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The map label for this gene is insF1 [C]

Identifier: 41408254

GI number: 41408254

Start: 2387810

End: 2388772

Strand: Direct

Name: insF1 [C]

Synonym: MAP2156

Alternate gene names: 41408254

Gene position: 2387810-2388772 (Clockwise)

Preceding gene: 41408253

Following gene: 41408255

Centisome position: 49.44

GC content: 65.21

Gene sequence:

>963_bases
CTGATCTGTGCGTTCATCACCGAGCATCGTGCTCGGTTCGGAGTCGCTCCGATCTGCCGCGTGCTCACCGAGCATGGCTG
CAAGATCGCCCCGAGAACGTTCTACGCCTGGCTGGCCCGAGCCCCGTCCGCCCGGGCCTTGTGGGACACGGTCATCACCG
AGGTGCTGGCCGGCTACTACGAGCCCGACGAGCACGGTCGACGCAAGCCGGAGTCGTTGTACGGAGCCACGAAGATGTGG
GCTCACCTGCAACGCCAGGGCATCGGCGTGGCCCGCTGCACCGTGGAGCGCCTGATGCGGGCCAACGGGTGGCGTGGGGT
CACCCGCCGCAAGAAGGTCCGCACCACGATCGCTGATCCAGCCGCGGCACGTGCTGCGGATCTGGTGAAACGCAAGTTTC
GAGTGCCCGCTCCCAACATGTTGCTTGTGGCCGATTTCACCTACGTCCGACTGGCTTCCGGGGCGTTCGTCTACACCGCG
TTCGCCATCGATGCCTACGCGGGACGGATCGTGGGCTGGACCTGCTCGGCCAGCAAGGAGGACCGGTTCCTACGCCAGGC
CATCCGGGACGCCGCGCAACTCCGATCCAATGAAGGTAATCCATTGTTGGGCAACACCGTTCATCATTCGGACGCGGGCT
CGCAATATACCTCGGTGCGGTTCGGGGAAACCCTATCGCTGTCGGGGCTGGTCCCGTCCATCGGCACGGTCGGCGACGCC
TTCGATAACGCCCTGGCCGAGACGACCATAGGGCTGTACAAGACCGAAGCGGTGCGGGCGGATTCACCGTTCCGGCGCGG
ACCGCTGAACCGGCTGGCCGACGTCGAAATGCTCACCGCCGACTGGGTGCACTGGTACAACACCGACCGGCTCATGCACC
GCCTGGGCCGCATCCCACCGGTCGAATACGAGGCCATCTACTACGCTGCAAACACAGCCCAATCCGCGGCCGCACACCAG
TAA

Upstream 100 bases:

>100_bases
ACCGGGAGCTCAAGCGTAAGGTCGCCGAGTTGGAGCAGACCGTCGAGATGTTAAGGGCAGCAACAACTTTCTTCGTGCGG
GAGAGCGACCCGCGACACCG

Downstream 100 bases:

>100_bases
ACAGATGTGCAGCAAACCCAGGGCGGTTCGAATTGCCCAGGGACGTCGGGTATGGCTTTCATGTGGTTGCTGTGTTGGAT
GGCCGAAGGAGATTGGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MICAFITEHRARFGVAPICRVLTEHGCKIAPRTFYAWLARAPSARALWDTVITEVLAGYYEPDEHGRRKPESLYGATKMW
AHLQRQGIGVARCTVERLMRANGWRGVTRRKKVRTTIADPAAARAADLVKRKFRVPAPNMLLVADFTYVRLASGAFVYTA
FAIDAYAGRIVGWTCSASKEDRFLRQAIRDAAQLRSNEGNPLLGNTVHHSDAGSQYTSVRFGETLSLSGLVPSIGTVGDA
FDNALAETTIGLYKTEAVRADSPFRRGPLNRLADVEMLTADWVHWYNTDRLMHRLGRIPPVEYEAIYYAANTAQSAAAHQ

Sequences:

>Translated_320_residues
MICAFITEHRARFGVAPICRVLTEHGCKIAPRTFYAWLARAPSARALWDTVITEVLAGYYEPDEHGRRKPESLYGATKMW
AHLQRQGIGVARCTVERLMRANGWRGVTRRKKVRTTIADPAAARAADLVKRKFRVPAPNMLLVADFTYVRLASGAFVYTA
FAIDAYAGRIVGWTCSASKEDRFLRQAIRDAAQLRSNEGNPLLGNTVHHSDAGSQYTSVRFGETLSLSGLVPSIGTVGDA
FDNALAETTIGLYKTEAVRADSPFRRGPLNRLADVEMLTADWVHWYNTDRLMHRLGRIPPVEYEAIYYAANTAQSAAAHQ
>Mature_320_residues
MICAFITEHRARFGVAPICRVLTEHGCKIAPRTFYAWLARAPSARALWDTVITEVLAGYYEPDEHGRRKPESLYGATKMW
AHLQRQGIGVARCTVERLMRANGWRGVTRRKKVRTTIADPAAARAADLVKRKFRVPAPNMLLVADFTYVRLASGAFVYTA
FAIDAYAGRIVGWTCSASKEDRFLRQAIRDAAQLRSNEGNPLLGNTVHHSDAGSQYTSVRFGETLSLSGLVPSIGTVGDA
FDNALAETTIGLYKTEAVRADSPFRRGPLNRLADVEMLTADWVHWYNTDRLMHRLGRIPPVEYEAIYYAANTAQSAAAHQ

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=262, Percent_Identity=42.3664122137405, Blast_Score=174, Evalue=7e-44,
Organism=Escherichia coli, GI1788405, Length=307, Percent_Identity=24.4299674267101, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1787263, Length=307, Percent_Identity=24.4299674267101, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1786753, Length=307, Percent_Identity=24.4299674267101, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1786570, Length=307, Percent_Identity=24.4299674267101, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1786490, Length=307, Percent_Identity=24.4299674267101, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1789981, Length=273, Percent_Identity=22.7106227106227, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 35588; Mature: 35588

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICAFITEHRARFGVAPICRVLTEHGCKIAPRTFYAWLARAPSARALWDTVITEVLAGYY
CEEEEEEHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
EPDEHGRRKPESLYGATKMWAHLQRQGIGVARCTVERLMRANGWRGVTRRKKVRTTIADP
CCCHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCH
AAARAADLVKRKFRVPAPNMLLVADFTYVRLASGAFVYTAFAIDAYAGRIVGWTCSASKE
HHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHCCCHHHHHHHHHHHCCEEEEEECCCCHH
DRFLRQAIRDAAQLRSNEGNPLLGNTVHHSDAGSQYTSVRFGETLSLSGLVPSIGTVGDA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCHHHHH
FDNALAETTIGLYKTEAVRADSPFRRGPLNRLADVEMLTADWVHWYNTDRLMHRLGRIPP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCC
VEYEAIYYAANTAQSAAAHQ
CCEEEEEEECCCHHHHHCCC
>Mature Secondary Structure
MICAFITEHRARFGVAPICRVLTEHGCKIAPRTFYAWLARAPSARALWDTVITEVLAGYY
CEEEEEEHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
EPDEHGRRKPESLYGATKMWAHLQRQGIGVARCTVERLMRANGWRGVTRRKKVRTTIADP
CCCHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCH
AAARAADLVKRKFRVPAPNMLLVADFTYVRLASGAFVYTAFAIDAYAGRIVGWTCSASKE
HHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHCCCHHHHHHHHHHHCCEEEEEECCCCHH
DRFLRQAIRDAAQLRSNEGNPLLGNTVHHSDAGSQYTSVRFGETLSLSGLVPSIGTVGDA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCHHHHH
FDNALAETTIGLYKTEAVRADSPFRRGPLNRLADVEMLTADWVHWYNTDRLMHRLGRIPP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCC
VEYEAIYYAANTAQSAAAHQ
CCEEEEEEECCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]