| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41408695
Identifier: 41408695
GI number: 41408695
Start: 2923371
End: 2923703
Strand: Reverse
Name: 41408695
Synonym: MAP2597c
Alternate gene names: NA
Gene position: 2923703-2923371 (Counterclockwise)
Preceding gene: 41408696
Following gene: 41408691
Centisome position: 60.53
GC content: 63.06
Gene sequence:
>333_bases ATGAGCAGCGACCACGACAACAACGGCAAGGCGATCAAGATCAACGTCTGGATCAACGAGGAGCGGCTGGAGGCGCTGGC CAACGCGGGGATGGCCGAGCTGGCCAACGAGGCGTTCGCGGGCATGAAGCTGCTGGAGATCCACACCACCGAAGAGCAGA AAAACATTGTTCTGCAACGGTTTCCGGGGGCGAAGTACGACTCGCCCACCACCCGGTCCATCGAGCTGCTGCCCAAGCAG GCCAAGGACCGGCTGTTGGAGCTGTCGATCGCGATGCATTCCACCGGCCCCGACGTGATGGGCCGTTTCCTGGAGGAGAC CGAGCCGGCGTAG
Upstream 100 bases:
>100_bases TGGAGTGCGCCGCCAAGCACGGTCAGGGTTCGCCGTTCGTCACCGAGGAGTATCTGGCCAACAGGCTTCCGGTCTTCACA CTCAACCAGCTGGAGGGCTC
Downstream 100 bases:
>100_bases CGCCGGACGCTCAGCCGTCCAACCGGATGAAGGCACCCCGGAGGTAGTGCTCGACGCAGGCCGCCCGCCGGATCTTGCCG CTGGTCGTGGTGGGAATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MSSDHDNNGKAIKINVWINEERLEALANAGMAELANEAFAGMKLLEIHTTEEQKNIVLQRFPGAKYDSPTTRSIELLPKQ AKDRLLELSIAMHSTGPDVMGRFLEETEPA
Sequences:
>Translated_110_residues MSSDHDNNGKAIKINVWINEERLEALANAGMAELANEAFAGMKLLEIHTTEEQKNIVLQRFPGAKYDSPTTRSIELLPKQ AKDRLLELSIAMHSTGPDVMGRFLEETEPA >Mature_109_residues SSDHDNNGKAIKINVWINEERLEALANAGMAELANEAFAGMKLLEIHTTEEQKNIVLQRFPGAKYDSPTTRSIELLPKQA KDRLLELSIAMHSTGPDVMGRFLEETEPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12249; Mature: 12118
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSDHDNNGKAIKINVWINEERLEALANAGMAELANEAFAGMKLLEIHTTEEQKNIVLQR CCCCCCCCCCEEEEEEEECHHHHHHHHCCCHHHHHHHHHCCEEEEEEECCCCHHCEEEEC FPGAKYDSPTTRSIELLPKQAKDRLLELSIAMHSTGPDVMGRFLEETEPA CCCCCCCCCCCCHHEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC >Mature Secondary Structure SSDHDNNGKAIKINVWINEERLEALANAGMAELANEAFAGMKLLEIHTTEEQKNIVLQR CCCCCCCCCEEEEEEEECHHHHHHHHCCCHHHHHHHHHCCEEEEEEECCCCHHCEEEEC FPGAKYDSPTTRSIELLPKQAKDRLLELSIAMHSTGPDVMGRFLEETEPA CCCCCCCCCCCCHHEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA