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The map label for this gene is frlR [H]

Identifier: 41408350

GI number: 41408350

Start: 2516251

End: 2517024

Strand: Reverse

Name: frlR [H]

Synonym: MAP2252c

Alternate gene names: 41408350

Gene position: 2517024-2516251 (Counterclockwise)

Preceding gene: 41408356

Following gene: 41408348

Centisome position: 52.11

GC content: 71.45

Gene sequence:

>774_bases
GTGACGGCGGCCGCCGGTGTGCCGTTGCACCGCCAGCTGTTTCTGGTGTTGCACGACGAAATCGACCGCGGCGTCATCGC
CCCGGGTGAGGCGTTGCCCACCGAGCAGACGCTGTGCGATCAGTTCGGGGTCTCTCGCATCACGGTGCGACGGGCGCTGG
CGGACCTGGCCGCGCAGGGCTACATCGAGCGCCGGCAGGGCGTGGGTTCCTTTGTACGCCAGCATGATCCGGCCGATGTG
CCGACAGGGCGCTCATACCTGCAGGGACTGCGGCAGACCCAGTTCGAAACCGAGGCCGAAGTCGTCGAGCTGGGGGTGCG
GTCCGCGCCCCGGGCGGTCGCCGAGGCCCTGGGGCGCTCCGGCGAGTTGTTACACATCGTGCGGGTGCGCCGGCAGCGCC
GCACCCGCGAGCCGCTGATGGTGACCAACGCCTGGCTGCCGCCGGAGTTGGCCCCGGTGCTGACCGAGCGCGCGCTGCGG
CGCGCGCCGCTGTATGAGCTGCTGTCGGCGAACGGGGTCGCCGTGGATCGGGTGCGGCACGAGATCACGGCCGAAATCGC
CGGTCCGCGCAACGCGCAACTGCTCGACGTGCCGATCGGTGCCGCCCTGCTGAGGGTCAACCGGCTCGTCTACGTCGGCG
ACCGTCCGCACCACCACGTCTCGGCGCTGTTGTCGCCGAGCCGAAGTCGGGTGCTGCTCAGCCAGTCCGCCGACGACATG
GAGACCGGCGACGGCCTGCGGATCGCCCACGACGTCGGCGGCCCGCGCGGCTAA

Upstream 100 bases:

>100_bases
GTGATTTGTTATATGTTTATAACAACAAATCGAATCCCGCAAGCAAGGTGGTGTGGAAGCATTGGGCATCGTGCAGCAGC
GCAGCGACAAGGCCGGCCCG

Downstream 100 bases:

>100_bases
GACTTACCACGCAAGGCCCTTTCGATTTCCTCGGCCCGCGGCGCGCAATCCCCGGCCCCGGGCACCAGGGTGGCCAGCGC
ACCCGCGGCGCAGGCCCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MTAAAGVPLHRQLFLVLHDEIDRGVIAPGEALPTEQTLCDQFGVSRITVRRALADLAAQGYIERRQGVGSFVRQHDPADV
PTGRSYLQGLRQTQFETEAEVVELGVRSAPRAVAEALGRSGELLHIVRVRRQRRTREPLMVTNAWLPPELAPVLTERALR
RAPLYELLSANGVAVDRVRHEITAEIAGPRNAQLLDVPIGAALLRVNRLVYVGDRPHHHVSALLSPSRSRVLLSQSADDM
ETGDGLRIAHDVGGPRG

Sequences:

>Translated_257_residues
MTAAAGVPLHRQLFLVLHDEIDRGVIAPGEALPTEQTLCDQFGVSRITVRRALADLAAQGYIERRQGVGSFVRQHDPADV
PTGRSYLQGLRQTQFETEAEVVELGVRSAPRAVAEALGRSGELLHIVRVRRQRRTREPLMVTNAWLPPELAPVLTERALR
RAPLYELLSANGVAVDRVRHEITAEIAGPRNAQLLDVPIGAALLRVNRLVYVGDRPHHHVSALLSPSRSRVLLSQSADDM
ETGDGLRIAHDVGGPRG
>Mature_256_residues
TAAAGVPLHRQLFLVLHDEIDRGVIAPGEALPTEQTLCDQFGVSRITVRRALADLAAQGYIERRQGVGSFVRQHDPADVP
TGRSYLQGLRQTQFETEAEVVELGVRSAPRAVAEALGRSGELLHIVRVRRQRRTREPLMVTNAWLPPELAPVLTERALRR
APLYELLSANGVAVDRVRHEITAEIAGPRNAQLLDVPIGAALLRVNRLVYVGDRPHHHVSALLSPSRSRVLLSQSADDME
TGDGLRIAHDVGGPRG

Specific function: May regulate the transcription of the frlABCD operon [H]

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082252, Length=214, Percent_Identity=29.4392523364486, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1786950, Length=205, Percent_Identity=30.2439024390244, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 28149; Mature: 28017

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAAGVPLHRQLFLVLHDEIDRGVIAPGEALPTEQTLCDQFGVSRITVRRALADLAAQG
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH
YIERRQGVGSFVRQHDPADVPTGRSYLQGLRQTQFETEAEVVELGVRSAPRAVAEALGRS
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
GELLHIVRVRRQRRTREPLMVTNAWLPPELAPVLTERALRRAPLYELLSANGVAVDRVRH
CCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHH
EITAEIAGPRNAQLLDVPIGAALLRVNRLVYVGDRPHHHVSALLSPSRSRVLLSQSADDM
HHHHHHCCCCCCEEEECCHHHHHHHHCCEEEECCCCCHHHHHHHCCCCCEEEECCCCCCC
ETGDGLRIAHDVGGPRG
CCCCCEEEEECCCCCCC
>Mature Secondary Structure 
TAAAGVPLHRQLFLVLHDEIDRGVIAPGEALPTEQTLCDQFGVSRITVRRALADLAAQG
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH
YIERRQGVGSFVRQHDPADVPTGRSYLQGLRQTQFETEAEVVELGVRSAPRAVAEALGRS
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
GELLHIVRVRRQRRTREPLMVTNAWLPPELAPVLTERALRRAPLYELLSANGVAVDRVRH
CCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHH
EITAEIAGPRNAQLLDVPIGAALLRVNRLVYVGDRPHHHVSALLSPSRSRVLLSQSADDM
HHHHHHCCCCCCEEEECCHHHHHHHHCCEEEECCCCCHHHHHHHCCCCCEEEECCCCCCC
ETGDGLRIAHDVGGPRG
CCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]