| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408288
Identifier: 41408288
GI number: 41408288
Start: 2432688
End: 2433713
Strand: Direct
Name: 41408288
Synonym: MAP2190
Alternate gene names: NA
Gene position: 2432688-2433713 (Clockwise)
Preceding gene: 41408287
Following gene: 41408289
Centisome position: 50.37
GC content: 65.89
Gene sequence:
>1026_bases ATGACCGGCACCGGCCGCATCATGGTGAAGTTCGGCGTCTTCGCCGCCGTGATGCTGATGCTCACGACCTCCCTCTTCTT CATCTTCGGCCAATTCCGCAACGGCCCCACCCACAGTTACTCAGCGGTCTTCATCGACGCCTCGCAGCTGAAGACCGGAG ATTCGGTGCGGGTAGCCGGAATTCGGGTCGGCACGGTCAACGGCATTGCGCTGCAGCCGGACAACAAGGTAGTCGTGGAC TTCGACGCCGACGACGACGTCGCGCTCACCACCGGCACCCGGGCGGCCGTGCGATATCTCAACCTGGTGGGCGATCGCTA CCTCGAACTCATCATCGGCCCCGGCTCCATGCGGGTGCTGCCGGAGGGGTCGCAGATATCGATCGACCACACCATGCCCT CCCTGGATCTTGACCTGCTGCTCGGCGGGCTGAAACCCGTTATCCAGGGCCTGAATCCGCAGGACGTCAACGCTCTGGCC GGCGCGCTACTACAGGTGTTCCAGGGACAGGGCCAAACGCTGCAGTCCCTGCTGGCGAAAACGTCGTCCTTCTCCAACGA CGTCGCCGGCAAGAACAAGGCCATCGAAACCCTGATCGACAACCTCAACACCGTCGTGCGGACCCTGTCGGACCAAGGGA GCCAGTTCTCCGGCGCGATCGAACGCCTGCAGCGCCTCGTCACCGACCTCGCGCACGACCGCGATCCGATCGGGGACGCG ATCCAGGCCCTGGCCACCGGCACCGCCTCGGTGACCGACCTGCTCAGCGCCGCGCGCCCACCGCTGTCCGGAACGGTCGA CCAGCTGAACCGGCTGGCCCCCCTGCTCGAGCACGGCAAGGGGCGCCTCGACGACGCACTGCAGCGGGCGCCCAACAACT TCCGCAAGCTCGCCCGCACCGGCGCCTACGGCAGCTTCGTCAACTACTACATCTGTGGGCTGACGTTCCGCGTCACCGAT CTGCAGGGCCGCACGGCGGTCTACCCCTGGCTAAAGCAAACCGAGGGAAGGTGCGCGGAGCCCTGA
Upstream 100 bases:
>100_bases GACAGCAGGGCATCCTGTTGAACTCCGACGGGCTCAAGCAGTTCCTCTATGGCCCCCTCGACGGACCGCCGCGCAATACC GCACAGATCGGGCAACCGGG
Downstream 100 bases:
>100_bases TGCTGAAATACCGTGGCGCAAACCTCATTCGACCGGGCTTCATCGGGACGGTGCTGATCCTGCTCGTCGTCGCCGTCGGG TTGGCACCGGACCGGCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family B; Mammalian Cell Entry Related Domain Protein; MCE Family Protein; Mce-Related Protein; MCE-Family Protein; Mce Family B; Mce Family Protein Mce5B; MCE-Family; Mammalian Cell Entry-Like Domain-Containing Protein; Mce Family Lipob; Virulence Factor MCE-Like Protein; Mce Family C
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MTGTGRIMVKFGVFAAVMLMLTTSLFFIFGQFRNGPTHSYSAVFIDASQLKTGDSVRVAGIRVGTVNGIALQPDNKVVVD FDADDDVALTTGTRAAVRYLNLVGDRYLELIIGPGSMRVLPEGSQISIDHTMPSLDLDLLLGGLKPVIQGLNPQDVNALA GALLQVFQGQGQTLQSLLAKTSSFSNDVAGKNKAIETLIDNLNTVVRTLSDQGSQFSGAIERLQRLVTDLAHDRDPIGDA IQALATGTASVTDLLSAARPPLSGTVDQLNRLAPLLEHGKGRLDDALQRAPNNFRKLARTGAYGSFVNYYICGLTFRVTD LQGRTAVYPWLKQTEGRCAEP
Sequences:
>Translated_341_residues MTGTGRIMVKFGVFAAVMLMLTTSLFFIFGQFRNGPTHSYSAVFIDASQLKTGDSVRVAGIRVGTVNGIALQPDNKVVVD FDADDDVALTTGTRAAVRYLNLVGDRYLELIIGPGSMRVLPEGSQISIDHTMPSLDLDLLLGGLKPVIQGLNPQDVNALA GALLQVFQGQGQTLQSLLAKTSSFSNDVAGKNKAIETLIDNLNTVVRTLSDQGSQFSGAIERLQRLVTDLAHDRDPIGDA IQALATGTASVTDLLSAARPPLSGTVDQLNRLAPLLEHGKGRLDDALQRAPNNFRKLARTGAYGSFVNYYICGLTFRVTD LQGRTAVYPWLKQTEGRCAEP >Mature_340_residues TGTGRIMVKFGVFAAVMLMLTTSLFFIFGQFRNGPTHSYSAVFIDASQLKTGDSVRVAGIRVGTVNGIALQPDNKVVVDF DADDDVALTTGTRAAVRYLNLVGDRYLELIIGPGSMRVLPEGSQISIDHTMPSLDLDLLLGGLKPVIQGLNPQDVNALAG ALLQVFQGQGQTLQSLLAKTSSFSNDVAGKNKAIETLIDNLNTVVRTLSDQGSQFSGAIERLQRLVTDLAHDRDPIGDAI QALATGTASVTDLLSAARPPLSGTVDQLNRLAPLLEHGKGRLDDALQRAPNNFRKLARTGAYGSFVNYYICGLTFRVTDL QGRTAVYPWLKQTEGRCAEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36606; Mature: 36475
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGTGRIMVKFGVFAAVMLMLTTSLFFIFGQFRNGPTHSYSAVFIDASQLKTGDSVRVAG CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHCCCCCCEEEEE IRVGTVNGIALQPDNKVVVDFDADDDVALTTGTRAAVRYLNLVGDRYLELIIGPGSMRVL EEEEECCCEEECCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHEEEEEECCCCEEEE PEGSQISIDHTMPSLDLDLLLGGLKPVIQGLNPQDVNALAGALLQVFQGQGQTLQSLLAK CCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH TSSFSNDVAGKNKAIETLIDNLNTVVRTLSDQGSQFSGAIERLQRLVTDLAHDRDPIGDA HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHH IQALATGTASVTDLLSAARPPLSGTVDQLNRLAPLLEHGKGRLDDALQRAPNNFRKLART HHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHH GAYGSFVNYYICGLTFRVTDLQGRTAVYPWLKQTEGRCAEP CCCHHHHHHHHHCEEEEEECCCCCEEECCHHHCCCCCCCCC >Mature Secondary Structure TGTGRIMVKFGVFAAVMLMLTTSLFFIFGQFRNGPTHSYSAVFIDASQLKTGDSVRVAG CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHCCCCCCEEEEE IRVGTVNGIALQPDNKVVVDFDADDDVALTTGTRAAVRYLNLVGDRYLELIIGPGSMRVL EEEEECCCEEECCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHEEEEEECCCCEEEE PEGSQISIDHTMPSLDLDLLLGGLKPVIQGLNPQDVNALAGALLQVFQGQGQTLQSLLAK CCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH TSSFSNDVAGKNKAIETLIDNLNTVVRTLSDQGSQFSGAIERLQRLVTDLAHDRDPIGDA HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHH IQALATGTASVTDLLSAARPPLSGTVDQLNRLAPLLEHGKGRLDDALQRAPNNFRKLART HHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHH GAYGSFVNYYICGLTFRVTDLQGRTAVYPWLKQTEGRCAEP CCCHHHHHHHHHCEEEEEECCCCCEEECCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA