Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408154

Identifier: 41408154

GI number: 41408154

Start: 2264993

End: 2265721

Strand: Reverse

Name: 41408154

Synonym: MAP2056c

Alternate gene names: NA

Gene position: 2265721-2264993 (Counterclockwise)

Preceding gene: 41408156

Following gene: 41408152

Centisome position: 46.91

GC content: 64.88

Gene sequence:

>729_bases
ATGGCAATTCGGCGCGCGGTGCTGCTCATCGCCGACATCGGTGGTTACACGCATTACATGCAGTGGAACCGGACGCATCT
CGCGCATGCCCAGCTGACCGTCGCGGGACTGCTGGAGTCGGTGATCAACGCGGGCAAGGGCCTGAAGCTGGCCAAGCTCG
AGGGCGATGCCGCGTTCTTCTGGGCGCCGGACAGCAGCGCCAAAGTGGTGGTCTGCGAGCGGCTGTCGCGGATGCGCACG
TCGTTCCTGCAGCGGCGCGAGCGGATGAAGAACGACATCGCCTGCCAGTGCGCGAGCTGCGCCCAGCTGGAGCAGCTGTC
GCTCAAATTCGTGGTTCACGTCGGCGAGGTGGCCGATCAGCGGGTGAAGCGGCACGTCGAACTGGCCGGATTCGACGTCA
TTCTGGTGCATCGAATGCTGAAAAACCTGGTGCCGGTTGCGGAATACGTGCTGATGACCGATCCGGTCGTGGACTGCCTC
GACGAGCCGATGCGCGCGCTGTGCATGCCGCTGGTGCACGTGTTCGAAGGGATCGGCGAAACGCCGACGTACTACATCGA
CTTGGCGGAGGTGCGGGTTCCGGTCACCGAGCCGCAGCGCAGTTTGCTGCGTCGGCTCGGCGCGACCATGAGGTTCGAGT
TCAACTCGCTGCCGTTCACCCTGGGCATGAAGGAGCCCGCGGAAGGGTTCCGCAACTTGGGCCGGGGCGGGGAGGAGATT
CCCGCGTAG

Upstream 100 bases:

>100_bases
TCGTGAACCGGCACCTCTGCTAGCCTCTCTCGCCGACGGGCATTCGTCTAGTAGCAGATTCGTTGAGCTACACCGTTGCG
GCCACTAAACTGGCCTCTTC

Downstream 100 bases:

>100_bases
CGCGGGCGGGGCTAGCCGGACCGGCCGGCCAGCGCGCGGCCCATGCGCGACAGCGCCTCGGTGAGGATCGCGCGCGAGGT
GGCGAAGTTCAGTCGCAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MAIRRAVLLIADIGGYTHYMQWNRTHLAHAQLTVAGLLESVINAGKGLKLAKLEGDAAFFWAPDSSAKVVVCERLSRMRT
SFLQRRERMKNDIACQCASCAQLEQLSLKFVVHVGEVADQRVKRHVELAGFDVILVHRMLKNLVPVAEYVLMTDPVVDCL
DEPMRALCMPLVHVFEGIGETPTYYIDLAEVRVPVTEPQRSLLRRLGATMRFEFNSLPFTLGMKEPAEGFRNLGRGGEEI
PA

Sequences:

>Translated_242_residues
MAIRRAVLLIADIGGYTHYMQWNRTHLAHAQLTVAGLLESVINAGKGLKLAKLEGDAAFFWAPDSSAKVVVCERLSRMRT
SFLQRRERMKNDIACQCASCAQLEQLSLKFVVHVGEVADQRVKRHVELAGFDVILVHRMLKNLVPVAEYVLMTDPVVDCL
DEPMRALCMPLVHVFEGIGETPTYYIDLAEVRVPVTEPQRSLLRRLGATMRFEFNSLPFTLGMKEPAEGFRNLGRGGEEI
PA
>Mature_241_residues
AIRRAVLLIADIGGYTHYMQWNRTHLAHAQLTVAGLLESVINAGKGLKLAKLEGDAAFFWAPDSSAKVVVCERLSRMRTS
FLQRRERMKNDIACQCASCAQLEQLSLKFVVHVGEVADQRVKRHVELAGFDVILVHRMLKNLVPVAEYVLMTDPVVDCLD
EPMRALCMPLVHVFEGIGETPTYYIDLAEVRVPVTEPQRSLLRRLGATMRFEFNSLPFTLGMKEPAEGFRNLGRGGEEIP
A

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020503
- ProDom:   PD066345 [H]

Pfam domain/function: PF10851 DUF2652 [H]

EC number: NA

Molecular weight: Translated: 27121; Mature: 26990

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRRAVLLIADIGGYTHYMQWNRTHLAHAQLTVAGLLESVINAGKGLKLAKLEGDAAFF
CCHHHHHHEEEECCCCHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEE
WAPDSSAKVVVCERLSRMRTSFLQRRERMKNDIACQCASCAQLEQLSLKFVVHVGEVADQ
ECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVKRHVELAGFDVILVHRMLKNLVPVAEYVLMTDPVVDCLDEPMRALCMPLVHVFEGIGE
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
TPTYYIDLAEVRVPVTEPQRSLLRRLGATMRFEFNSLPFTLGMKEPAEGFRNLGRGGEEI
CCEEEEEEEHEECCCCCHHHHHHHHCCCCEEEEECCCCEEECCCCHHHHHHHHCCCCCCC
PA
CC
>Mature Secondary Structure 
AIRRAVLLIADIGGYTHYMQWNRTHLAHAQLTVAGLLESVINAGKGLKLAKLEGDAAFF
CHHHHHHEEEECCCCHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEE
WAPDSSAKVVVCERLSRMRTSFLQRRERMKNDIACQCASCAQLEQLSLKFVVHVGEVADQ
ECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVKRHVELAGFDVILVHRMLKNLVPVAEYVLMTDPVVDCLDEPMRALCMPLVHVFEGIGE
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
TPTYYIDLAEVRVPVTEPQRSLLRRLGATMRFEFNSLPFTLGMKEPAEGFRNLGRGGEEI
CCEEEEEEEHEECCCCCHHHHHHHHCCCCEEEEECCCCEEECCCCHHHHHHHHCCCCCCC
PA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]