| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408247
Identifier: 41408247
GI number: 41408247
Start: 2379909
End: 2380553
Strand: Reverse
Name: 41408247
Synonym: MAP2149c
Alternate gene names: NA
Gene position: 2380553-2379909 (Counterclockwise)
Preceding gene: 41408250
Following gene: 41408245
Centisome position: 49.29
GC content: 68.37
Gene sequence:
>645_bases GTGGCCCGCGCATCCCGGAGGCCATCACGCCGCCTCCCGCGCGGCGACGATGGTGGCCCACAGGTTGTCGGCAGTGTCGC AACAATCCAACAGGTCTTCGCGTACCAGCTCGCGACCCAACCGGTCCTAAAAACAGCTCGCACACAACCAGCCCTGCGTG GGCGGGCCGTAGATGCGCCACAGCTCGTCACTCACCCGGTAACAGTCGGCACGGCCGCCGCACCACTTGCACGGCCACCA TGCGCCCCGGTCGTCTGCTATCGCGCCAGTCTCGTCATCCCGGCCGGTCCGGTAGCCCTCGCAGAAGGCGTCCACCCAGC CGCCGTCATACCCGTCATCCCAGCCGCCGACGTAGCCCTCATCCCACCCCACGTCGAAGCCGATGTCACGGCCATCGTTG AGGCCGTGGGCGTAGTCCTCCTCGCTCACGCCGCCACCCCGTCCCGGCGACGGCGCCGGGACTCGACGGACTTCAACGCC ATCTTCTTGAAGTGGGCCGCGCGGGCGTTCTCGGCCATCTTGGCGCGCAGGGCGGGGGGTAGCTTGCCCTCGGGATCGAC CTGCTTTTCGAAGCGGTCCCATGCCGCCTTACGGGCGTTATGCGTTCGCGCGGAACGGTTTTCGGTGCGCGCCCAGCTCT CGTGA
Upstream 100 bases:
>100_bases ACCCTCTACTTATAAGGACACTTCTGGGCAAAAACGTGAATGTTGAAATCGCATTTCCCCAGGTCGCCCCAAAAGCGTGT GACCAACCTCACATTGACAG
Downstream 100 bases:
>100_bases ACGGCGACCTGTAAGCGCAAACGGCGCTCAGTAGATGTTGACACTTGCGTACTCCTGGCATCCTTGATCAGGCCCCCGAG ATGCCAACTCGCCCAAGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MARASRRPSRRLPRGDDGGPQVVGSVATIQQVFAYQLATQPVLKTARTQPALRGRAVDAPQLVTHPVTVGTAAAPLARPP CAPVVCYRASLVIPAGPVALAEGVHPAAVIPVIPAADVALIPPHVEADVTAIVEAVGVVLLAHAATPSRRRRRDSTDFNA IFLKWAARAFSAILARRAGGSLPSGSTCFSKRSHAALRALCVRAERFSVRAQLS
Sequences:
>Translated_214_residues MARASRRPSRRLPRGDDGGPQVVGSVATIQQVFAYQLATQPVLKTARTQPALRGRAVDAPQLVTHPVTVGTAAAPLARPP CAPVVCYRASLVIPAGPVALAEGVHPAAVIPVIPAADVALIPPHVEADVTAIVEAVGVVLLAHAATPSRRRRRDSTDFNA IFLKWAARAFSAILARRAGGSLPSGSTCFSKRSHAALRALCVRAERFSVRAQLS >Mature_213_residues ARASRRPSRRLPRGDDGGPQVVGSVATIQQVFAYQLATQPVLKTARTQPALRGRAVDAPQLVTHPVTVGTAAAPLARPPC APVVCYRASLVIPAGPVALAEGVHPAAVIPVIPAADVALIPPHVEADVTAIVEAVGVVLLAHAATPSRRRRRDSTDFNAI FLKWAARAFSAILARRAGGSLPSGSTCFSKRSHAALRALCVRAERFSVRAQLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22417; Mature: 22286
Theoretical pI: Translated: 12.04; Mature: 12.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARASRRPSRRLPRGDDGGPQVVGSVATIQQVFAYQLATQPVLKTARTQPALRGRAVDAP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCC QLVTHPVTVGTAAAPLARPPCAPVVCYRASLVIPAGPVALAEGVHPAAVIPVIPAADVAL HHHCCCCCCCCCCCCCCCCCCCCHHHHHHEEECCCCCHHHHCCCCCCEEEECCCCCCEEE IPPHVEADVTAIVEAVGVVLLAHAATPSRRRRRDSTDFNAIFLKWAARAFSAILARRAGG ECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC SLPSGSTCFSKRSHAALRALCVRAERFSVRAQLS CCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECC >Mature Secondary Structure ARASRRPSRRLPRGDDGGPQVVGSVATIQQVFAYQLATQPVLKTARTQPALRGRAVDAP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCC QLVTHPVTVGTAAAPLARPPCAPVVCYRASLVIPAGPVALAEGVHPAAVIPVIPAADVAL HHHCCCCCCCCCCCCCCCCCCCCHHHHHHEEECCCCCHHHHCCCCCCEEEECCCCCCEEE IPPHVEADVTAIVEAVGVVLLAHAATPSRRRRRDSTDFNAIFLKWAARAFSAILARRAGG ECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC SLPSGSTCFSKRSHAALRALCVRAERFSVRAQLS CCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA