| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is putA [C]
Identifier: 41408690
GI number: 41408690
Start: 2915211
End: 2916173
Strand: Reverse
Name: putA [C]
Synonym: MAP2592c
Alternate gene names: 41408690
Gene position: 2916173-2915211 (Counterclockwise)
Preceding gene: 41408691
Following gene: 41408681
Centisome position: 60.38
GC content: 71.13
Gene sequence:
>963_bases ATGGCCGGGCTGTTCGCCCACACCCTGCGTCCGGCGATCCTGGCCGCGGGCCGGCGACCGGGGTTGCGCCGGGCCGCCGA AGCGCTGCCGGTCACCCGCCGGGTGGTGCACCGGTTCATCGCCGGGGAGACAATCGATTCCGCGCTGGACAGCGTGACGG CCCTTCGTGATTCGGGACGCTGCGTCAGCGTCGACCATCTGGGCGAGGACGTGTCGGACGCCGACGACGCCGATGCGGCG GTGCGGGTGTATCTGGAGCTCGTCGACCGCCTGGGCTGCCTCGGCGATGGGGCGGCCGTCCGGCCGCTCGAGGTGTCGCT GAAACTGTCCGCGCTGGGCCAGTCGCTGGATCGCGACGGTGAGAAGATCGCCCGGGAGAATGCGTGGGCGATCTGCGCGG CCGCGCAGCGGGCCGGCGTGTGGGTGACGGTGGACGCCGAGGACCACACCACGACCGATTCGACCCTGCGCATCGTGCGC GACCTGCGGCGCGAATTCGATTGGCTGGGTGTGGCATTGCAGGCCTACCTGCGGCGCACGCTCGGCGACTGCGAGGAGTT CGCCGCCGCCGGCGCGCGGGTGCGGCTGTGCAAGGGCGCCTACGACGAGCCCGCCTCGCTGGCCTACCGCGATCCCGCCG CGGTCACCGATTCCTACCTGCGCTGCCTGCGGGTGTTGATGGCCGGTTCGGGCTATCCGATGGTGGCCTCCCACGATCCG GCGATCATCGAGGCGGCGCCGTCGCTGGCCCGCGAATCAGGGCGTGGCACCGGTGAATTCGAGTACCAGATGCTGTACGG CATCCGCGACGACGAGCAGCGGCGGCTGGCCGAGGCCGGCCACACCGTCCGGGTCTACGTACCCTTCGGCACCCAGTGGT ACGGCTACTTCATGCGCCGGCTCGCCGAACGCCCGGCCAACCTGACATTCTTTTTGCGCGCGCTGGCCGCGCGTCGGCAT TGA
Upstream 100 bases:
>100_bases GCTCTCCGTTGAACCTGCTGCGCTGGACGTCGGCCCGCACCATCAAGGAGACGTTCGTCCCGGCCACCGACCACACCTAT CCGCACATGGCGGCCGACTG
Downstream 100 bases:
>100_bases GTGTGCGGTCCGGGGCTTGCGGAGTTGCATCAGGTCGACGACACGCCGACGATGCCCGCCGCCGCTACACACTCAACGCC GAGGATGCACACTCACCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: PRODH 2; Proline oxidase 2 [H]
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MAGLFAHTLRPAILAAGRRPGLRRAAEALPVTRRVVHRFIAGETIDSALDSVTALRDSGRCVSVDHLGEDVSDADDADAA VRVYLELVDRLGCLGDGAAVRPLEVSLKLSALGQSLDRDGEKIARENAWAICAAAQRAGVWVTVDAEDHTTTDSTLRIVR DLRREFDWLGVALQAYLRRTLGDCEEFAAAGARVRLCKGAYDEPASLAYRDPAAVTDSYLRCLRVLMAGSGYPMVASHDP AIIEAAPSLARESGRGTGEFEYQMLYGIRDDEQRRLAEAGHTVRVYVPFGTQWYGYFMRRLAERPANLTFFLRALAARRH
Sequences:
>Translated_320_residues MAGLFAHTLRPAILAAGRRPGLRRAAEALPVTRRVVHRFIAGETIDSALDSVTALRDSGRCVSVDHLGEDVSDADDADAA VRVYLELVDRLGCLGDGAAVRPLEVSLKLSALGQSLDRDGEKIARENAWAICAAAQRAGVWVTVDAEDHTTTDSTLRIVR DLRREFDWLGVALQAYLRRTLGDCEEFAAAGARVRLCKGAYDEPASLAYRDPAAVTDSYLRCLRVLMAGSGYPMVASHDP AIIEAAPSLARESGRGTGEFEYQMLYGIRDDEQRRLAEAGHTVRVYVPFGTQWYGYFMRRLAERPANLTFFLRALAARRH >Mature_319_residues AGLFAHTLRPAILAAGRRPGLRRAAEALPVTRRVVHRFIAGETIDSALDSVTALRDSGRCVSVDHLGEDVSDADDADAAV RVYLELVDRLGCLGDGAAVRPLEVSLKLSALGQSLDRDGEKIARENAWAICAAAQRAGVWVTVDAEDHTTTDSTLRIVRD LRREFDWLGVALQAYLRRTLGDCEEFAAAGARVRLCKGAYDEPASLAYRDPAAVTDSYLRCLRVLMAGSGYPMVASHDPA IIEAAPSLARESGRGTGEFEYQMLYGIRDDEQRRLAEAGHTVRVYVPFGTQWYGYFMRRLAERPANLTFFLRALAARRH
Specific function: Catalyzes the oxidation of L-proline to delta-1- pyrroline-5-carboxylate (P5C) [H]
COG id: COG0506
COG function: function code E; Proline dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the proline dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1787250, Length=338, Percent_Identity=26.9230769230769, Blast_Score=72, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015590 - InterPro: IPR002872 - InterPro: IPR008219 [H]
Pfam domain/function: PF01619 Pro_dh [H]
EC number: =1.5.99.8 [H]
Molecular weight: Translated: 35150; Mature: 35019
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLFAHTLRPAILAAGRRPGLRRAAEALPVTRRVVHRFIAGETIDSALDSVTALRDSGR CCCHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCC CVSVDHLGEDVSDADDADAAVRVYLELVDRLGCLGDGAAVRPLEVSLKLSALGQSLDRDG EEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHCCCH EKIARENAWAICAAAQRAGVWVTVDAEDHTTTDSTLRIVRDLRREFDWLGVALQAYLRRT HHHHHHCCHHHEEHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGDCEEFAAAGARVRLCKGAYDEPASLAYRDPAAVTDSYLRCLRVLMAGSGYPMVASHDP HCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCC AIIEAAPSLARESGRGTGEFEYQMLYGIRDDEQRRLAEAGHTVRVYVPFGTQWYGYFMRR HHHHHCHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHH LAERPANLTFFLRALAARRH HHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure AGLFAHTLRPAILAAGRRPGLRRAAEALPVTRRVVHRFIAGETIDSALDSVTALRDSGR CCHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCC CVSVDHLGEDVSDADDADAAVRVYLELVDRLGCLGDGAAVRPLEVSLKLSALGQSLDRDG EEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHCCCH EKIARENAWAICAAAQRAGVWVTVDAEDHTTTDSTLRIVRDLRREFDWLGVALQAYLRRT HHHHHHCCHHHEEHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGDCEEFAAAGARVRLCKGAYDEPASLAYRDPAAVTDSYLRCLRVLMAGSGYPMVASHDP HCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCC AIIEAAPSLARESGRGTGEFEYQMLYGIRDDEQRRLAEAGHTVRVYVPFGTQWYGYFMRR HHHHHCHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHH LAERPANLTFFLRALAARRH HHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA