| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408174
Identifier: 41408174
GI number: 41408174
Start: 2284303
End: 2285235
Strand: Reverse
Name: 41408174
Synonym: MAP2076c
Alternate gene names: NA
Gene position: 2285235-2284303 (Counterclockwise)
Preceding gene: 41408175
Following gene: 41408173
Centisome position: 47.32
GC content: 66.56
Gene sequence:
>933_bases ATGCCACGCACAGACAACGACACCTGGGACCTTTCCACCAGTGTGGGCGCCACCGCCACGATGGTGGCCGCCGCACGCGC CATCGCGACCAACGCCGACAACCCTCTGATCGAGGACCGATTCGCCGAACCGCTGGTTCGCGCCGTCGGGGTGGACTTCT TCACCCGCTGGGTCACCGGCGACCTCGTCGCCGCCGACGTCGACGACCACGACTCCGGTTGGAAGCTCGAGCACATGCCC GTGGCGATGGCCGCCCGTACCCGCTTCTTCGACTCCTTCTTCCAGGCCGCGACGCAGGCCGGGATCCGGCAGGCGGTGAT TCTGGCCTCCGGCCTCGACGCGCGCGCCTACCGGTTGGCCTGGCCGGCCGGTACGACGGTGTTCGAGATCGACCAACCTC AGGTGATCGAATTCAAGACCGCCACGCTGGCAAAGCTGGGCGCGACCCCGCAGGCCACACTGCGCACCGTCGCCGTCGAC CTGCGCGATGACTGGCCAAAAGCCTTGGTGGAAGCGGGTTTTGACAAGGGCCAGCCCACCGCATGGATCGCCGAGGGGCT GTTCGGCTATCTGCCGCCGGAGGCCCAGGACCGCCTGCTGGACAACATCACCGCACTCAGCGCCGACGGCAGCCGGCTGG CGTGCGAAGCTATTCCGGACATGTCAGAGGTAGACACCGAGAAGGCTCAAGAGATGATGCGCAGGGCCACCGCGAAATGG CGGGAGCACGGCTTCGACCTGGAATTCGGCGATCTGGGGTATCAGGGCGAGCGCAACGATGTCGCCGAGTACCTGGACGG CCTGGGCTGGCGGTCGGTCGGCGTTCCGATGAGTCAGCTGTTGGCCGACGCCGGACTCGAGGCGATCCCGCAGACCAACG ACTCCGTGTCGGTGGCCGATACCATCTACTACAGCTCGGTGCTGGCAAAATGA
Upstream 100 bases:
>100_bases GACCAGCGAAATAGCTGGTCGGCGGCGCGTGGGAACTCATCGCGCCCGCCGGTCGTTATATCAGCTAAGTAACCGGTGAT TTCGAGGGGGTAATAGCCGC
Downstream 100 bases:
>100_bases CCGCACCGCAGCGGCGAGGGCTGAACGACGTCGTCACGCGGATGTGGAGCTTCCTGGCGCCGGCGTATGACCTGCCCTTC CTGCAGCAGTGGGTGTACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MPRTDNDTWDLSTSVGATATMVAAARAIATNADNPLIEDRFAEPLVRAVGVDFFTRWVTGDLVAADVDDHDSGWKLEHMP VAMAARTRFFDSFFQAATQAGIRQAVILASGLDARAYRLAWPAGTTVFEIDQPQVIEFKTATLAKLGATPQATLRTVAVD LRDDWPKALVEAGFDKGQPTAWIAEGLFGYLPPEAQDRLLDNITALSADGSRLACEAIPDMSEVDTEKAQEMMRRATAKW REHGFDLEFGDLGYQGERNDVAEYLDGLGWRSVGVPMSQLLADAGLEAIPQTNDSVSVADTIYYSSVLAK
Sequences:
>Translated_310_residues MPRTDNDTWDLSTSVGATATMVAAARAIATNADNPLIEDRFAEPLVRAVGVDFFTRWVTGDLVAADVDDHDSGWKLEHMP VAMAARTRFFDSFFQAATQAGIRQAVILASGLDARAYRLAWPAGTTVFEIDQPQVIEFKTATLAKLGATPQATLRTVAVD LRDDWPKALVEAGFDKGQPTAWIAEGLFGYLPPEAQDRLLDNITALSADGSRLACEAIPDMSEVDTEKAQEMMRRATAKW REHGFDLEFGDLGYQGERNDVAEYLDGLGWRSVGVPMSQLLADAGLEAIPQTNDSVSVADTIYYSSVLAK >Mature_309_residues PRTDNDTWDLSTSVGATATMVAAARAIATNADNPLIEDRFAEPLVRAVGVDFFTRWVTGDLVAADVDDHDSGWKLEHMPV AMAARTRFFDSFFQAATQAGIRQAVILASGLDARAYRLAWPAGTTVFEIDQPQVIEFKTATLAKLGATPQATLRTVAVDL RDDWPKALVEAGFDKGQPTAWIAEGLFGYLPPEAQDRLLDNITALSADGSRLACEAIPDMSEVDTEKAQEMMRRATAKWR EHGFDLEFGDLGYQGERNDVAEYLDGLGWRSVGVPMSQLLADAGLEAIPQTNDSVSVADTIYYSSVLAK
Specific function: Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0677 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2076_MYCPA (Q73Y81)
Other databases:
- EMBL: AE016958 - RefSeq: NP_961010.1 - ProteinModelPortal: Q73Y81 - SMR: Q73Y81 - EnsemblBacteria: EBMYCT00000038411 - GeneID: 2721054 - GenomeReviews: AE016958_GR - KEGG: mpa:MAP2076c - NMPDR: fig|262316.1.peg.2076 - GeneTree: EBGT00050000015698 - HOGENOM: HBG570783 - OMA: LACEAIP - ProtClustDB: CLSK763539 - InterPro: IPR011610 - InterPro: IPR007213 - TIGRFAMs: TIGR00027
Pfam domain/function: PF04072 LCM
EC number: NA
Molecular weight: Translated: 33751; Mature: 33620
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: BINDING 131-131
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRTDNDTWDLSTSVGATATMVAAARAIATNADNPLIEDRFAEPLVRAVGVDFFTRWVTG CCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC DLVAADVDDHDSGWKLEHMPVAMAARTRFFDSFFQAATQAGIRQAVILASGLDARAYRLA CEEEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE WPAGTTVFEIDQPQVIEFKTATLAKLGATPQATLRTVAVDLRDDWPKALVEAGFDKGQPT CCCCCEEEECCCCCEEEEHHHHHHHHCCCCHHHHHHEEEHHHCCHHHHHHHCCCCCCCCH AWIAEGLFGYLPPEAQDRLLDNITALSADGSRLACEAIPDMSEVDTEKAQEMMRRATAKW HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHCCCHHHCCHHHHHHHHHHHHHHH REHGFDLEFGDLGYQGERNDVAEYLDGLGWRSVGVPMSQLLADAGLEAIPQTNDSVSVAD HHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHCCCCCCCCHHHH TIYYSSVLAK HHHHHHHHCC >Mature Secondary Structure PRTDNDTWDLSTSVGATATMVAAARAIATNADNPLIEDRFAEPLVRAVGVDFFTRWVTG CCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC DLVAADVDDHDSGWKLEHMPVAMAARTRFFDSFFQAATQAGIRQAVILASGLDARAYRLA CEEEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE WPAGTTVFEIDQPQVIEFKTATLAKLGATPQATLRTVAVDLRDDWPKALVEAGFDKGQPT CCCCCEEEECCCCCEEEEHHHHHHHHCCCCHHHHHHEEEHHHCCHHHHHHHCCCCCCCCH AWIAEGLFGYLPPEAQDRLLDNITALSADGSRLACEAIPDMSEVDTEKAQEMMRRATAKW HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHCCCHHHCCHHHHHHHHHHHHHHH REHGFDLEFGDLGYQGERNDVAEYLDGLGWRSVGVPMSQLLADAGLEAIPQTNDSVSVAD HHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHCCCCCCCCHHHH TIYYSSVLAK HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA