| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41408256
Identifier: 41408256
GI number: 41408256
Start: 2390352
End: 2390933
Strand: Direct
Name: 41408256
Synonym: MAP2158
Alternate gene names: NA
Gene position: 2390352-2390933 (Clockwise)
Preceding gene: 41408255
Following gene: 41408262
Centisome position: 49.49
GC content: 59.79
Gene sequence:
>582_bases ATGGATCAGGACGACCTACCCAGAACGGCGCGCGTCTCGATTGTGGCCCCCTCGCCGGAAGGTGAACTTGCCGAAGTTGC CCTTCTCTTTACCAACATTGTTCGGCGCGACACGGCCGCTTTCCGCGAAGAACTTCAGAACCTTGTGAACTCGCTGGCCG AGACATCGGAGACCAAGCCCGTCATCACCGAGTCGCAGACTCCCTACCCCGGCGGCGGCCTCGCTCAATACGGGATCGCC TTCGCGGTGGGGTTGCCCACTGCCCTTGCGTACAACGTCATCTATGACGCGTTGAAAAAGCTGTCGCATCGGTTCTCGTG GACCGCCGGGTCACCGCCCCAGGAACGATTCCTGATGGAAAATGCAAATCCTTTGGCGCTGGGAGCAATCGAGCAGGGGT TCGGTGTGGCAAGGGATGACTTGAGGCCCGTCGTCGTGGATGTTCAGGGACTCCGCGCCCACGTGGTCTACCACGCGAAA GACGGATCGATGTTCACCGTGGAGATGGAAAACACCGGCCAATTTGCAATCACAAGTGTCAGGAAGAACTGGCCCAACGC CGGGTGGGGCGACGAGTCATAG
Upstream 100 bases:
>100_bases GGTAAGTCTGCGCACCGACAAGAAACCCGGTAGTAACGCAATCACTGTCCAAGCGGCACGGCAGAGGTAACCAATCCATT CGACATGCGACCCTTTGAGC
Downstream 100 bases:
>100_bases CGAGCCCACGGGCTACCTATCGAACTGCGGGCAGTACGCCATGATCGCGCTGCGGATGGCGTAGGTGGCTTCCGGCTTAC CCCACGTACCGCCCTCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MDQDDLPRTARVSIVAPSPEGELAEVALLFTNIVRRDTAAFREELQNLVNSLAETSETKPVITESQTPYPGGGLAQYGIA FAVGLPTALAYNVIYDALKKLSHRFSWTAGSPPQERFLMENANPLALGAIEQGFGVARDDLRPVVVDVQGLRAHVVYHAK DGSMFTVEMENTGQFAITSVRKNWPNAGWGDES
Sequences:
>Translated_193_residues MDQDDLPRTARVSIVAPSPEGELAEVALLFTNIVRRDTAAFREELQNLVNSLAETSETKPVITESQTPYPGGGLAQYGIA FAVGLPTALAYNVIYDALKKLSHRFSWTAGSPPQERFLMENANPLALGAIEQGFGVARDDLRPVVVDVQGLRAHVVYHAK DGSMFTVEMENTGQFAITSVRKNWPNAGWGDES >Mature_193_residues MDQDDLPRTARVSIVAPSPEGELAEVALLFTNIVRRDTAAFREELQNLVNSLAETSETKPVITESQTPYPGGGLAQYGIA FAVGLPTALAYNVIYDALKKLSHRFSWTAGSPPQERFLMENANPLALGAIEQGFGVARDDLRPVVVDVQGLRAHVVYHAK DGSMFTVEMENTGQFAITSVRKNWPNAGWGDES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21033; Mature: 21033
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQDDLPRTARVSIVAPSPEGELAEVALLFTNIVRRDTAAFREELQNLVNSLAETSETKP CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VITESQTPYPGGGLAQYGIAFAVGLPTALAYNVIYDALKKLSHRFSWTAGSPPQERFLME EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHC NANPLALGAIEQGFGVARDDLRPVVVDVQGLRAHVVYHAKDGSMFTVEMENTGQFAITSV CCCCEEEECHHHCCCCCCCCCCEEEEEECCCEEEEEEEECCCCEEEEEECCCCCEEEEEH RKNWPNAGWGDES HHCCCCCCCCCCC >Mature Secondary Structure MDQDDLPRTARVSIVAPSPEGELAEVALLFTNIVRRDTAAFREELQNLVNSLAETSETKP CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VITESQTPYPGGGLAQYGIAFAVGLPTALAYNVIYDALKKLSHRFSWTAGSPPQERFLME EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHC NANPLALGAIEQGFGVARDDLRPVVVDVQGLRAHVVYHAKDGSMFTVEMENTGQFAITSV CCCCEEEECHHHCCCCCCCCCCEEEEEECCCEEEEEEEECCCCEEEEEECCCCCEEEEEH RKNWPNAGWGDES HHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA