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The map label for this gene is dapL [H]

Identifier: 41408704

GI number: 41408704

Start: 2938482

End: 2939600

Strand: Reverse

Name: dapL [H]

Synonym: MAP2606c

Alternate gene names: 41408704

Gene position: 2939600-2938482 (Counterclockwise)

Preceding gene: 41408705

Following gene: 41408703

Centisome position: 60.86

GC content: 74.62

Gene sequence:

>1119_bases
GTGCCACACCAGCTCAGGAAGCGTCGCCCGGCCGTCTCGGCGGCCCTGCCGGAGTTTCCCTGGGACACGCTGGCCGAGGC
CAAGGCGCTGGCCGGTTCGCATCCCGACGGCATCGTCGACCTGTCCGTCGGCACCCCCGTCGACCCGGTGGCGCCCGTGA
TCCAGCAGGCGCTGGCCGCCGCCGGCTCGGCGTCCGGATACCCCGCCACCGCGGGCACCGCCCGGCTGCGGGACTCGGCG
GTGGCCGCCCTGGCCCGCCGGTTCGGGGTCGTCGGGCTGACCGAGGCCAGCGTGCTGCCGGTGATCGGCAGCAAGGAGCT
CATCGCGTGGCTGCCCACCTTGCTGGGCCTGGGGCCGGCGGACCTGATCGTGGTGCCCGAGCTGGCGTATCCGACCTACG
ACGTCGGCGCCCGGCTGGCCGGGGCGTGGGTGCTGCGCGCGGACTCGCTGACCCAGGTGGGCCCGCAATCCCCGGCGCTG
TACTACCTGAACTCCCCGAGCAACCCGACCGGGCGGGTGCTGGGCGTCGATCATCTGCGCAAGGTGGTGGCATGGGCCCG
CGACCGGGGCTGCCTGGTGGCCTCCGACGAGTGCTATCTGGGATTGGGCTGGGACGCGCAGCCGCTGTCGATCCTGCATC
CGCAGGTCTGCGACGGCGACCCCACCGGGCTGCTCGCGATCCACTCGCTGTCCAAGAGCTCGTCGCTGGCCGGCTACCGG
GCCGGTTTCGTCGCCGGGGACGCCGAGCTGATCGCCGAGCTGCTGGCGGTGCGCAAGCACGCCGGGATGATGGTGCCGAC
GCCGGTGCAGGCGGCCATGGTGGCCGCCCTCGACGACGACGCGCACGAGCGGACGCAGCGGCAGCGCTATGAACGGCGCC
GGGCCGCCCTGTTGCCCGCGCTGCGGTCGGCCGGCTTCGCCGTCGACCATTCCGAAGCCGGCCTGTATCTGTGGGTCACC
CGCGGCGAGCCGTGCCGGGACACGATCACCTGGCTGGCGCGGCGCGGCATTCTGGCGGCGCCCGGCGAGTTCTACGGCCC
GCGCGGCGCGCAGCACGTGCGGGTCGCGCTGACGGCCGACGACGAGCGCATCGCCGCCGCGGTGCGCCGGCTCGCCTGA

Upstream 100 bases:

>100_bases
TGGGATCGCCCGGCGGGGCGGCCAAGGTCGGGCTGACCGAGAACGACCCGCAGGTGGTCAAGGACCTGCCACCGCAAGGC
GAAGGCGACTGAGCGGCCCG

Downstream 100 bases:

>100_bases
TCGCACCGGCTCGCCTGATCGCACCGGCGGCCGTGCGGGCGTGCACAATGCTCGGAGGCGTCTCACATAAGGACGGTGCT
CGTGACCAGTTCGACCGGCA

Product: N-succinyldiaminopimelate aminotransferase

Products: NA

Alternate protein names: DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase [H]

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MPHQLRKRRPAVSAALPEFPWDTLAEAKALAGSHPDGIVDLSVGTPVDPVAPVIQQALAAAGSASGYPATAGTARLRDSA
VAALARRFGVVGLTEASVLPVIGSKELIAWLPTLLGLGPADLIVVPELAYPTYDVGARLAGAWVLRADSLTQVGPQSPAL
YYLNSPSNPTGRVLGVDHLRKVVAWARDRGCLVASDECYLGLGWDAQPLSILHPQVCDGDPTGLLAIHSLSKSSSLAGYR
AGFVAGDAELIAELLAVRKHAGMMVPTPVQAAMVAALDDDAHERTQRQRYERRRAALLPALRSAGFAVDHSEAGLYLWVT
RGEPCRDTITWLARRGILAAPGEFYGPRGAQHVRVALTADDERIAAAVRRLA

Sequences:

>Translated_372_residues
MPHQLRKRRPAVSAALPEFPWDTLAEAKALAGSHPDGIVDLSVGTPVDPVAPVIQQALAAAGSASGYPATAGTARLRDSA
VAALARRFGVVGLTEASVLPVIGSKELIAWLPTLLGLGPADLIVVPELAYPTYDVGARLAGAWVLRADSLTQVGPQSPAL
YYLNSPSNPTGRVLGVDHLRKVVAWARDRGCLVASDECYLGLGWDAQPLSILHPQVCDGDPTGLLAIHSLSKSSSLAGYR
AGFVAGDAELIAELLAVRKHAGMMVPTPVQAAMVAALDDDAHERTQRQRYERRRAALLPALRSAGFAVDHSEAGLYLWVT
RGEPCRDTITWLARRGILAAPGEFYGPRGAQHVRVALTADDERIAAAVRRLA
>Mature_371_residues
PHQLRKRRPAVSAALPEFPWDTLAEAKALAGSHPDGIVDLSVGTPVDPVAPVIQQALAAAGSASGYPATAGTARLRDSAV
AALARRFGVVGLTEASVLPVIGSKELIAWLPTLLGLGPADLIVVPELAYPTYDVGARLAGAWVLRADSLTQVGPQSPALY
YLNSPSNPTGRVLGVDHLRKVVAWARDRGCLVASDECYLGLGWDAQPLSILHPQVCDGDPTGLLAIHSLSKSSSLAGYRA
GFVAGDAELIAELLAVRKHAGMMVPTPVQAAMVAALDDDAHERTQRQRYERRRAALLPALRSAGFAVDHSEAGLYLWVTR
GEPCRDTITWLARRGILAAPGEFYGPRGAQHVRVALTADDERIAAAVRRLA

Specific function: Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate, a reaction that requires three enzymes in E.coli

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. LL-diaminopimelate aminotransferase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788722, Length=388, Percent_Identity=30.4123711340206, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1786816, Length=387, Percent_Identity=22.9974160206718, Blast_Score=61, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR019881
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.83 [H]

Molecular weight: Translated: 39373; Mature: 39241

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHQLRKRRPAVSAALPEFPWDTLAEAKALAGSHPDGIVDLSVGTPVDPVAPVIQQALAA
CCCHHHHHCCCHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
AGSASGYPATAGTARLRDSAVAALARRFGVVGLTEASVLPVIGSKELIAWLPTLLGLGPA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCEEECCCCHHHHHHHHHHHCCCCC
DLIVVPELAYPTYDVGARLAGAWVLRADSLTQVGPQSPALYYLNSPSNPTGRVLGVDHLR
CEEEECCCCCCCHHHHHHHHHHEEEECCCHHHCCCCCCEEEEECCCCCCCCCEECHHHHH
KVVAWARDRGCLVASDECYLGLGWDAQPLSILHPQVCDGDPTGLLAIHSLSKSSSLAGYR
HHHHHHCCCCCEEECCCEEEECCCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCHH
AGFVAGDAELIAELLAVRKHAGMMVPTPVQAAMVAALDDDAHERTQRQRYERRRAALLPA
CCEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LRSAGFAVDHSEAGLYLWVTRGEPCRDTITWLARRGILAAPGEFYGPRGAQHVRVALTAD
HHHCCCEEECCCCCEEEEEECCCCHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEEEECC
DERIAAAVRRLA
HHHHHHHHHHCC
>Mature Secondary Structure 
PHQLRKRRPAVSAALPEFPWDTLAEAKALAGSHPDGIVDLSVGTPVDPVAPVIQQALAA
CCHHHHHCCCHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
AGSASGYPATAGTARLRDSAVAALARRFGVVGLTEASVLPVIGSKELIAWLPTLLGLGPA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCEEECCCCHHHHHHHHHHHCCCCC
DLIVVPELAYPTYDVGARLAGAWVLRADSLTQVGPQSPALYYLNSPSNPTGRVLGVDHLR
CEEEECCCCCCCHHHHHHHHHHEEEECCCHHHCCCCCCEEEEECCCCCCCCCEECHHHHH
KVVAWARDRGCLVASDECYLGLGWDAQPLSILHPQVCDGDPTGLLAIHSLSKSSSLAGYR
HHHHHHCCCCCEEECCCEEEECCCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCHH
AGFVAGDAELIAELLAVRKHAGMMVPTPVQAAMVAALDDDAHERTQRQRYERRRAALLPA
CCEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LRSAGFAVDHSEAGLYLWVTRGEPCRDTITWLARRGILAAPGEFYGPRGAQHVRVALTAD
HHHCCCEEECCCCCEEEEEECCCCHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEEEECC
DERIAAAVRRLA
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA