Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408160

Identifier: 41408160

GI number: 41408160

Start: 2270041

End: 2270994

Strand: Direct

Name: 41408160

Synonym: MAP2062

Alternate gene names: NA

Gene position: 2270041-2270994 (Clockwise)

Preceding gene: 41408159

Following gene: 41408162

Centisome position: 47.0

GC content: 69.71

Gene sequence:

>954_bases
CTGAGCCTCGGCGCGAAGACTCGGGTTGCCGGCGTCGATACACACGGAAGAGAGCTAGTGGGCAGAACGGACATCGCGAC
GGTGCTCGCGGTCGCGGCCGCCCTCATGGTGGGCGCGGGCGACGTCGCCCAACAGCAATCGGCTCAGCAGGTCACGGATC
AACCGGTCGGCACCGTCGCGCTGTTTCGCCGGCTGCTGCGGGACCGGCGCTGGTGGACCGGAAGCCTGGTGGCCGCCGGC
GGATTCGGCTTTCAGGCTGCAGCGCTGGGTTTCGGCTCGGTGGTACTGGTGCAGGCGCTGTTGGTGACGTCGTTGCTGTT
CGCCCTGCTGATCAGCGCGCGGGTGAACCACCGCAGAATCACTGGGCGGCAAGCGGTTTGGGCGCTACTGCTGGCCGCCG
CCGTCGCGGTGGTGGTCACGGTGGGCGACCCGCAGGAGGGAACCCCGCGGGGATCGCTGCAGACGTGGACGATCGTGGCA
CTGGTCATGGGGCCGGCGCTGGTTGGGTGCGTGCTCGGCGCACGCCTGTATCCCGGCCCGGTCGCCGCGTTGTTGCTCGG
CCTGATGTCCGGTTCGCTGTGGGGCCTGTTTGCGGTGCTGACCAAGGGCGTGGTCGACCAACTCGACCGCGGCATCCCGG
CATTGCTGCGCACACCCGAGCTGTATGTGTGGGTGCTGCTGGCCATCGCGGCCACCGCCTGGGAGCAGTCGGCGTTCCGG
GCCGGCCCGCTGACGGCGTCGCTTCCGGCGGTGACCGTCGCCGAGCCGGTCATCGGGTCGGTGCTCGGCGTCACCGTGCT
CGGTGAAACGTTGCGGACCAACGGCATTGGCCTGGTGGCACTGGGCATCTCGGTGGCGGTGATGGCGGCCGCGACGGTGG
CGCTGGCCCGCAGCCAGGCCGCATCGGCCCCAACAGCTGACGAAACTCCGCCGTTCTCAACGGAAAAGACGTGA

Upstream 100 bases:

>100_bases
TGTGGTGGGACAAGCCGTGGCCGATGCGGATCGCCGCCCTGGCCCGGCTGCCGCTGCAGATTCCGATGATCACCACGGCG
CTCAGGATTCGGCGCAACAG

Downstream 100 bases:

>100_bases
TCAGCTGCGCGGCGAGCCGACCCGGTGCGCGGTGCCGTCGGGGTCCACGTAGGCGAATTCGCGCAAACCGTACGGTGTGT
CGTGCGGAGCCAACAGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: ORFX [H]

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MSLGAKTRVAGVDTHGRELVGRTDIATVLAVAAALMVGAGDVAQQQSAQQVTDQPVGTVALFRRLLRDRRWWTGSLVAAG
GFGFQAAALGFGSVVLVQALLVTSLLFALLISARVNHRRITGRQAVWALLLAAAVAVVVTVGDPQEGTPRGSLQTWTIVA
LVMGPALVGCVLGARLYPGPVAALLLGLMSGSLWGLFAVLTKGVVDQLDRGIPALLRTPELYVWVLLAIAATAWEQSAFR
AGPLTASLPAVTVAEPVIGSVLGVTVLGETLRTNGIGLVALGISVAVMAAATVALARSQAASAPTADETPPFSTEKT

Sequences:

>Translated_317_residues
MSLGAKTRVAGVDTHGRELVGRTDIATVLAVAAALMVGAGDVAQQQSAQQVTDQPVGTVALFRRLLRDRRWWTGSLVAAG
GFGFQAAALGFGSVVLVQALLVTSLLFALLISARVNHRRITGRQAVWALLLAAAVAVVVTVGDPQEGTPRGSLQTWTIVA
LVMGPALVGCVLGARLYPGPVAALLLGLMSGSLWGLFAVLTKGVVDQLDRGIPALLRTPELYVWVLLAIAATAWEQSAFR
AGPLTASLPAVTVAEPVIGSVLGVTVLGETLRTNGIGLVALGISVAVMAAATVALARSQAASAPTADETPPFSTEKT
>Mature_316_residues
SLGAKTRVAGVDTHGRELVGRTDIATVLAVAAALMVGAGDVAQQQSAQQVTDQPVGTVALFRRLLRDRRWWTGSLVAAGG
FGFQAAALGFGSVVLVQALLVTSLLFALLISARVNHRRITGRQAVWALLLAAAVAVVVTVGDPQEGTPRGSLQTWTIVAL
VMGPALVGCVLGARLYPGPVAALLLGLMSGSLWGLFAVLTKGVVDQLDRGIPALLRTPELYVWVLLAIAATAWEQSAFRA
GPLTASLPAVTVAEPVIGSVLGVTVLGETLRTNGIGLVALGISVAVMAAATVALARSQAASAPTADETPPFSTEKT

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008521 [H]

Pfam domain/function: PF05653 DUF803 [H]

EC number: NA

Molecular weight: Translated: 32537; Mature: 32405

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLGAKTRVAGVDTHGRELVGRTDIATVLAVAAALMVGAGDVAQQQSAQQVTDQPVGTVA
CCCCCCCEEECCCCCCHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH
LFRRLLRDRRWWTGSLVAAGGFGFQAAALGFGSVVLVQALLVTSLLFALLISARVNHRRI
HHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
TGRQAVWALLLAAAVAVVVTVGDPQEGTPRGSLQTWTIVALVMGPALVGCVLGARLYPGP
HHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
VAALLLGLMSGSLWGLFAVLTKGVVDQLDRGIPALLRTPELYVWVLLAIAATAWEQSAFR
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHC
AGPLTASLPAVTVAEPVIGSVLGVTVLGETLRTNGIGLVALGISVAVMAAATVALARSQA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ASAPTADETPPFSTEKT
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLGAKTRVAGVDTHGRELVGRTDIATVLAVAAALMVGAGDVAQQQSAQQVTDQPVGTVA
CCCCCCEEECCCCCCHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH
LFRRLLRDRRWWTGSLVAAGGFGFQAAALGFGSVVLVQALLVTSLLFALLISARVNHRRI
HHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
TGRQAVWALLLAAAVAVVVTVGDPQEGTPRGSLQTWTIVALVMGPALVGCVLGARLYPGP
HHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
VAALLLGLMSGSLWGLFAVLTKGVVDQLDRGIPALLRTPELYVWVLLAIAATAWEQSAFR
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHC
AGPLTASLPAVTVAEPVIGSVLGVTVLGETLRTNGIGLVALGISVAVMAAATVALARSQA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ASAPTADETPPFSTEKT
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8117072; 12948626 [H]