| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408384
Identifier: 41408384
GI number: 41408384
Start: 2556033
End: 2556656
Strand: Reverse
Name: 41408384
Synonym: MAP2286c
Alternate gene names: NA
Gene position: 2556656-2556033 (Counterclockwise)
Preceding gene: 41408386
Following gene: 41408383
Centisome position: 52.94
GC content: 67.79
Gene sequence:
>624_bases ATGGCGCAGCAGGCCCCCGCGAAGAACAAAGCCGATTTCTGGTTCGACCCGCTGTGCCCGTGGGCATGGATCACCTCACG CTGGATCCTCGAGGTGGAAAAGGTCCGCGACATCGAGGTGAACTTCCACGTGATGAGCCTGGCGGTGCTCAACGAGAACC GCGAGGGCCTGCCCGACGAATACCGGGAGCGGTTGGCCAAGGCGTTCGGCCCGGTGCGGGTGGCCATCGCCGCCGAGCAG GCGCACGGCGCCAAGGTGCTTGCGCCGCTGTACACGGCGATGGGCACCCGCATCCACAACGAGGGCAACAAGGACCTCAC CGACGTGATCAAGCAGTCGCTGGCCGAGGTGGGCCTGCCGGCCGAGCTGGCCGAGGCCGCCGACACCGACGCCTACGACG ACGCGCTGCGCAAGAGCCACCACGCCGGCATGGACCCGGTCGGCGACGACGTCGGCACCCCCACCATCCACGTCAACGAC GTGGCGTTCTTCGGGCCGGTGCTGTCCCGGATCCCGCGCGGCGAGGAAGCGGGCAAGCTGTGGGACGCCTCGGTGACGTT CGCGTCCTACCCGCACTTCTTCGAACTCAAGCGAACCCGCGACGAGAAGCCCGAATTCGACTAG
Upstream 100 bases:
>100_bases ACTTACGGGGCGGGCAAACCGGGAACAGGATGCAGACGCCTACGGTTGTGCAGATCAGTCTTTCAACTCCACGAGCAACT CCCACACGAGAGGATCCGCC
Downstream 100 bases:
>100_bases CCTGCCGCACACAGCCGCGGGCCCGGCGGCCCGCGGCTGTGTAAGGATTGCGGGCATGCGCGTCTACCTCGGCTCTGACC ACGCCGGATTCGAGCTCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MAQQAPAKNKADFWFDPLCPWAWITSRWILEVEKVRDIEVNFHVMSLAVLNENREGLPDEYRERLAKAFGPVRVAIAAEQ AHGAKVLAPLYTAMGTRIHNEGNKDLTDVIKQSLAEVGLPAELAEAADTDAYDDALRKSHHAGMDPVGDDVGTPTIHVND VAFFGPVLSRIPRGEEAGKLWDASVTFASYPHFFELKRTRDEKPEFD
Sequences:
>Translated_207_residues MAQQAPAKNKADFWFDPLCPWAWITSRWILEVEKVRDIEVNFHVMSLAVLNENREGLPDEYRERLAKAFGPVRVAIAAEQ AHGAKVLAPLYTAMGTRIHNEGNKDLTDVIKQSLAEVGLPAELAEAADTDAYDDALRKSHHAGMDPVGDDVGTPTIHVND VAFFGPVLSRIPRGEEAGKLWDASVTFASYPHFFELKRTRDEKPEFD >Mature_206_residues AQQAPAKNKADFWFDPLCPWAWITSRWILEVEKVRDIEVNFHVMSLAVLNENREGLPDEYRERLAKAFGPVRVAIAAEQA HGAKVLAPLYTAMGTRIHNEGNKDLTDVIKQSLAEVGLPAELAEAADTDAYDDALRKSHHAGMDPVGDDVGTPTIHVNDV AFFGPVLSRIPRGEEAGKLWDASVTFASYPHFFELKRTRDEKPEFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: NA
Molecular weight: Translated: 23096; Mature: 22965
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQQAPAKNKADFWFDPLCPWAWITSRWILEVEKVRDIEVNFHVMSLAVLNENREGLPDE CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEECCCCCCCCHH YRERLAKAFGPVRVAIAAEQAHGAKVLAPLYTAMGTRIHNEGNKDLTDVIKQSLAEVGLP HHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC AELAEAADTDAYDDALRKSHHAGMDPVGDDVGTPTIHVNDVAFFGPVLSRIPRGEEAGKL HHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCE WDASVTFASYPHFFELKRTRDEKPEFD ECCEEEHHCCCCHHHHHHCCCCCCCCC >Mature Secondary Structure AQQAPAKNKADFWFDPLCPWAWITSRWILEVEKVRDIEVNFHVMSLAVLNENREGLPDE CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEECCCCCCCCHH YRERLAKAFGPVRVAIAAEQAHGAKVLAPLYTAMGTRIHNEGNKDLTDVIKQSLAEVGLP HHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC AELAEAADTDAYDDALRKSHHAGMDPVGDDVGTPTIHVNDVAFFGPVLSRIPRGEEAGKL HHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCE WDASVTFASYPHFFELKRTRDEKPEFD ECCEEEHHCCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]