| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41408742
Identifier: 41408742
GI number: 41408742
Start: 2977494
End: 2978510
Strand: Direct
Name: 41408742
Synonym: MAP2644
Alternate gene names: NA
Gene position: 2977494-2978510 (Clockwise)
Preceding gene: 41408741
Following gene: 41408753
Centisome position: 61.65
GC content: 75.22
Gene sequence:
>1017_bases CTGATGGCCTACGACGCGGACCTGTTGGTCGTCGGCGGCGGTCCGGGCGGGTTGGCCACGGCGTTACACGCTCGCCGCCT TGGGCTTTCGGTGATCGTGGCCGAGCCGCGCGAGGCGCCCATCGACAAGGCGTGCGGCGAGGGCCTGATGCCGGGCGGGC TGGCCGCGCTGACCGCGCTGGGTGTGGACCCGGCCGGCATGCCGTTCCAGGGCATCGCCTACCTGAGCGAGCACCGGCGG GCCCAGGCCCGGTTTCGTGACGGGCCCGGCCGCGGAGTGCGTCGCACCACGTTGCACGCCGCACTGGCCGCGCGCGCCAA AGAGCAAGACACCGAATGGATCCGGGCGCGGGTGAGCAGCGTCGCGCAGGATGCGCACGGCGTGTCGGCCGCCGGTGTGC GCGCGAGGTGGTTGGTGGCGGCCGACGGGCTGCACTCGACCGTGCGGCGCGCCGTCGGCATCGCGGCGACGGCCGGGACG CCGCGGCGCTACGGCGTGCGCTGGCACTACCGGGTGCCGGCGTGGTCGGAATTCGTCGAGGTGCACTGGTCGCGCTGGGG TGAGGCGTATGTGACGCCGGTCGAACCGGACCTGGTCGGCGTGGCGATACTCTCGCGCGGACGTCCCGACCTGGGCTGGT TCCCGGGGCTGGCCGCGCGCCTGCGCGCCGCCGAGCGTGGCCGGCCGCGCGGCTGCGGCCCGTTGCGGCAGGTGGTTTCC CGCCGCGTCGCCGGGCGCGTCCTGCTGGTCGGCGACGCGGCCGGCTATGAGGATGCGCTGACCGGCGAGGGCATCAGTCT GGCGGTCAAGCAGGCCGCCGCGGCGGTCCGGGCCATCGTCGACGAGAGGCCGGCGTCATATGAAGCCGCGTGGCACCGGA TCACCCGCGACTATCGGCTACTCACCCGCGCGCTGGTGCTGGCCAGCACACCGCGGGCGGTGCGCCGCGCCATCGTGCCG GCCGGCGCGCTGTTGCCCGGCGCGTTCCGCGCCGGGGTGAACATCCTGGCCCGCTAG
Upstream 100 bases:
>100_bases GCGCTGCTGAGAGTGCGTCTGCGGGTGGAGAATTCGGCCTTGGGCTACACGTGAACGACCGCGCCGGCGACGATGCGAAG CGATGCGAGGAGGAGCGGCG
Downstream 100 bases:
>100_bases GGCGTGGGTTCAGCGCGCCTGCCAGACCGGCTCCCGCTTCTCGGCGAACGCCCGCGGGCCCTCCTTGGCGTCCTCCGATT TGAGCAGGGCCCGCATCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Monooxygenase; Pyridine Nucleotide-Disulphide Oxidoreductase; Flavin-Dependent Dehydrogenase
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MMAYDADLLVVGGGPGGLATALHARRLGLSVIVAEPREAPIDKACGEGLMPGGLAALTALGVDPAGMPFQGIAYLSEHRR AQARFRDGPGRGVRRTTLHAALAARAKEQDTEWIRARVSSVAQDAHGVSAAGVRARWLVAADGLHSTVRRAVGIAATAGT PRRYGVRWHYRVPAWSEFVEVHWSRWGEAYVTPVEPDLVGVAILSRGRPDLGWFPGLAARLRAAERGRPRGCGPLRQVVS RRVAGRVLLVGDAAGYEDALTGEGISLAVKQAAAAVRAIVDERPASYEAAWHRITRDYRLLTRALVLASTPRAVRRAIVP AGALLPGAFRAGVNILAR
Sequences:
>Translated_338_residues MMAYDADLLVVGGGPGGLATALHARRLGLSVIVAEPREAPIDKACGEGLMPGGLAALTALGVDPAGMPFQGIAYLSEHRR AQARFRDGPGRGVRRTTLHAALAARAKEQDTEWIRARVSSVAQDAHGVSAAGVRARWLVAADGLHSTVRRAVGIAATAGT PRRYGVRWHYRVPAWSEFVEVHWSRWGEAYVTPVEPDLVGVAILSRGRPDLGWFPGLAARLRAAERGRPRGCGPLRQVVS RRVAGRVLLVGDAAGYEDALTGEGISLAVKQAAAAVRAIVDERPASYEAAWHRITRDYRLLTRALVLASTPRAVRRAIVP AGALLPGAFRAGVNILAR >Mature_338_residues MMAYDADLLVVGGGPGGLATALHARRLGLSVIVAEPREAPIDKACGEGLMPGGLAALTALGVDPAGMPFQGIAYLSEHRR AQARFRDGPGRGVRRTTLHAALAARAKEQDTEWIRARVSSVAQDAHGVSAAGVRARWLVAADGLHSTVRRAVGIAATAGT PRRYGVRWHYRVPAWSEFVEVHWSRWGEAYVTPVEPDLVGVAILSRGRPDLGWFPGLAARLRAAERGRPRGCGPLRQVVS RRVAGRVLLVGDAAGYEDALTGEGISLAVKQAAAAVRAIVDERPASYEAAWHRITRDYRLLTRALVLASTPRAVRRAIVP AGALLPGAFRAGVNILAR
Specific function: Unknown
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35998; Mature: 35998
Theoretical pI: Translated: 11.58; Mature: 11.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAYDADLLVVGGGPGGLATALHARRLGLSVIVAEPREAPIDKACGEGLMPGGLAALTAL CCEECCCEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHCCCCCCCHHHHHHHH GVDPAGMPFQGIAYLSEHRRAQARFRDGPGRGVRRTTLHAALAARAKEQDTEWIRARVSS CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VAQDAHGVSAAGVRARWLVAADGLHSTVRRAVGIAATAGTPRRYGVRWHYRVPAWSEFVE HHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHEECCCCCCCCCEEEEEECCCHHHHHH VHWSRWGEAYVTPVEPDLVGVAILSRGRPDLGWFPGLAARLRAAERGRPRGCGPLRQVVS HHHHHCCCEEECCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHH RRVAGRVLLVGDAAGYEDALTGEGISLAVKQAAAAVRAIVDERPASYEAAWHRITRDYRL HHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LTRALVLASTPRAVRRAIVPAGALLPGAFRAGVNILAR HHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MMAYDADLLVVGGGPGGLATALHARRLGLSVIVAEPREAPIDKACGEGLMPGGLAALTAL CCEECCCEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHCCCCCCCHHHHHHHH GVDPAGMPFQGIAYLSEHRRAQARFRDGPGRGVRRTTLHAALAARAKEQDTEWIRARVSS CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VAQDAHGVSAAGVRARWLVAADGLHSTVRRAVGIAATAGTPRRYGVRWHYRVPAWSEFVE HHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHEECCCCCCCCCEEEEEECCCHHHHHH VHWSRWGEAYVTPVEPDLVGVAILSRGRPDLGWFPGLAARLRAAERGRPRGCGPLRQVVS HHHHHCCCEEECCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHH RRVAGRVLLVGDAAGYEDALTGEGISLAVKQAAAAVRAIVDERPASYEAAWHRITRDYRL HHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LTRALVLASTPRAVRRAIVPAGALLPGAFRAGVNILAR HHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA