Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408604

Identifier: 41408604

GI number: 41408604

Start: 2814725

End: 2815300

Strand: Reverse

Name: 41408604

Synonym: MAP2506c

Alternate gene names: NA

Gene position: 2815300-2814725 (Counterclockwise)

Preceding gene: 41408605

Following gene: 41408596

Centisome position: 58.29

GC content: 69.79

Gene sequence:

>576_bases
ATGAAAGCACATCACGCACACCGGCGGTACGGCCGCCCCGGCGGCTGGCAGCAGGCCCAGCAGCCCGATGCCAGCGACGC
TGCGGAATGGTTCGCCGGGCGTCTCCCGGAACAGTGGTTTGACGGCGACCCGACGGTGATCGTCGACCGCGAGGAGATCA
CCGTCATCGGAAAGCTCCCCGAGCCGGCCGACGCCGAGAAGGAGGCGAGCGAGGCCCGCGCAGCCGGCCGGGCATCGCGA
TTCCGCGAAGAGACCCGCTCCGAGCGAATGCGCATCGCCGACGAAGCCCAGGATCGCTACGGGCGCAAGGTTTCCTGGGG
TGTCGAGGTCGGCTCCAAGACGGGCACCGAGCGAATCCTGTTCACCCACATCGCCGTACCCGTGATGACCCGGCTCAAGC
AACCGGAACGCCAGGTGCTCGACACGCTGGTCGACGCCGGTGTCGCCCGGTCCCGCGCCGACGCGCTGGCGTGGTCGGTG
AAGCTGGTCGGTGAACACGCCGAGGAGTGGCTGGCTCAACTGCGCGACGCCATGTCCGCGGTCGACGACCTGCGCGCGCA
GGGCCCCGACCTGTAG

Upstream 100 bases:

>100_bases
CGGCCCCGGTATGCAGCGGTGACCGGGCCGTGACCGGCCGTCTTTCGCTGCGGGTGAACGGCCGTTCCCTTTGCAGCTGT
AACGGTGTGATCATGTAATC

Downstream 100 bases:

>100_bases
CGCGAAAAGCGCTGCACTCCAAGGGCATTTGCGTGCAGGCGACCGCTTACTCGTTGTCGATCTTGGCGACGATCTTGTCG
GCGATCTGATCGCCCTGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MKAHHAHRRYGRPGGWQQAQQPDASDAAEWFAGRLPEQWFDGDPTVIVDREEITVIGKLPEPADAEKEASEARAAGRASR
FREETRSERMRIADEAQDRYGRKVSWGVEVGSKTGTERILFTHIAVPVMTRLKQPERQVLDTLVDAGVARSRADALAWSV
KLVGEHAEEWLAQLRDAMSAVDDLRAQGPDL

Sequences:

>Translated_191_residues
MKAHHAHRRYGRPGGWQQAQQPDASDAAEWFAGRLPEQWFDGDPTVIVDREEITVIGKLPEPADAEKEASEARAAGRASR
FREETRSERMRIADEAQDRYGRKVSWGVEVGSKTGTERILFTHIAVPVMTRLKQPERQVLDTLVDAGVARSRADALAWSV
KLVGEHAEEWLAQLRDAMSAVDDLRAQGPDL
>Mature_191_residues
MKAHHAHRRYGRPGGWQQAQQPDASDAAEWFAGRLPEQWFDGDPTVIVDREEITVIGKLPEPADAEKEASEARAAGRASR
FREETRSERMRIADEAQDRYGRKVSWGVEVGSKTGTERILFTHIAVPVMTRLKQPERQVLDTLVDAGVARSRADALAWSV
KLVGEHAEEWLAQLRDAMSAVDDLRAQGPDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21379; Mature: 21379

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAHHAHRRYGRPGGWQQAQQPDASDAAEWFAGRLPEQWFDGDPTVIVDREEITVIGKLP
CCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCEEEEECCCEEEEECCC
EPADAEKEASEARAAGRASRFREETRSERMRIADEAQDRYGRKVSWGVEVGSKTGTERIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECEECCCCCCCHHHH
FTHIAVPVMTRLKQPERQVLDTLVDAGVARSRADALAWSVKLVGEHAEEWLAQLRDAMSA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDDLRAQGPDL
HHHHHHCCCCC
>Mature Secondary Structure
MKAHHAHRRYGRPGGWQQAQQPDASDAAEWFAGRLPEQWFDGDPTVIVDREEITVIGKLP
CCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCEEEEECCCEEEEECCC
EPADAEKEASEARAAGRASRFREETRSERMRIADEAQDRYGRKVSWGVEVGSKTGTERIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECEECCCCCCCHHHH
FTHIAVPVMTRLKQPERQVLDTLVDAGVARSRADALAWSVKLVGEHAEEWLAQLRDAMSA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDDLRAQGPDL
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]