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The map label for this gene is 41408738

Identifier: 41408738

GI number: 41408738

Start: 2973724

End: 2974446

Strand: Reverse

Name: 41408738

Synonym: MAP2640c

Alternate gene names: NA

Gene position: 2974446-2973724 (Counterclockwise)

Preceding gene: 41408739

Following gene: 41408736

Centisome position: 61.59

GC content: 70.26

Gene sequence:

>723_bases
ATGAGCCAGTCAACGAGCCCGTACCACACCAGCGTCTTCGCCGAGCTGCGCCGCGCCATCACCAATGTTGCTGTGCCCCA
CAATGAACCGCCGACCATCGTCCGGCGCCGACGCGTCGTCGTCGCGATCACCCTGGTGCTCGGGGCCGCGGTGCTGGGCT
ACTCGTTGCGCCGCCATCCGGGCGAGTCCAGCTTCTACTGGCTGACGCTGGGCCTGGCGGCGGTGTGGACCGTCGGGGCG
CTGAGCTCCGGCCCGCTGCACCTGGGCGGCATCTGCTGGCGGGGCCGCAACCAACGCCCCGTCATCACCGGGACGACGGT
CGGGCTGTTGCTCGGCGGCGCGTTCGTGGTGGGCGGGCTGATCGCCCGGGAAATCCCGGCCGTGTCCGCGTTGATCACCC
GGGTGCTGCTGTTCGCCCACCACGGGTGGTTACCGCTGGTGGTGGCGATCACGGTGATCAACGGCATCGCCGAGGAACTG
TTCTTCCGCGGCGCGCTGTACACCGCGCTGGGCCGGTATCACCCGGTGCTGATCTCGACCCTGCTGTACACGGCCGCGAC
CATGGCCGCCGGCAACCCGATGCTCGGATTCGCCGCGGTCATCCTCGGTACGGTGTGTGCGCTGGAACGCCGGGCCAGCG
GGGGCGTGCTGGCCCCGGTTCTGACGCACTGCGGGTGGGGCCTGATCATGGTGCTGGCCCTGCCGCCCGTGTTCGGGCTC
TGA

Upstream 100 bases:

>100_bases
CGACCCTGGGGCTGGTGAACAAGGTCCCCGGTCCGGTGGCCGGAGCGGTTCGCACCGGCCTCGACATCCTGATCGCTCTG
ACCCCGAAGGTGCGTCCCGC

Downstream 100 bases:

>100_bases
CCAATCCGTTGCGCCGTTGCGGCGCAACGGGATTCAGCGATCGGTGAAGTTGGGGGTGCGCCGCTGCTGGAAGGCGGTGG
CGCCCTCGACGAAGTCGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein; Caax Amino Protease Family Protein; CAAX Amino Terminal Protease Family Protein

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MSQSTSPYHTSVFAELRRAITNVAVPHNEPPTIVRRRRVVVAITLVLGAAVLGYSLRRHPGESSFYWLTLGLAAVWTVGA
LSSGPLHLGGICWRGRNQRPVITGTTVGLLLGGAFVVGGLIAREIPAVSALITRVLLFAHHGWLPLVVAITVINGIAEEL
FFRGALYTALGRYHPVLISTLLYTAATMAAGNPMLGFAAVILGTVCALERRASGGVLAPVLTHCGWGLIMVLALPPVFGL

Sequences:

>Translated_240_residues
MSQSTSPYHTSVFAELRRAITNVAVPHNEPPTIVRRRRVVVAITLVLGAAVLGYSLRRHPGESSFYWLTLGLAAVWTVGA
LSSGPLHLGGICWRGRNQRPVITGTTVGLLLGGAFVVGGLIAREIPAVSALITRVLLFAHHGWLPLVVAITVINGIAEEL
FFRGALYTALGRYHPVLISTLLYTAATMAAGNPMLGFAAVILGTVCALERRASGGVLAPVLTHCGWGLIMVLALPPVFGL
>Mature_239_residues
SQSTSPYHTSVFAELRRAITNVAVPHNEPPTIVRRRRVVVAITLVLGAAVLGYSLRRHPGESSFYWLTLGLAAVWTVGAL
SSGPLHLGGICWRGRNQRPVITGTTVGLLLGGAFVVGGLIAREIPAVSALITRVLLFAHHGWLPLVVAITVINGIAEELF
FRGALYTALGRYHPVLISTLLYTAATMAAGNPMLGFAAVILGTVCALERRASGGVLAPVLTHCGWGLIMVLALPPVFGL

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25400; Mature: 25268

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSTSPYHTSVFAELRRAITNVAVPHNEPPTIVRRRRVVVAITLVLGAAVLGYSLRRHP
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GESSFYWLTLGLAAVWTVGALSSGPLHLGGICWRGRNQRPVITGTTVGLLLGGAFVVGGL
CCCCEEHHHHHHHHHHHHHCCCCCCEEECCEEECCCCCCCEEEHHHHHHHHHHHHHHHHH
IAREIPAVSALITRVLLFAHHGWLPLVVAITVINGIAEELFFRGALYTALGRYHPVLIST
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLYTAATMAAGNPMLGFAAVILGTVCALERRASGGVLAPVLTHCGWGLIMVLALPPVFGL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHCHHCCC
>Mature Secondary Structure 
SQSTSPYHTSVFAELRRAITNVAVPHNEPPTIVRRRRVVVAITLVLGAAVLGYSLRRHP
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GESSFYWLTLGLAAVWTVGALSSGPLHLGGICWRGRNQRPVITGTTVGLLLGGAFVVGGL
CCCCEEHHHHHHHHHHHHHCCCCCCEEECCEEECCCCCCCEEEHHHHHHHHHHHHHHHHH
IAREIPAVSALITRVLLFAHHGWLPLVVAITVINGIAEELFFRGALYTALGRYHPVLIST
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLYTAATMAAGNPMLGFAAVILGTVCALERRASGGVLAPVLTHCGWGLIMVLALPPVFGL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA