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The map label for this gene is 41408537

Identifier: 41408537

GI number: 41408537

Start: 2738385

End: 2739065

Strand: Reverse

Name: 41408537

Synonym: MAP2439c

Alternate gene names: NA

Gene position: 2739065-2738385 (Counterclockwise)

Preceding gene: 41408539

Following gene: 41408536

Centisome position: 56.71

GC content: 67.84

Gene sequence:

>681_bases
GTGAGTCGGGTGCGTCTAGTGATCGCCCAGTGCACCGTGGATTACGTCGGCCGGCTCACCGCGCATCTGCCGTCGGCGCG
CAGGCTGCTGCTGTTCAAGGCCGACGGATCGGTCAGCGTGCACGCCGACGACCGTGCCTACAAGCCGTTGAACTGGATGA
GCCCGCCGTGCTGGCTGCGCGAGGAGGCTGGCGATGCGGCGCCGGTGTGGGTGGTGGAGAACAAGGCCGGCGAGCAGCTC
CGCATCACCGTCGAGGACATCGAGCACGACTCCAGCCACGACCTCGGCGTCGATCCCGGCCTGGTCAAGGACGGCGTCGA
GGCGCACCTGCAGGCCCTGCTCGCCGAGCACGTGCAACTGCTGGGCGAGGGGTACACGCTGGTCCGCCGCGAGTACATGA
CCGCCATCGGGCCGGTCGATCTGCTCTGCCGCGACGAGCGCGGCGGGTCGGTGGCGGTGGAGATCAAACGGCGCGGCGAG
ATCGACGGCGTGGAACAGCTCACCCGCTACCTCGAGCTGCTCAACCGTGACAGCGTGCTGGCGCCGGTGCGCGGCGTGTT
CGCCGCGCAGCAGATCAAACCGCAAGCCCGCACGCTGGCCACCGATCGCGGTATCCGTTGTGTGACATTGGATTACGACA
AGATGCGCGGGATGGACAGCGACGAATACCGGCTGTTCTAG

Upstream 100 bases:

>100_bases
TTTGCCGGGTGATCTTTTCGAGCACCCGGCCGATGCGTTGTGCCGTGCTCTGCGTGGCCGACATGGTGGCGTCAGCCTAA
TTTGTCGGCCACGCTCTAAG

Downstream 100 bases:

>100_bases
GGCCTCGCCCCTACACTGGTCGCATGGCTCGGCGCCGCACACCGCCCCGCCGGCAACGGCTGCTCGGGCCGCCACCGGCA
CTGCGCCGGGTGGAAGTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MSRVRLVIAQCTVDYVGRLTAHLPSARRLLLFKADGSVSVHADDRAYKPLNWMSPPCWLREEAGDAAPVWVVENKAGEQL
RITVEDIEHDSSHDLGVDPGLVKDGVEAHLQALLAEHVQLLGEGYTLVRREYMTAIGPVDLLCRDERGGSVAVEIKRRGE
IDGVEQLTRYLELLNRDSVLAPVRGVFAAQQIKPQARTLATDRGIRCVTLDYDKMRGMDSDEYRLF

Sequences:

>Translated_226_residues
MSRVRLVIAQCTVDYVGRLTAHLPSARRLLLFKADGSVSVHADDRAYKPLNWMSPPCWLREEAGDAAPVWVVENKAGEQL
RITVEDIEHDSSHDLGVDPGLVKDGVEAHLQALLAEHVQLLGEGYTLVRREYMTAIGPVDLLCRDERGGSVAVEIKRRGE
IDGVEQLTRYLELLNRDSVLAPVRGVFAAQQIKPQARTLATDRGIRCVTLDYDKMRGMDSDEYRLF
>Mature_225_residues
SRVRLVIAQCTVDYVGRLTAHLPSARRLLLFKADGSVSVHADDRAYKPLNWMSPPCWLREEAGDAAPVWVVENKAGEQLR
ITVEDIEHDSSHDLGVDPGLVKDGVEAHLQALLAEHVQLLGEGYTLVRREYMTAIGPVDLLCRDERGGSVAVEIKRRGEI
DGVEQLTRYLELLNRDSVLAPVRGVFAAQQIKPQARTLATDRGIRCVTLDYDKMRGMDSDEYRLF

Specific function: Unknown

COG id: COG1637

COG function: function code L; Predicted nuclease of the RecB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0286 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002793 [H]

Pfam domain/function: PF01939 DUF91 [H]

EC number: NA

Molecular weight: Translated: 25292; Mature: 25161

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVRLVIAQCTVDYVGRLTAHLPSARRLLLFKADGSVSVHADDRAYKPLNWMSPPCWLR
CCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCH
EEAGDAAPVWVVENKAGEQLRITVEDIEHDSSHDLGVDPGLVKDGVEAHLQALLAEHVQL
HCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LGEGYTLVRREYMTAIGPVDLLCRDERGGSVAVEIKRRGEIDGVEQLTRYLELLNRDSVL
HHCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHH
APVRGVFAAQQIKPQARTLATDRGIRCVTLDYDKMRGMDSDEYRLF
HHHHHHHHHHHCCCHHHHHHHCCCCEEEEECHHHHCCCCCCCEECC
>Mature Secondary Structure 
SRVRLVIAQCTVDYVGRLTAHLPSARRLLLFKADGSVSVHADDRAYKPLNWMSPPCWLR
CCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCH
EEAGDAAPVWVVENKAGEQLRITVEDIEHDSSHDLGVDPGLVKDGVEAHLQALLAEHVQL
HCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LGEGYTLVRREYMTAIGPVDLLCRDERGGSVAVEIKRRGEIDGVEQLTRYLELLNRDSVL
HHCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHH
APVRGVFAAQQIKPQARTLATDRGIRCVTLDYDKMRGMDSDEYRLF
HHHHHHHHHHHCCCHHHHHHHCCCCEEEEECHHHHCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]