| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408319
Identifier: 41408319
GI number: 41408319
Start: 2468703
End: 2470235
Strand: Reverse
Name: 41408319
Synonym: MAP2221c
Alternate gene names: NA
Gene position: 2470235-2468703 (Counterclockwise)
Preceding gene: 41408320
Following gene: 41408317
Centisome position: 51.15
GC content: 71.49
Gene sequence:
>1533_bases ATGTGGCGGCTGCGGGTGGTGCACACCACGGGGTACGCCTACCAGTCGCCGGTGACGGCGTCTTACAACGAAGCCCGGCT GACCCCGCGGTCGAACAATCGGCAGAACGTCATCCTCAACCGCGTCGAGACCATCCCGGCGACCCGGTCCTACCGCTACA TCGACTACTGGGGGACCGCGGTCACAGCGTTCGACCTGCACGCGCCGCACACCGACCTCACGGTGATGTCCTCGTCGGTC GTAGAGACCGAGCGGGCCGAACGGCCGGCGACCGAGCTGGGCTGGGGTGATCTGCACTCGGAGGCGGTGATCGACCGCTT TGACGAGCTGCTGCGCCCCACCGGGCACGTCCCCGCCAGCAAGCGGGTGGCGTCGGTCGCCAAGAAGATCGCCAAATCGC ATGACCCGGCCGAAGCCGTTGTCGCCGTGGGTGATTGGGTGCGCGGCGAGCTCGAATACCTGCCCGGCACCACCAGCGTG CACTCGTCCGGGCTGGACGCGCTGAAGGAGGGCAGGGGAGTCTGCCAGGACTTCGTGCACCTGTCGTTGATGTTGTTGCG CAGCATGGGAATTCCGTCGCACTACGTGTCGGGTTACTTGCACCCCAAACGCGACGCCGTGGTCGGCGACACCGTGGACG GGCGCAGTCACGCCTGGATCGAGGCGTGGACGGGCGCGTGGTGGAGCTACGACCCCACCAACGACGCCGAGATCACCGAG CAGTACGTCGGGGTGGGCGCGGGCCGCGACTACGCCGATGTCTCCCCGCTCAAGGGCATCTATTCGGGGGAGGGCGCCAC CGACCTCGACGTGATCGTCGAGGTGACCCGCTCGCCTGACCAACGGAGGAGCCGGCGGCGATCAGGAGAAACGCATGGAC GACACCGCGCGCCGCGCCTCCGGGTTGCCGCTGCTGTCGCTGCTCTGCGTCGGCCTGCTGGCCGGCGGGCTCGCCGTCGG GGTCGGGATGGGCGGCGTCATGCCGCTGCCGTACGGCCCGGTGGCCGCGGTGGCGGCCTATGTTCGCGCCCAGCCGGATG CCGTGCGGGTGATCGCCGTCGCGACGTTCGCGTCGTCGGTCCCGCTGGCGCTCTACGCGGCGACGGCCGCCGCCCGGTTG CGCCGCCTCGGGGCCGGCCCGACGACCGCCGCGATCACGCTCACCGGCGGAACCCTGGCGGCCGGATTGCTCGCCCTGGC CGGATTGCTCGGCTGGACGCTGTCCCGGCCGGCGGTCACCGCGGACACGGCGGTGGTGGCGGCGCTGTACCTGCTGGTGT TTCTCACCGGCGGGCCGGGGCACATCGTGGCGCTGGGCGTGTTGGTCGCCGCGATGGCGGTGCCCGGCCTGACCCGGGGG GTGCTGCCCCGGCCCGTCGCGCGGGCCGGTCTGGCCACGGCCGCACTCGCCGGGTCGGCGACCGCGGTGCTGATCTGGCC CGCGCTGGGCGTGATCTTGCCGGTCGCGCGGGTGGCGGCGCTGGCCTGGCTGGTGGTCGCGGGAATTGCTTTGCGGGACA AGGGTTATGGTGA
Upstream 100 bases:
>100_bases CAGACGCGTTGGCGCTGCAGTACTTTCACGTCACCCCGTGGGTGGCCTGGTCGGACGCCAGCCAGCGCGCCCGGCTGGTC AGCCGCAAAGGGGACGGCTG
Downstream 100 bases:
>100_bases CCGGGGCGGTCGAGCTCAGGAGGGCGCGTCGACCTGAACCCGGTGCAGGTCGTCGCCGAGTTCGACGCGTCCGGCGAACT CGCGGGCCGCCAGCGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MWRLRVVHTTGYAYQSPVTASYNEARLTPRSNNRQNVILNRVETIPATRSYRYIDYWGTAVTAFDLHAPHTDLTVMSSSV VETERAERPATELGWGDLHSEAVIDRFDELLRPTGHVPASKRVASVAKKIAKSHDPAEAVVAVGDWVRGELEYLPGTTSV HSSGLDALKEGRGVCQDFVHLSLMLLRSMGIPSHYVSGYLHPKRDAVVGDTVDGRSHAWIEAWTGAWWSYDPTNDAEITE QYVGVGAGRDYADVSPLKGIYSGEGATDLDVIVEVTRSPDQRRSRRRSGETHGRHRAPRLRVAAAVAALRRPAGRRARRR GRDGRRHAAAVRPGGRGGGLCSRPAGCRAGDRRRDVRVVGPAGALRGDGRRPVAPPRGRPDDRRDHAHRRNPGGRIARPG RIARLDAVPAGGHRGHGGGGGAVPAGVSHRRAGAHRGAGRVGRRDGGARPDPGGAAPARRAGRSGHGRTRRVGDRGADLA RAGRDLAGRAGGGAGLAGGRGNCFAGQGLW
Sequences:
>Translated_510_residues MWRLRVVHTTGYAYQSPVTASYNEARLTPRSNNRQNVILNRVETIPATRSYRYIDYWGTAVTAFDLHAPHTDLTVMSSSV VETERAERPATELGWGDLHSEAVIDRFDELLRPTGHVPASKRVASVAKKIAKSHDPAEAVVAVGDWVRGELEYLPGTTSV HSSGLDALKEGRGVCQDFVHLSLMLLRSMGIPSHYVSGYLHPKRDAVVGDTVDGRSHAWIEAWTGAWWSYDPTNDAEITE QYVGVGAGRDYADVSPLKGIYSGEGATDLDVIVEVTRSPDQRRSRRRSGETHGRHRAPRLRVAAAVAALRRPAGRRARRR GRDGRRHAAAVRPGGRGGGLCSRPAGCRAGDRRRDVRVVGPAGALRGDGRRPVAPPRGRPDDRRDHAHRRNPGGRIARPG RIARLDAVPAGGHRGHGGGGGAVPAGVSHRRAGAHRGAGRVGRRDGGARPDPGGAAPARRAGRSGHGRTRRVGDRGADLA RAGRDLAGRAGGGAGLAGGRGNCFAGQGLW >Mature_510_residues MWRLRVVHTTGYAYQSPVTASYNEARLTPRSNNRQNVILNRVETIPATRSYRYIDYWGTAVTAFDLHAPHTDLTVMSSSV VETERAERPATELGWGDLHSEAVIDRFDELLRPTGHVPASKRVASVAKKIAKSHDPAEAVVAVGDWVRGELEYLPGTTSV HSSGLDALKEGRGVCQDFVHLSLMLLRSMGIPSHYVSGYLHPKRDAVVGDTVDGRSHAWIEAWTGAWWSYDPTNDAEITE QYVGVGAGRDYADVSPLKGIYSGEGATDLDVIVEVTRSPDQRRSRRRSGETHGRHRAPRLRVAAAVAALRRPAGRRARRR GRDGRRHAAAVRPGGRGGGLCSRPAGCRAGDRRRDVRVVGPAGALRGDGRRPVAPPRGRPDDRRDHAHRRNPGGRIARPG RIARLDAVPAGGHRGHGGGGGAVPAGVSHRRAGAHRGAGRVGRRDGGARPDPGGAAPARRAGRSGHGRTRRVGDRGADLA RAGRDLAGRAGGGAGLAGGRGNCFAGQGLW
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv2569c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013589 - InterPro: IPR002931 [H]
Pfam domain/function: PF08379 Bact_transglu_N; PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 54641; Mature: 54641
Theoretical pI: Translated: 11.71; Mature: 11.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWRLRVVHTTGYAYQSPVTASYNEARLTPRSNNRQNVILNRVETIPATRSYRYIDYWGTA CCEEEEEEECCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCE VTAFDLHAPHTDLTVMSSSVVETERAERPATELGWGDLHSEAVIDRFDELLRPTGHVPAS EEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCHH KRVASVAKKIAKSHDPAEAVVAVGDWVRGELEYLPGTTSVHSSGLDALKEGRGVCQDFVH HHHHHHHHHHHHCCCCHHHHEEHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LSLMLLRSMGIPSHYVSGYLHPKRDAVVGDTVDGRSHAWIEAWTGAWWSYDPTNDAEITE HHHHHHHHCCCCHHHHHCCCCCCCCCEECCCCCCCCCEEEEECCCCCCCCCCCCCHHHHH QYVGVGAGRDYADVSPLKGIYSGEGATDLDVIVEVTRSPDQRRSRRRSGETHGRHRAPRL HHHCCCCCCCCCCCCCCCCHHCCCCCCCHHHHEEECCCCHHHHHHHHCCCCCCCCCCCHH RVAAAVAALRRPAGRRARRRGRDGRRHAAAVRPGGRGGGLCSRPAGCRAGDRRRDVRVVG HHHHHHHHHHCCHHHHHHHCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEC PAGALRGDGRRPVAPPRGRPDDRRDHAHRRNPGGRIARPGRIARLDAVPAGGHRGHGGGG CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC GAVPAGVSHRRAGAHRGAGRVGRRDGGARPDPGGAAPARRAGRSGHGRTRRVGDRGADLA CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHH RAGRDLAGRAGGGAGLAGGRGNCFAGQGLW HHCHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MWRLRVVHTTGYAYQSPVTASYNEARLTPRSNNRQNVILNRVETIPATRSYRYIDYWGTA CCEEEEEEECCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCE VTAFDLHAPHTDLTVMSSSVVETERAERPATELGWGDLHSEAVIDRFDELLRPTGHVPAS EEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCHH KRVASVAKKIAKSHDPAEAVVAVGDWVRGELEYLPGTTSVHSSGLDALKEGRGVCQDFVH HHHHHHHHHHHHCCCCHHHHEEHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LSLMLLRSMGIPSHYVSGYLHPKRDAVVGDTVDGRSHAWIEAWTGAWWSYDPTNDAEITE HHHHHHHHCCCCHHHHHCCCCCCCCCEECCCCCCCCCEEEEECCCCCCCCCCCCCHHHHH QYVGVGAGRDYADVSPLKGIYSGEGATDLDVIVEVTRSPDQRRSRRRSGETHGRHRAPRL HHHCCCCCCCCCCCCCCCCHHCCCCCCCHHHHEEECCCCHHHHHHHHCCCCCCCCCCCHH RVAAAVAALRRPAGRRARRRGRDGRRHAAAVRPGGRGGGLCSRPAGCRAGDRRRDVRVVG HHHHHHHHHHCCHHHHHHHCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEC PAGALRGDGRRPVAPPRGRPDDRRDHAHRRNPGGRIARPGRIARLDAVPAGGHRGHGGGG CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC GAVPAGVSHRRAGAHRGAGRVGRRDGGARPDPGGAAPARRAGRSGHGRTRRVGDRGADLA CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHH RAGRDLAGRAGGGAGLAGGRGNCFAGQGLW HHCHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]