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The map label for this gene is uspE

Identifier: 41408189

GI number: 41408189

Start: 2311995

End: 2312822

Strand: Direct

Name: uspE

Synonym: MAP2091

Alternate gene names: 41408189

Gene position: 2311995-2312822 (Clockwise)

Preceding gene: 41408188

Following gene: 41408190

Centisome position: 47.87

GC content: 65.94

Gene sequence:

>828_bases
ATGACCTCACCTGACCGCGCTCGCGCCAACATCGCGATCTACGCCGGCCTGCTGGTGGGCGCGTTGATCACGTTGGCGCC
GTTCACACTTGGCTTGCTGACGGCGTTCACCTCGGCGCATCAATTCGTCACCGGCACCCCGTTGCAGCTGCCGCGACCGC
CCACCCTGTCCAATTTCGCCGACCTGGCCGGGGCCGGGTTCGGCCGCGCGGCGGCGGTGACGGCGTTGATGACGGCGGTC
ATCCTGGTCGGCCAGCTGACGTTCTCGGTGCTGGCCGGATACGCGTTCGCGCGCTTGCGGTTTCCCGGCCGCGACGCGCT
GTTCTGGGTCTACATCGCGACGCTGATGGTGCCGGGCACGGTCACCATCGTGCCGATGTATCTGATGATGGCCCAGCTGG
GCCTGCGCAACACGTTCTGGGCGTTGGTGCTGCCGTTCATGTTCGGCTCGCCGTACGCAATCTTCCTGCTGCGCGAGCAC
TTTCGCATGATTCCGAACGACCTGGTCAATGCCGCCCGCCTGGACGGCGCCCACACCCTGGACGTGATCGTGCACGTGGT
GATCCCGTCCAGCCGGCCGGTGCTGGCCGCGCTGGCGTTGATCACCGTGGTCTCGCAGTGGAACAACTTCATGTGGCCGT
TGGTGATCACCAGCGGGCACAAGTGGCGGGTGCTCACGGTGGCGACCGCCGATCTGCAGACCCGGTTCAACGCGCAATGG
ACGCTGGTGATGGCGGCGACCACCATCGCGATCGTCCCGCTGGTCACGCTGTTCGTCATCTTCCAGCGTCACATCGTCGC
CTCGATCGTCGTCTCGGGACTCAAGTGA

Upstream 100 bases:

>100_bases
GCGGCCATCGGCCGGGCGTCGGTGATGGCGGTGGTGCTGTTCGTGATCCTGATCGGCGTCACCCTGGTTCAGCATCTGTA
TTTCCGGCGGCGGATCAGCT

Downstream 100 bases:

>100_bases
CCCGGCCCCGCTTCTCCACGCTGGTCGCCGGGGCGGTGGCGCTGGTCGCCGCGTTGCTGGCCGCGGCGGCGGTGCTGCTG
GATTATTCCGGGCAGCCGCA

Product: UspE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MTSPDRARANIAIYAGLLVGALITLAPFTLGLLTAFTSAHQFVTGTPLQLPRPPTLSNFADLAGAGFGRAAAVTALMTAV
ILVGQLTFSVLAGYAFARLRFPGRDALFWVYIATLMVPGTVTIVPMYLMMAQLGLRNTFWALVLPFMFGSPYAIFLLREH
FRMIPNDLVNAARLDGAHTLDVIVHVVIPSSRPVLAALALITVVSQWNNFMWPLVITSGHKWRVLTVATADLQTRFNAQW
TLVMAATTIAIVPLVTLFVIFQRHIVASIVVSGLK

Sequences:

>Translated_275_residues
MTSPDRARANIAIYAGLLVGALITLAPFTLGLLTAFTSAHQFVTGTPLQLPRPPTLSNFADLAGAGFGRAAAVTALMTAV
ILVGQLTFSVLAGYAFARLRFPGRDALFWVYIATLMVPGTVTIVPMYLMMAQLGLRNTFWALVLPFMFGSPYAIFLLREH
FRMIPNDLVNAARLDGAHTLDVIVHVVIPSSRPVLAALALITVVSQWNNFMWPLVITSGHKWRVLTVATADLQTRFNAQW
TLVMAATTIAIVPLVTLFVIFQRHIVASIVVSGLK
>Mature_274_residues
TSPDRARANIAIYAGLLVGALITLAPFTLGLLTAFTSAHQFVTGTPLQLPRPPTLSNFADLAGAGFGRAAAVTALMTAVI
LVGQLTFSVLAGYAFARLRFPGRDALFWVYIATLMVPGTVTIVPMYLMMAQLGLRNTFWALVLPFMFGSPYAIFLLREHF
RMIPNDLVNAARLDGAHTLDVIVHVVIPSSRPVLAALALITVVSQWNNFMWPLVITSGHKWRVLTVATADLQTRFNAQWT
LVMAATTIAIVPLVTLFVIFQRHIVASIVVSGLK

Specific function: Part of the binding-protein-dependent transport system for L-arabinose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=282, Percent_Identity=31.2056737588652, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1787571, Length=279, Percent_Identity=26.1648745519713, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI1790464, Length=199, Percent_Identity=24.6231155778894, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29888; Mature: 29757

Theoretical pI: Translated: 11.54; Mature: 11.54

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPDRARANIAIYAGLLVGALITLAPFTLGLLTAFTSAHQFVTGTPLQLPRPPTLSNFA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
DLAGAGFGRAAAVTALMTAVILVGQLTFSVLAGYAFARLRFPGRDALFWVYIATLMVPGT
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCH
VTIVPMYLMMAQLGLRNTFWALVLPFMFGSPYAIFLLREHFRMIPNDLVNAARLDGAHTL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHH
DVIVHVVIPSSRPVLAALALITVVSQWNNFMWPLVITSGHKWRVLTVATADLQTRFNAQW
HHHEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEHHHHHHCCCEE
TLVMAATTIAIVPLVTLFVIFQRHIVASIVVSGLK
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSPDRARANIAIYAGLLVGALITLAPFTLGLLTAFTSAHQFVTGTPLQLPRPPTLSNFA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
DLAGAGFGRAAAVTALMTAVILVGQLTFSVLAGYAFARLRFPGRDALFWVYIATLMVPGT
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCH
VTIVPMYLMMAQLGLRNTFWALVLPFMFGSPYAIFLLREHFRMIPNDLVNAARLDGAHTL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHH
DVIVHVVIPSSRPVLAALALITVVSQWNNFMWPLVITSGHKWRVLTVATADLQTRFNAQW
HHHEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEHHHHHHCCCEE
TLVMAATTIAIVPLVTLFVIFQRHIVASIVVSGLK
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]