| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408510
Identifier: 41408510
GI number: 41408510
Start: 2707935
End: 2709011
Strand: Reverse
Name: 41408510
Synonym: MAP2412c
Alternate gene names: NA
Gene position: 2709011-2707935 (Counterclockwise)
Preceding gene: 41408511
Following gene: 41408506
Centisome position: 56.09
GC content: 70.1
Gene sequence:
>1077_bases ATGAGTGCTGTGCTGTCGATACCGCGTTACCCCGGTGACGTCACCCCGCAGTGGCTGTCGGCGGCGCTGAGCGGGCGCGG AGCTCCCGTCGAGGTCGCCGAGGTGGACGTGGCCGCGATCGGCACCGGGCAGACCGGGGCCACCTACCGGGTGACGGCCC GCTACGCCACCGATCCCGGTGACCTGCCGCAGACCTTCGTGATCAAACTTCCCGCTCAGGACGACACCGTGCGCGACCGG GTGGTCATCGGCTACCGCAGCGAATGCGCGTTCTACTCCTCGGTGGCCGACCGGGTGCAGGTGCCGACGCCGCGCTGCTT CTACTCCGAGATCACCGAGGACGCAATGGATTTCGCCCTGCTGCTGGCCGATCAGGCGCCGGCGGTGCAGGGCGATCAGC TGTTGGGCTGCGGTGAAACCGAGGCGCGGCTTGCGGTCACCGCGCTGGCCGGTCTGCACGCGCCCAGCTGGTGTGACCCG GTGTGGCTCGATTTCCCGGGCATCGCGTTCGGGCGGCCCGACGAAGCCGGGGCGGGCGGCATGGGGGAGGTGGCGAAGAT GAGCGCCGACATCACGCTGGAGCGGCTGGGCGATCGGATGAGCGCCGAAGACCGCGAAACCTTCGCCGCGGCAATGGGTG TGATCGCGCCGTGGCTGCTGTCCGAGTATGACCGGTTCGCCCTGCTGCACGGCAACTACCGCCTGGACAACCTGCTGTTC GACCCGGACCGAACCAGGGTGAGTGTGGTCGACTGGCAGACGCTCGGGGTCGGCCTTCCGGCCCGCGACCTCGCCTACTT CACCGCGACCAGCCTGGATTCGCCGCTGCGCGCGGCCATCGAGGAAGAGCTTGTCGCCGACTACCACCGCGCGCTGGTGG CCGGTGGGGTCAGCGGCTACAACCTCGAAACCTGTTGGCGCGACTACCGGCTCGGGGTGCTGCAGGCGCCGCTGATCTCC GCGCTGGGGTTCGCGTTCGCCGCGGCCACCGAGCGCGGCGACGACATGGTGCTCACCATGCTGGGCCGCGGCTGCCGGGC GATCCGCGAGCTGGGCACCCTCGAGCTGATCGGCTGA
Upstream 100 bases:
>100_bases ATGGCGGATTCCGGCCGGTTAGCTCACCGCGGTTGACCGCAACTCTTGCGGTATGCCTTACAGTTTGTCAGTCGGATCTG CATCCAGGAGGCGTGCCGCG
Downstream 100 bases:
>100_bases CGCCTCAGAGGTCGCCGGTGAAGTCGGCGCTCAGCCAGCGGTCGGGCCGGATGGTGAACAGCACCTCCTCGACACCCTCC AGGCTTTGCACGAACGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphotransferase Family Protein; Conserved Domain Protein; Protein Kinase-Like Protein
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MSAVLSIPRYPGDVTPQWLSAALSGRGAPVEVAEVDVAAIGTGQTGATYRVTARYATDPGDLPQTFVIKLPAQDDTVRDR VVIGYRSECAFYSSVADRVQVPTPRCFYSEITEDAMDFALLLADQAPAVQGDQLLGCGETEARLAVTALAGLHAPSWCDP VWLDFPGIAFGRPDEAGAGGMGEVAKMSADITLERLGDRMSAEDRETFAAAMGVIAPWLLSEYDRFALLHGNYRLDNLLF DPDRTRVSVVDWQTLGVGLPARDLAYFTATSLDSPLRAAIEEELVADYHRALVAGGVSGYNLETCWRDYRLGVLQAPLIS ALGFAFAAATERGDDMVLTMLGRGCRAIRELGTLELIG
Sequences:
>Translated_358_residues MSAVLSIPRYPGDVTPQWLSAALSGRGAPVEVAEVDVAAIGTGQTGATYRVTARYATDPGDLPQTFVIKLPAQDDTVRDR VVIGYRSECAFYSSVADRVQVPTPRCFYSEITEDAMDFALLLADQAPAVQGDQLLGCGETEARLAVTALAGLHAPSWCDP VWLDFPGIAFGRPDEAGAGGMGEVAKMSADITLERLGDRMSAEDRETFAAAMGVIAPWLLSEYDRFALLHGNYRLDNLLF DPDRTRVSVVDWQTLGVGLPARDLAYFTATSLDSPLRAAIEEELVADYHRALVAGGVSGYNLETCWRDYRLGVLQAPLIS ALGFAFAAATERGDDMVLTMLGRGCRAIRELGTLELIG >Mature_357_residues SAVLSIPRYPGDVTPQWLSAALSGRGAPVEVAEVDVAAIGTGQTGATYRVTARYATDPGDLPQTFVIKLPAQDDTVRDRV VIGYRSECAFYSSVADRVQVPTPRCFYSEITEDAMDFALLLADQAPAVQGDQLLGCGETEARLAVTALAGLHAPSWCDPV WLDFPGIAFGRPDEAGAGGMGEVAKMSADITLERLGDRMSAEDRETFAAAMGVIAPWLLSEYDRFALLHGNYRLDNLLFD PDRTRVSVVDWQTLGVGLPARDLAYFTATSLDSPLRAAIEEELVADYHRALVAGGVSGYNLETCWRDYRLGVLQAPLISA LGFAFAAATERGDDMVLTMLGRGCRAIRELGTLELIG
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38532; Mature: 38401
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVLSIPRYPGDVTPQWLSAALSGRGAPVEVAEVDVAAIGTGQTGATYRVTARYATDPG CCCEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEECCCCC DLPQTFVIKLPAQDDTVRDRVVIGYRSECAFYSSVADRVQVPTPRCFYSEITEDAMDFAL CCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LLADQAPAVQGDQLLGCGETEARLAVTALAGLHAPSWCDPVWLDFPGIAFGRPDEAGAGG HHCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCC MGEVAKMSADITLERLGDRMSAEDRETFAAAMGVIAPWLLSEYDRFALLHGNYRLDNLLF CCHHHHHHHCEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEECCEEE DPDRTRVSVVDWQTLGVGLPARDLAYFTATSLDSPLRAAIEEELVADYHRALVAGGVSGY CCCCCEEEEEEEHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC NLETCWRDYRLGVLQAPLISALGFAFAAATERGDDMVLTMLGRGCRAIRELGTLELIG CHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEECC >Mature Secondary Structure SAVLSIPRYPGDVTPQWLSAALSGRGAPVEVAEVDVAAIGTGQTGATYRVTARYATDPG CCEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEECCCCC DLPQTFVIKLPAQDDTVRDRVVIGYRSECAFYSSVADRVQVPTPRCFYSEITEDAMDFAL CCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LLADQAPAVQGDQLLGCGETEARLAVTALAGLHAPSWCDPVWLDFPGIAFGRPDEAGAGG HHCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCC MGEVAKMSADITLERLGDRMSAEDRETFAAAMGVIAPWLLSEYDRFALLHGNYRLDNLLF CCHHHHHHHCEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEECCEEE DPDRTRVSVVDWQTLGVGLPARDLAYFTATSLDSPLRAAIEEELVADYHRALVAGGVSGY CCCCCEEEEEEEHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC NLETCWRDYRLGVLQAPLISALGFAFAAATERGDDMVLTMLGRGCRAIRELGTLELIG CHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA