| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is sugA
Identifier: 41408645
GI number: 41408645
Start: 2864138
End: 2865073
Strand: Reverse
Name: sugA
Synonym: MAP2547c
Alternate gene names: 41408645
Gene position: 2865073-2864138 (Counterclockwise)
Preceding gene: 41408646
Following gene: 41408644
Centisome position: 59.32
GC content: 66.67
Gene sequence:
>936_bases GTGACGGCCACCCTCGGCGAAACACGCCCTACCCCAACGTCTTCCGCCGCGCCGAGCGTGCTGGGCCGGACATCCGAACA GCGGCTGGCGCTTGTGCTGGTTGCGCCGGCGGCGATTCTGATGCTGGCGGTGACGGCCTACCCGATCGGCTATGCGGTGT GGTTGAGCTTGCAGCGCAACAACCTTGCGGCTCCGCACGACACCGCGTTCGTCGGCCTGAGCAATTACGCGACCATCCTC AGCGACCGGTATTGGTGGACCGCGCTGGCGGTGACGCTGGGCATCACCGTGGTCTCGGTGTCCGCCGAATTCGTGCTGGG CCTGGCGCTGGCGCTGGTGATGCACCGCACCCTGATCGGCAAGGGCCTGGTGCGCACCGCGGTGCTGATCCCGTACGGCA TCGTCACCGCGGTCGCGTCCTACAGCTGGTACTACGCCTGGACGCCCGGGACCGGCTATCTGGCCAACCTGCTGCCGCAC GGCAGCGCCCCGCTGACCGCCCAGATCCCGTCGCTGGCAATCGTCGTGCTCGCCGAGGTCTGGAAGACGACGCCGTTCAT GTCGCTGCTGCTGCTGGCCGGTCTGGCGCTGGTGCCCGAGGACCTGCTCAAGGCGGCCCAGGTGGACGGCGCCGGCGCCT GGCGGCGGCTGACCCGCGTCACCCTGCCGATCATCAAGCCGGCGGTGGTGGTCGCGCTGTTGTTCCGAACCCTGGACGCC TTCCGAATTTTCGACAACATCTACGTTTTGACCAACGGCGCCAACAACACCGGTTCGGTGTCGATGCTGGGCTACGACAA CCTGTTCAAGGGTTTCAACGTGGGGCTGGGCTCGGCGATCAGCGTACTGATCTTCGGATGCGTGGGCCTGATCGCGCTGG TTTTCGTCAAGGTCTTCGGTGCGGCAGCACCCGGTGGTGACGTCGATGGCCGTTAA
Upstream 100 bases:
>100_bases CCGCGACGCTGAGCCCGATCACCGGGATCGACCCGGAGCGCACCGCCGACCAGCTCAGCGTCGAGGTGCAAAAGGCCGTC GACGGGAAGGGGCTGCTGCC
Downstream 100 bases:
>100_bases CCGAACCGCCGCGCGTCGCACAGTGCTCTGGGCCGTGATCGACACGCTGGTGGTGGTGTATGCGCTGCTTCCGGTGTTGT GGATCTTCAGCCTGTCGCTG
Product: SugA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MTATLGETRPTPTSSAAPSVLGRTSEQRLALVLVAPAAILMLAVTAYPIGYAVWLSLQRNNLAAPHDTAFVGLSNYATIL SDRYWWTALAVTLGITVVSVSAEFVLGLALALVMHRTLIGKGLVRTAVLIPYGIVTAVASYSWYYAWTPGTGYLANLLPH GSAPLTAQIPSLAIVVLAEVWKTTPFMSLLLLAGLALVPEDLLKAAQVDGAGAWRRLTRVTLPIIKPAVVVALLFRTLDA FRIFDNIYVLTNGANNTGSVSMLGYDNLFKGFNVGLGSAISVLIFGCVGLIALVFVKVFGAAAPGGDVDGR
Sequences:
>Translated_311_residues MTATLGETRPTPTSSAAPSVLGRTSEQRLALVLVAPAAILMLAVTAYPIGYAVWLSLQRNNLAAPHDTAFVGLSNYATIL SDRYWWTALAVTLGITVVSVSAEFVLGLALALVMHRTLIGKGLVRTAVLIPYGIVTAVASYSWYYAWTPGTGYLANLLPH GSAPLTAQIPSLAIVVLAEVWKTTPFMSLLLLAGLALVPEDLLKAAQVDGAGAWRRLTRVTLPIIKPAVVVALLFRTLDA FRIFDNIYVLTNGANNTGSVSMLGYDNLFKGFNVGLGSAISVLIFGCVGLIALVFVKVFGAAAPGGDVDGR >Mature_310_residues TATLGETRPTPTSSAAPSVLGRTSEQRLALVLVAPAAILMLAVTAYPIGYAVWLSLQRNNLAAPHDTAFVGLSNYATILS DRYWWTALAVTLGITVVSVSAEFVLGLALALVMHRTLIGKGLVRTAVLIPYGIVTAVASYSWYYAWTPGTGYLANLLPHG SAPLTAQIPSLAIVVLAEVWKTTPFMSLLLLAGLALVPEDLLKAAQVDGAGAWRRLTRVTLPIIKPAVVVALLFRTLDAF RIFDNIYVLTNGANNTGSVSMLGYDNLFKGFNVGLGSAISVLIFGCVGLIALVFVKVFGAAAPGGDVDGR
Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1175
COG function: function code G; ABC-type sugar transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787570, Length=247, Percent_Identity=33.1983805668016, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI1789861, Length=292, Percent_Identity=28.0821917808219, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1790465, Length=265, Percent_Identity=25.2830188679245, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32786; Mature: 32655
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATLGETRPTPTSSAAPSVLGRTSEQRLALVLVAPAAILMLAVTAYPIGYAVWLSLQRN CCCCCCCCCCCCCCCCCCHHHCCCCCHHEEEEEHHHHHHHHHHHHHHHCCEEEEEEECCC NLAAPHDTAFVGLSNYATILSDRYWWTALAVTLGITVVSVSAEFVLGLALALVMHRTLIG CCCCCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHH KGLVRTAVLIPYGIVTAVASYSWYYAWTPGTGYLANLLPHGSAPLTAQIPSLAIVVLAEV HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCCCCCEECCHHHHHHHHHHH WKTTPFMSLLLLAGLALVPEDLLKAAQVDGAGAWRRLTRVTLPIIKPAVVVALLFRTLDA HCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRIFDNIYVLTNGANNTGSVSMLGYDNLFKGFNVGLGSAISVLIFGCVGLIALVFVKVFG HHHHCCEEEEECCCCCCCCEEEECHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC AAAPGGDVDGR CCCCCCCCCCC >Mature Secondary Structure TATLGETRPTPTSSAAPSVLGRTSEQRLALVLVAPAAILMLAVTAYPIGYAVWLSLQRN CCCCCCCCCCCCCCCCCHHHCCCCCHHEEEEEHHHHHHHHHHHHHHHCCEEEEEEECCC NLAAPHDTAFVGLSNYATILSDRYWWTALAVTLGITVVSVSAEFVLGLALALVMHRTLIG CCCCCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHH KGLVRTAVLIPYGIVTAVASYSWYYAWTPGTGYLANLLPHGSAPLTAQIPSLAIVVLAEV HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCCCCCEECCHHHHHHHHHHH WKTTPFMSLLLLAGLALVPEDLLKAAQVDGAGAWRRLTRVTLPIIKPAVVVALLFRTLDA HCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRIFDNIYVLTNGANNTGSVSMLGYDNLFKGFNVGLGSAISVLIFGCVGLIALVFVKVFG HHHHCCEEEEECCCCCCCCEEEECHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC AAAPGGDVDGR CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]