Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is sugA

Identifier: 41408645

GI number: 41408645

Start: 2864138

End: 2865073

Strand: Reverse

Name: sugA

Synonym: MAP2547c

Alternate gene names: 41408645

Gene position: 2865073-2864138 (Counterclockwise)

Preceding gene: 41408646

Following gene: 41408644

Centisome position: 59.32

GC content: 66.67

Gene sequence:

>936_bases
GTGACGGCCACCCTCGGCGAAACACGCCCTACCCCAACGTCTTCCGCCGCGCCGAGCGTGCTGGGCCGGACATCCGAACA
GCGGCTGGCGCTTGTGCTGGTTGCGCCGGCGGCGATTCTGATGCTGGCGGTGACGGCCTACCCGATCGGCTATGCGGTGT
GGTTGAGCTTGCAGCGCAACAACCTTGCGGCTCCGCACGACACCGCGTTCGTCGGCCTGAGCAATTACGCGACCATCCTC
AGCGACCGGTATTGGTGGACCGCGCTGGCGGTGACGCTGGGCATCACCGTGGTCTCGGTGTCCGCCGAATTCGTGCTGGG
CCTGGCGCTGGCGCTGGTGATGCACCGCACCCTGATCGGCAAGGGCCTGGTGCGCACCGCGGTGCTGATCCCGTACGGCA
TCGTCACCGCGGTCGCGTCCTACAGCTGGTACTACGCCTGGACGCCCGGGACCGGCTATCTGGCCAACCTGCTGCCGCAC
GGCAGCGCCCCGCTGACCGCCCAGATCCCGTCGCTGGCAATCGTCGTGCTCGCCGAGGTCTGGAAGACGACGCCGTTCAT
GTCGCTGCTGCTGCTGGCCGGTCTGGCGCTGGTGCCCGAGGACCTGCTCAAGGCGGCCCAGGTGGACGGCGCCGGCGCCT
GGCGGCGGCTGACCCGCGTCACCCTGCCGATCATCAAGCCGGCGGTGGTGGTCGCGCTGTTGTTCCGAACCCTGGACGCC
TTCCGAATTTTCGACAACATCTACGTTTTGACCAACGGCGCCAACAACACCGGTTCGGTGTCGATGCTGGGCTACGACAA
CCTGTTCAAGGGTTTCAACGTGGGGCTGGGCTCGGCGATCAGCGTACTGATCTTCGGATGCGTGGGCCTGATCGCGCTGG
TTTTCGTCAAGGTCTTCGGTGCGGCAGCACCCGGTGGTGACGTCGATGGCCGTTAA

Upstream 100 bases:

>100_bases
CCGCGACGCTGAGCCCGATCACCGGGATCGACCCGGAGCGCACCGCCGACCAGCTCAGCGTCGAGGTGCAAAAGGCCGTC
GACGGGAAGGGGCTGCTGCC

Downstream 100 bases:

>100_bases
CCGAACCGCCGCGCGTCGCACAGTGCTCTGGGCCGTGATCGACACGCTGGTGGTGGTGTATGCGCTGCTTCCGGTGTTGT
GGATCTTCAGCCTGTCGCTG

Product: SugA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MTATLGETRPTPTSSAAPSVLGRTSEQRLALVLVAPAAILMLAVTAYPIGYAVWLSLQRNNLAAPHDTAFVGLSNYATIL
SDRYWWTALAVTLGITVVSVSAEFVLGLALALVMHRTLIGKGLVRTAVLIPYGIVTAVASYSWYYAWTPGTGYLANLLPH
GSAPLTAQIPSLAIVVLAEVWKTTPFMSLLLLAGLALVPEDLLKAAQVDGAGAWRRLTRVTLPIIKPAVVVALLFRTLDA
FRIFDNIYVLTNGANNTGSVSMLGYDNLFKGFNVGLGSAISVLIFGCVGLIALVFVKVFGAAAPGGDVDGR

Sequences:

>Translated_311_residues
MTATLGETRPTPTSSAAPSVLGRTSEQRLALVLVAPAAILMLAVTAYPIGYAVWLSLQRNNLAAPHDTAFVGLSNYATIL
SDRYWWTALAVTLGITVVSVSAEFVLGLALALVMHRTLIGKGLVRTAVLIPYGIVTAVASYSWYYAWTPGTGYLANLLPH
GSAPLTAQIPSLAIVVLAEVWKTTPFMSLLLLAGLALVPEDLLKAAQVDGAGAWRRLTRVTLPIIKPAVVVALLFRTLDA
FRIFDNIYVLTNGANNTGSVSMLGYDNLFKGFNVGLGSAISVLIFGCVGLIALVFVKVFGAAAPGGDVDGR
>Mature_310_residues
TATLGETRPTPTSSAAPSVLGRTSEQRLALVLVAPAAILMLAVTAYPIGYAVWLSLQRNNLAAPHDTAFVGLSNYATILS
DRYWWTALAVTLGITVVSVSAEFVLGLALALVMHRTLIGKGLVRTAVLIPYGIVTAVASYSWYYAWTPGTGYLANLLPHG
SAPLTAQIPSLAIVVLAEVWKTTPFMSLLLLAGLALVPEDLLKAAQVDGAGAWRRLTRVTLPIIKPAVVVALLFRTLDAF
RIFDNIYVLTNGANNTGSVSMLGYDNLFKGFNVGLGSAISVLIFGCVGLIALVFVKVFGAAAPGGDVDGR

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=247, Percent_Identity=33.1983805668016, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1789861, Length=292, Percent_Identity=28.0821917808219, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1790465, Length=265, Percent_Identity=25.2830188679245, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32786; Mature: 32655

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATLGETRPTPTSSAAPSVLGRTSEQRLALVLVAPAAILMLAVTAYPIGYAVWLSLQRN
CCCCCCCCCCCCCCCCCCHHHCCCCCHHEEEEEHHHHHHHHHHHHHHHCCEEEEEEECCC
NLAAPHDTAFVGLSNYATILSDRYWWTALAVTLGITVVSVSAEFVLGLALALVMHRTLIG
CCCCCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHH
KGLVRTAVLIPYGIVTAVASYSWYYAWTPGTGYLANLLPHGSAPLTAQIPSLAIVVLAEV
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCCCCCEECCHHHHHHHHHHH
WKTTPFMSLLLLAGLALVPEDLLKAAQVDGAGAWRRLTRVTLPIIKPAVVVALLFRTLDA
HCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRIFDNIYVLTNGANNTGSVSMLGYDNLFKGFNVGLGSAISVLIFGCVGLIALVFVKVFG
HHHHCCEEEEECCCCCCCCEEEECHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
AAAPGGDVDGR
CCCCCCCCCCC
>Mature Secondary Structure 
TATLGETRPTPTSSAAPSVLGRTSEQRLALVLVAPAAILMLAVTAYPIGYAVWLSLQRN
CCCCCCCCCCCCCCCCCHHHCCCCCHHEEEEEHHHHHHHHHHHHHHHCCEEEEEEECCC
NLAAPHDTAFVGLSNYATILSDRYWWTALAVTLGITVVSVSAEFVLGLALALVMHRTLIG
CCCCCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHH
KGLVRTAVLIPYGIVTAVASYSWYYAWTPGTGYLANLLPHGSAPLTAQIPSLAIVVLAEV
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCCCCCEECCHHHHHHHHHHH
WKTTPFMSLLLLAGLALVPEDLLKAAQVDGAGAWRRLTRVTLPIIKPAVVVALLFRTLDA
HCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRIFDNIYVLTNGANNTGSVSMLGYDNLFKGFNVGLGSAISVLIFGCVGLIALVFVKVFG
HHHHCCEEEEECCCCCCCCEEEECHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
AAAPGGDVDGR
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]