| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408547
Identifier: 41408547
GI number: 41408547
Start: 2755099
End: 2755542
Strand: Reverse
Name: 41408547
Synonym: MAP2449c
Alternate gene names: NA
Gene position: 2755542-2755099 (Counterclockwise)
Preceding gene: 41408548
Following gene: 41408545
Centisome position: 57.05
GC content: 69.82
Gene sequence:
>444_bases ATGAGCGCGCCCATGGCCGGCATGGTCGTGCTCGTCGTCGTGCTGGCGGCCGCCGTCATCGCGCTGAGTTATCGGCTGTG GAAGCTGCGTCAGGGCGGCACGGCGGGGATCATGCGAGACATTCCCGCGGTCGGCGGTCACGGCTGGCGGCACGGGGTGA TCCGTTACCGCGGCGGTGAGGCCGCGTTCTATCGGCTGTCCAGCCTGCGGCTGTGGCCGGACCGTCGGCTGAGCCGGCGC GGTGTGGAGATCGTGTCCCGCCGCGCGCCGCGCGGCGACGAGTTCGACATCATGACCGACGAGATCGTCGTCATCGAGCT GCGCGACACCACCCAGGACCGCAGGTCCGGCTACGAGATCGCGTTCGACAAGGGCGCGTTGACGGCGTTTTTGTCCTGGC TGGAGTCGCGTCCGTCGCCCCGGTCACGTCGCCGCAGCCTCTAG
Upstream 100 bases:
>100_bases CCAGAGAGGCCGCCGAGTCGGACGATCCTCGTGTCGCCGCCCGGGGGCGCGCGAGATTGCGCGCCGTCGGCGCGATCGAC TAGCCGCCTCGGATGCAACG
Downstream 100 bases:
>100_bases CCGGGAGCGGGCTCGCCGCCTTGTTGACCGCCCGGTTTCCACAGCACGTCACCGTCCGGGTTGGCCACCCGGGACAGGAT GAACAACAGGTCCGAGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSAPMAGMVVLVVVLAAAVIALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFYRLSSLRLWPDRRLSRR GVEIVSRRAPRGDEFDIMTDEIVVIELRDTTQDRRSGYEIAFDKGALTAFLSWLESRPSPRSRRRSL
Sequences:
>Translated_147_residues MSAPMAGMVVLVVVLAAAVIALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFYRLSSLRLWPDRRLSRR GVEIVSRRAPRGDEFDIMTDEIVVIELRDTTQDRRSGYEIAFDKGALTAFLSWLESRPSPRSRRRSL >Mature_146_residues SAPMAGMVVLVVVLAAAVIALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFYRLSSLRLWPDRRLSRRG VEIVSRRAPRGDEFDIMTDEIVVIELRDTTQDRRSGYEIAFDKGALTAFLSWLESRPSPRSRRRSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv1312 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019675 [H]
Pfam domain/function: PF10739 DUF2550 [H]
EC number: NA
Molecular weight: Translated: 16583; Mature: 16452
Theoretical pI: Translated: 11.72; Mature: 11.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPMAGMVVLVVVLAAAVIALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCEEEEECCC AAFYRLSSLRLWPDRRLSRRGVEIVSRRAPRGDEFDIMTDEIVVIELRDTTQDRRSGYEI EEEEEHHHCEECCCHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEEECCCCCHHHCCCEE AFDKGALTAFLSWLESRPSPRSRRRSL EECCHHHHHHHHHHHCCCCCHHHCCCC >Mature Secondary Structure SAPMAGMVVLVVVLAAAVIALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCEEEEECCC AAFYRLSSLRLWPDRRLSRRGVEIVSRRAPRGDEFDIMTDEIVVIELRDTTQDRRSGYEI EEEEEHHHCEECCCHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEEECCCCCHHHCCCEE AFDKGALTAFLSWLESRPSPRSRRRSL EECCHHHHHHHHHHHCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]