| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408335
Identifier: 41408335
GI number: 41408335
Start: 2499820
End: 2500914
Strand: Direct
Name: 41408335
Synonym: MAP2237
Alternate gene names: NA
Gene position: 2499820-2500914 (Clockwise)
Preceding gene: 41408334
Following gene: 41408336
Centisome position: 51.76
GC content: 67.76
Gene sequence:
>1095_bases ATGAACATAATGAGGCAATCGCACGGCAAAGGAGCCCCGATGAGCAAGCCAAGCACCACCCGTCCGCTGCGGGTGATCCA GTGGACCACCGGCAACATCGGGCGGCGTTCGCTGCACGCCATCATCGGCCGGCCCGACATGGAACTGGTCGGGGTCTATG CGCACGGCGCCGAGAAGGTCGGCGTCGACGCCGCCGAGCTGGCGGGCTGGCCGGAGCCGACCGGGGTGGCGGCCACCAAC GACATCGACGCGCTGCTGTCCCTGGGCGCCGACGCGTGTTGCTATAACCCGTTGTGGCCCAACGTCGATGAGCTGGTGCG GCTGCTGGAGTCGGGCGTCAACGTGTGCACCAGCGCGGCCTGGATCACCGGCGGCAAGCAGACGCCCGAAGACCGTCGGC GCATCGAAGAGGCCTGCCGGAAGGGCAATTCGACGATCTTCGGCAGCGGCGCACATCCGGGCATGACCAACATGGTCGGC ATGGTGCTGTCCGCGTCCTGCGAGCGGGTCGACGAGATCCGGATCACCGAGTCGGTGGACTGCTCCACCTACGAATCGGC GGAAACCCAGACGGCCATGGGGTTTTCGCAAGACCCCGACACCCCGGGCCTGGCGGAAAGCGTGCGGCGGGAAAGCGAGG TGTTCGCCGAGTCGGCGGCGATGATGGCCGACGCGATCGGGGCGAAGCTGGACAAGATGACCTTCGACGTCACCTTCACC GCGGCCACCGGCGACTCCGACCTGGGCTTCATGAAGATTCCGGCCGGCACGGTCGGCAGCGTCTACGGCTATCACCGCGG CTGGGTCGGCGAGCGCAACGTCGTCAGCGTCGGGTTCAACTGGACCATGGGCGATCACGTGGTGCCGCCCAAACCGCTCG AGCACGGCCACGTCATCCAGGTGTTCGGGCTGCCCAACATGCGCACCGTGCTGCACTGCCTGCCGCCCAAGGACTGGACC GAACCCGGATTCATGGGGCTCGGCATGATCTACACCGCGATGCCGGTCACCAACGCGGTGCCGGCGGTGGTGGCGGCCAG ACCGGGGATCGTGACGCTGGCGGATCTACCGCCGGTCACCGGCCGGCTGGGCTGA
Upstream 100 bases:
>100_bases CAGACCTCAGGTCGCCGTCCTGCTGGCCGCGGCCGGCTGTGTGTTCCTCACGGTCGGCGTGACCGGACTTTGAGGCCCGG CGCGCGGGCGCGGAGCCGGG
Downstream 100 bases:
>100_bases CGCCTATGCCGTTCGCCACACCGGACGGCCCCCGGGAGGAACGCTTGCGTGCACTAAGGTTAGGATGCCTAGCTGAGCAA ATGTTCCGTTGACATTGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Dihydrodipicolinate Reductase N-Terminus Domain Protein; Dihydrodipicolinate Reductase-Like Protein; Dihydropicolinate Reductase
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MNIMRQSHGKGAPMSKPSTTRPLRVIQWTTGNIGRRSLHAIIGRPDMELVGVYAHGAEKVGVDAAELAGWPEPTGVAATN DIDALLSLGADACCYNPLWPNVDELVRLLESGVNVCTSAAWITGGKQTPEDRRRIEEACRKGNSTIFGSGAHPGMTNMVG MVLSASCERVDEIRITESVDCSTYESAETQTAMGFSQDPDTPGLAESVRRESEVFAESAAMMADAIGAKLDKMTFDVTFT AATGDSDLGFMKIPAGTVGSVYGYHRGWVGERNVVSVGFNWTMGDHVVPPKPLEHGHVIQVFGLPNMRTVLHCLPPKDWT EPGFMGLGMIYTAMPVTNAVPAVVAARPGIVTLADLPPVTGRLG
Sequences:
>Translated_364_residues MNIMRQSHGKGAPMSKPSTTRPLRVIQWTTGNIGRRSLHAIIGRPDMELVGVYAHGAEKVGVDAAELAGWPEPTGVAATN DIDALLSLGADACCYNPLWPNVDELVRLLESGVNVCTSAAWITGGKQTPEDRRRIEEACRKGNSTIFGSGAHPGMTNMVG MVLSASCERVDEIRITESVDCSTYESAETQTAMGFSQDPDTPGLAESVRRESEVFAESAAMMADAIGAKLDKMTFDVTFT AATGDSDLGFMKIPAGTVGSVYGYHRGWVGERNVVSVGFNWTMGDHVVPPKPLEHGHVIQVFGLPNMRTVLHCLPPKDWT EPGFMGLGMIYTAMPVTNAVPAVVAARPGIVTLADLPPVTGRLG >Mature_364_residues MNIMRQSHGKGAPMSKPSTTRPLRVIQWTTGNIGRRSLHAIIGRPDMELVGVYAHGAEKVGVDAAELAGWPEPTGVAATN DIDALLSLGADACCYNPLWPNVDELVRLLESGVNVCTSAAWITGGKQTPEDRRRIEEACRKGNSTIFGSGAHPGMTNMVG MVLSASCERVDEIRITESVDCSTYESAETQTAMGFSQDPDTPGLAESVRRESEVFAESAAMMADAIGAKLDKMTFDVTFT AATGDSDLGFMKIPAGTVGSVYGYHRGWVGERNVVSVGFNWTMGDHVVPPKPLEHGHVIQVFGLPNMRTVLHCLPPKDWT EPGFMGLGMIYTAMPVTNAVPAVVAARPGIVTLADLPPVTGRLG
Specific function: Unknown
COG id: COG3804
COG function: function code S; Uncharacterized conserved protein related to dihydrodipicolinate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38838; Mature: 38838
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIMRQSHGKGAPMSKPSTTRPLRVIQWTTGNIGRRSLHAIIGRPDMELVGVYAHGAEKV CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEEECCCHHH GVDAAELAGWPEPTGVAATNDIDALLSLGADACCYNPLWPNVDELVRLLESGVNVCTSAA CCCHHHHCCCCCCCCCCCCCHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHH WITGGKQTPEDRRRIEEACRKGNSTIFGSGAHPGMTNMVGMVLSASCERVDEIRITESVD EECCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEECCCC CSTYESAETQTAMGFSQDPDTPGLAESVRRESEVFAESAAMMADAIGAKLDKMTFDVTFT CCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEE AATGDSDLGFMKIPAGTVGSVYGYHRGWVGERNVVSVGFNWTMGDHVVPPKPLEHGHVIQ EECCCCCCCEEEECCCCHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEE VFGLPNMRTVLHCLPPKDWTEPGFMGLGMIYTAMPVTNAVPAVVAARPGIVTLADLPPVT EECCCCHHHHHEECCCCCCCCCCCHHHHHHHHHHCHHCCCCHHHHCCCCEEEEECCCCCC GRLG CCCC >Mature Secondary Structure MNIMRQSHGKGAPMSKPSTTRPLRVIQWTTGNIGRRSLHAIIGRPDMELVGVYAHGAEKV CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEEECCCHHH GVDAAELAGWPEPTGVAATNDIDALLSLGADACCYNPLWPNVDELVRLLESGVNVCTSAA CCCHHHHCCCCCCCCCCCCCHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHH WITGGKQTPEDRRRIEEACRKGNSTIFGSGAHPGMTNMVGMVLSASCERVDEIRITESVD EECCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEECCCC CSTYESAETQTAMGFSQDPDTPGLAESVRRESEVFAESAAMMADAIGAKLDKMTFDVTFT CCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEE AATGDSDLGFMKIPAGTVGSVYGYHRGWVGERNVVSVGFNWTMGDHVVPPKPLEHGHVIQ EECCCCCCCEEEECCCCHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEE VFGLPNMRTVLHCLPPKDWTEPGFMGLGMIYTAMPVTNAVPAVVAARPGIVTLADLPPVT EECCCCHHHHHEECCCCCCCCCCCHHHHHHHHHHCHHCCCCHHHHCCCCEEEEECCCCCC GRLG CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA