCACCGCCACCTTG TTCTTTGCGCTGGCCAACGCGATCCTGATCATTCCGCTGGGCCTGGTGCCCAGCTGGCTTGCGCTGGCCTCGACGAGCTG CGACGTGCTGGGGCTCGGCGTCGCCGTCGCGCTGTGGGACGCGTTCGACGAGGGGCACGCGCTGCGCGCCGACATGCTGC GCTCGTTCGCCGGTTCGGTGGCGGTCGCCGTGCTGTTCGGCGGCCAGGCGCTGATCGGGCTGGCGGTGACCCGCGCCGAT CCCGGCGCGCGGACCGCGCTGACCGTGCTGCTGTTCACCAGCCTGGCGATCGCGATCACCGTGCAGGTGCTCGCGGATCC GCTGGCCGGGCTGCTCGACCGGCTGGCGTTCTCGAAATCGCCTGCGCTGCGGGCGGATCGGGCCGCGCTGCGGCACACCG GCGCGGCGCTGCCGCTGCGCCAGGAGCATCCGCTGGACGGCGTCGACGACGTCACCTTCGCCAGGCTCACCCGTCGGGCA CTCGGGCACTACGGGGATCTGACCAAGCTGGTCGCCAGCCCGCTGACCGCGTTGCCGGTGATCGACGAGCGGCTGGCCGC CCGCGGGGCCCCCGACCAGCCGATCGAGCGAGCCACCGAGCTCAAGGCCGTGCTGGCCGACGCCATCGCCCGGCTCAAGC CGCGCGACGGCGGCGACTTCGGGACCACCGAGGAGTGGCGCCACTACAACTCGCTGTATTTCCCCTACGTCGTCGGGGTG CGCGCCTACGCCCAGAACGCCACCGCGTCGGGCCTGGATCCGACGGCTCGGCAGGCCTGGCAGTGGTTCGTCACCGAGGT TCCCCAGCGCTCGTTGCACAACTGGCAGAACGCCGCCGCCCGGCTGATCGCCGCCGACCTTCGCGGGCGGGTCCCGGTTC CCAGCGAGTAG
Upstream 100 bases:
>100_bases GGCGCTGCGCGACTACAGCCAGCGGCACCGCCGCTACGGCAAATAACCCGCCGCCCGGAAGGCCTTAAGCACCCGTCGAC CTGCGTGCCACACTTGGTGC
Downstream 100 bases:
>100_bases AACGGGTACTGCAGTCACCGCGGTCGCCGGACGGCACAGCGCTGTGCCCCGCGCCCGTGACCAGGCCACTAGCCGACACG GACTGGCGCGTGTCAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MAALSAVVFTLSAWLGLYLAARDPRKPVLVLAAIGLCGFALVVGLDAVRTASPAHAPLLSRVEIYLTAVPGVAWFAVLVE LSRPPDGWRSRTREVLLVAGVAALTLLGAALAGSVDGPLRPGHWLMMAAISVSTLGAMAVALRRPRRPRPAVGLAVTATL FFALANAILIIPLGLVPSWLALASTSCDVLGLGVAVALWDAFDEGHALRADMLRSFAGSVAVAVLFGGQALIGLAVTRAD PGARTALTVLLFTSLAIAITVQVLADPLAGLLDRLAFSKSPALRADRAALRHTGAALPLRQEHPLDGVDDVTFARLTRRA LGHYGDLTKLVASPLTALPVIDERLAARGAPDQPIERATELKAVLADAIARLKPRDGGDFGTTEEWRHYNSLYFPYVVGV RAYAQNATASGLDPTARQAWQWFVTEVPQRSLHNWQNAAARLIAADLRGRVPVPSE
Sequences:
>Translated_456_residues MAALSAVVFTLSAWLGLYLAARDPRKPVLVLAAIGLCGFALVVGLDAVRTASPAHAPLLSRVEIYLTAVPGVAWFAVLVE LSRPPDGWRSRTREVLLVAGVAALTLLGAALAGSVDGPLRPGHWLMMAAISVSTLGAMAVALRRPRRPRPAVGLAVTATL FFALANAILIIPLGLVPSWLALASTSCDVLGLGVAVALWDAFDEGHALRADMLRSFAGSVAVAVLFGGQALIGLAVTRAD PGARTALTVLLFTSLAIAITVQVLADPLAGLLDRLAFSKSPALRADRAALRHTGAALPLRQEHPLDGVDDVTFARLTRRA LGHYGDLTKLVASPLTALPVIDERLAARGAPDQPIERATELKAVLADAIARLKPRDGGDFGTTEEWRHYNSLYFPYVVGV RAYAQNATASGLDPTARQAWQWFVTEVPQRSLHNWQNAAARLIAADLRGRVPVPSE >Mature_455_residues AALSAVVFTLSAWLGLYLAARDPRKPVLVLAAIGLCGFALVVGLDAVRTASPAHAPLLSRVEIYLTAVPGVAWFAVLVEL SRPPDGWRSRTREVLLVAGVAALTLLGAALAGSVDGPLRPGHWLMMAAISVSTLGAMAVALRRPRRPRPAVGLAVTATLF FALANAILIIPLGLVPSWLALASTSCDVLGLGVAVALWDAFDEGHALRADMLRSFAGSVAVAVLFGGQALIGLAVTRADP GARTALTVLLFTSLAIAITVQVLADPLAGLLDRLAFSKSPALRADRAALRHTGAALPLRQEHPLDGVDDVTFARLTRRAL GHYGDLTKLVASPLTALPVIDERLAARGAPDQPIERATELKAVLADAIARLKPRDGGDFGTTEEWRHYNSLYFPYVVGVR AYAQNATASGLDPTARQAWQWFVTEVPQRSLHNWQNAAARLIAADLRGRVPVPSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48222; Mature: 48090
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALSAVVFTLSAWLGLYLAARDPRKPVLVLAAIGLCGFALVVGLDAVRTASPAHAPLLS CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH RVEIYLTAVPGVAWFAVLVELSRPPDGWRSRTREVLLVAGVAALTLLGAALAGSVDGPLR HHHHEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PGHWLMMAAISVSTLGAMAVALRRPRRPRPAVGLAVTATLFFALANAILIIPLGLVPSWL CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALASTSCDVLGLGVAVALWDAFDEGHALRADMLRSFAGSVAVAVLFGGQALIGLAVTRAD HHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEECCC PGARTALTVLLFTSLAIAITVQVLADPLAGLLDRLAFSKSPALRADRAALRHTGAALPLR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCC QEHPLDGVDDVTFARLTRRALGHYGDLTKLVASPLTALPVIDERLAARGAPDQPIERATE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHH LKAVLADAIARLKPRDGGDFGTTEEWRHYNSLYFPYVVGVRAYAQNATASGLDPTARQAW HHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH QWFVTEVPQRSLHNWQNAAARLIAADLRGRVPVPSE HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AALSAVVFTLSAWLGLYLAARDPRKPVLVLAAIGLCGFALVVGLDAVRTASPAHAPLLS HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH RVEIYLTAVPGVAWFAVLVELSRPPDGWRSRTREVLLVAGVAALTLLGAALAGSVDGPLR HHHHEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PGHWLMMAAISVSTLGAMAVALRRPRRPRPAVGLAVTATLFFALANAILIIPLGLVPSWL CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALASTSCDVLGLGVAVALWDAFDEGHALRADMLRSFAGSVAVAVLFGGQALIGLAVTRAD HHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEECCC PGARTALTVLLFTSLAIAITVQVLADPLAGLLDRLAFSKSPALRADRAALRHTGAALPLR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCC QEHPLDGVDDVTFARLTRRALGHYGDLTKLVASPLTALPVIDERLAARGAPDQPIERATE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHH LKAVLADAIARLKPRDGGDFGTTEEWRHYNSLYFPYVVGVRAYAQNATASGLDPTARQAW HHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH QWFVTEVPQRSLHNWQNAAARLIAADLRGRVPVPSE HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA