| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408163
Identifier: 41408163
GI number: 41408163
Start: 2272407
End: 2273729
Strand: Direct
Name: 41408163
Synonym: MAP2065
Alternate gene names: NA
Gene position: 2272407-2273729 (Clockwise)
Preceding gene: 41408162
Following gene: 41408164
Centisome position: 47.05
GC content: 68.86
Gene sequence:
>1323_bases GTGGGCACATCGGAGGACAAGGCCCCCGGGCAGCCGGTCATCCATCTCTCGCAACTGCTGCGGGCGCCGGTGCTGGCGCG CTCGGGCGAAACGGTGGGCCGGGTCGAGGACGTGATCGTGCGGCTGCGCGGAGCCGACGAGTACCCGCTGGTGACCGGGA TCGTGGCCGGCGTCGGCGGGCGGCGGGTGTTCGTCGGCGACAAATCGATTCACGAATACTCCGCGGATCGAGTCCTGTTG ACCAAGAACAAGATTGACCTTCGCGGCTTCGAACGCCGGGAAGGCGAGGTGTTGTTGCGCACCGACGTGTTGGGCCACCG GCTGATCGACGTGGCCACCGTCGAGCTGGTGCGCGCCTACGACATCGAACTCGAGCAGACCACCGCCGGCTGGATGGTCG CCCGGCTGGACACCCGCCGTCCGCCCCGGTTGTTCGGGCTGATCAAGCACTCCGGGGGCCACGCGTCGCGCGACTGGAAG GCGTTCGAGCCGCTGATCGGCCACGCCCGCTCCGATGCGGTGCGCCGGCTGTCGGACCGGTTCGGCGAGCTCAAGGCCGC CGAGATCGCGGACCTGCTGGAAGAAGCCGACAAGGCCGAGGGCGGCGAGATCCTGGACCGGGTGCACAGCGACCCCGAAC TGGAAGCCGACGTCTTCGAAGAGCTGGACCCGGAGAAGGCCAGCCGGCTGCTCGACGAGATGCCCGATGACGAGGTCGCC GCGTTGCTGGGGCGGATGCGCGCCGACGACGCCGCCGACGCGATCGTCGATCTGCGCCAGTCGCGGCGCCGCCGCGTGCT CGACCTGATGCCCGCCCCGCAACGCACCAAGGTCATCACGTTGATGGGTTTCAACCCCGAAAGCGCCGGCGGGCTGATGA ACGTCGACTCGGTCTCCTGCGCGGCCAGCGCCACGGCGGCCGAGGCGCTGGCGTTGATCGCCTCCTCGCACAGCATTCAG CCCGAGGCGCTGATCAAGGTGCACGTGCTCGACGAGGACCGCCGGCTCGACGGCGTCGTTTGGGTGATCACCCTGCTACA GGTCGATCCCTCCGAAACCCTTGAGCGGCTGATGGATTCCGATCCGGTGCGGGTCAACGCCGACGCCGACCTGACCGACA TCGCGTTGCTGATGGCCGATTTCAACCTCTACTCGATCCCCGTCGTCGACGAGCAGGACCACCTGCTCGGCGTGGTGACC GTCGACGACGTGCTGGAGGCCACCATCCCCGAAGACTGGCGCCGCCGAGAGCCCGCGCCCCGCCCGATTCGCGAAATCAC CACCGCTGAGGACCGCCCGCTGCCCGGAGGTAACGCACCGTGA
Upstream 100 bases:
>100_bases CTCTGTCGGCCCGGCCACATTGACGCGGTAGCCGCCAGCACGGCCTGGATTAGGGGTAGGTTGTCGGCGGGTTCGGTCGT ACCGCCTTGAGGAGGGATAC
Downstream 100 bases:
>100_bases GCTCAGCCGGCGAGAACACCCGCCGCGCCGAGCCGGTGGAACCCCGGGGCGCGGCAGTGCTCGACAGCGCGCATTTGGGC GACATCGAGGGCGCGTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MGTSEDKAPGQPVIHLSQLLRAPVLARSGETVGRVEDVIVRLRGADEYPLVTGIVAGVGGRRVFVGDKSIHEYSADRVLL TKNKIDLRGFERREGEVLLRTDVLGHRLIDVATVELVRAYDIELEQTTAGWMVARLDTRRPPRLFGLIKHSGGHASRDWK AFEPLIGHARSDAVRRLSDRFGELKAAEIADLLEEADKAEGGEILDRVHSDPELEADVFEELDPEKASRLLDEMPDDEVA ALLGRMRADDAADAIVDLRQSRRRRVLDLMPAPQRTKVITLMGFNPESAGGLMNVDSVSCAASATAAEALALIASSHSIQ PEALIKVHVLDEDRRLDGVVWVITLLQVDPSETLERLMDSDPVRVNADADLTDIALLMADFNLYSIPVVDEQDHLLGVVT VDDVLEATIPEDWRRREPAPRPIREITTAEDRPLPGGNAP
Sequences:
>Translated_440_residues MGTSEDKAPGQPVIHLSQLLRAPVLARSGETVGRVEDVIVRLRGADEYPLVTGIVAGVGGRRVFVGDKSIHEYSADRVLL TKNKIDLRGFERREGEVLLRTDVLGHRLIDVATVELVRAYDIELEQTTAGWMVARLDTRRPPRLFGLIKHSGGHASRDWK AFEPLIGHARSDAVRRLSDRFGELKAAEIADLLEEADKAEGGEILDRVHSDPELEADVFEELDPEKASRLLDEMPDDEVA ALLGRMRADDAADAIVDLRQSRRRRVLDLMPAPQRTKVITLMGFNPESAGGLMNVDSVSCAASATAAEALALIASSHSIQ PEALIKVHVLDEDRRLDGVVWVITLLQVDPSETLERLMDSDPVRVNADADLTDIALLMADFNLYSIPVVDEQDHLLGVVT VDDVLEATIPEDWRRREPAPRPIREITTAEDRPLPGGNAP >Mature_439_residues GTSEDKAPGQPVIHLSQLLRAPVLARSGETVGRVEDVIVRLRGADEYPLVTGIVAGVGGRRVFVGDKSIHEYSADRVLLT KNKIDLRGFERREGEVLLRTDVLGHRLIDVATVELVRAYDIELEQTTAGWMVARLDTRRPPRLFGLIKHSGGHASRDWKA FEPLIGHARSDAVRRLSDRFGELKAAEIADLLEEADKAEGGEILDRVHSDPELEADVFEELDPEKASRLLDEMPDDEVAA LLGRMRADDAADAIVDLRQSRRRRVLDLMPAPQRTKVITLMGFNPESAGGLMNVDSVSCAASATAAEALALIASSHSIQP EALIKVHVLDEDRRLDGVVWVITLLQVDPSETLERLMDSDPVRVNADADLTDIALLMADFNLYSIPVVDEQDHLLGVVTV DDVLEATIPEDWRRREPAPRPIREITTAEDRPLPGGNAP
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 48456; Mature: 48324
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTSEDKAPGQPVIHLSQLLRAPVLARSGETVGRVEDVIVRLRGADEYPLVTGIVAGVGG CCCCCCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC RRVFVGDKSIHEYSADRVLLTKNKIDLRGFERREGEVLLRTDVLGHRLIDVATVELVRAY CEEEECCCHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH DIELEQTTAGWMVARLDTRRPPRLFGLIKHSGGHASRDWKAFEPLIGHARSDAVRRLSDR CCEEECCCCCEEEEEECCCCCCHHEEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHHH FGELKAAEIADLLEEADKAEGGEILDRVHSDPELEADVFEELDPEKASRLLDEMPDDEVA HCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHCCCHHHH ALLGRMRADDAADAIVDLRQSRRRRVLDLMPAPQRTKVITLMGFNPESAGGLMNVDSVSC HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEECCCCHHH AASATAAEALALIASSHSIQPEALIKVHVLDEDRRLDGVVWVITLLQVDPSETLERLMDS HHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHEEEEHHHCCCHHHHHHHHHCC DPVRVNADADLTDIALLMADFNLYSIPVVDEQDHLLGVVTVDDVLEATIPEDWRRREPAP CCEEEECCCCHHHHHHHHHCCCEEEEEEECCCCCEEEEEEHHHHHHHCCCHHHHHCCCCC RPIREITTAEDRPLPGGNAP CCHHHHCCCCCCCCCCCCCC >Mature Secondary Structure GTSEDKAPGQPVIHLSQLLRAPVLARSGETVGRVEDVIVRLRGADEYPLVTGIVAGVGG CCCCCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC RRVFVGDKSIHEYSADRVLLTKNKIDLRGFERREGEVLLRTDVLGHRLIDVATVELVRAY CEEEECCCHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH DIELEQTTAGWMVARLDTRRPPRLFGLIKHSGGHASRDWKAFEPLIGHARSDAVRRLSDR CCEEECCCCCEEEEEECCCCCCHHEEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHHH FGELKAAEIADLLEEADKAEGGEILDRVHSDPELEADVFEELDPEKASRLLDEMPDDEVA HCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHCCCHHHH ALLGRMRADDAADAIVDLRQSRRRRVLDLMPAPQRTKVITLMGFNPESAGGLMNVDSVSC HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEECCCCHHH AASATAAEALALIASSHSIQPEALIKVHVLDEDRRLDGVVWVITLLQVDPSETLERLMDS HHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHEEEEHHHCCCHHHHHHHHHCC DPVRVNADADLTDIALLMADFNLYSIPVVDEQDHLLGVVTVDDVLEATIPEDWRRREPAP CCEEEECCCCHHHHHHHHHCCCEEEEEEECCCCCEEEEEEHHHHHHHCCCHHHHHCCCCC RPIREITTAEDRPLPGGNAP CCHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA