Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is pksS [H]

Identifier: 41408128

GI number: 41408128

Start: 2236277

End: 2237545

Strand: Direct

Name: pksS [H]

Synonym: MAP2030

Alternate gene names: 41408128

Gene position: 2236277-2237545 (Clockwise)

Preceding gene: 41408124

Following gene: 41408131

Centisome position: 46.3

GC content: 64.85

Gene sequence:

>1269_bases
ATGGCCACACGTCCGAACGTCAGCCCCGACGCGATCGTCGACTTCGACCATCACTCCGACGCGTTCAACCTCAACGAACT
GGCCGTCAACGCCGAACTGCGGCAACGATGTCCGGTCGCGTGGAACGAGAACTACGGCGGGTTCTGGTTCCTCAGCAGCT
ACGACGCCGTCAGCCAAACCGCCCGCGACGGCGACACTTTCGCCCACAAGTACGAGCCGAACGCCGCAGACGGCGTGGAC
TACCAGGGCGAGATGGGCGTCCCGCGACCCGAAGGCCAACCGGCCCTGGGCCTCGGCGAGGTCGACGGCCCCTACCACCA
AGCGCTACGCCACGCGCTGGCCCCGTTCTTCTCCCCCGGCGCCGTCGAGAAACTCAAGCCGTTCATGGAGCATTCCGCCC
ACTGGTTCCTCGACCAACAGATAACCACCGGGCAGATGGACCTAGTGCTCGACTACGCCAGCCCCGTCCCGGCCATCCTC
ACCATGAAGCTGATGGGTCTGCCATACGACAATTGGCACCTGTACGCCAACCTGTTTCACTCGGTCATGGCGGTCTCCCA
GGACAGCGACGAGTACGCCGCCGCGATCGCCAAAGTGCCGGCGATGATGCAAGAAGTCCTCGACTACGCCGCCACCCGAC
GCGCGAAACCGGAAGAAGACCTAACCAGCTTCCTCATTCGATTCGAGTTCGACGGCCACCGCCTCACCGACGAGCAGCTG
CTCAACATCCTGTGGAACCTGATCGGCGGCGGCGTCGACACCACCACCTCGCAGACCGCGCTGACCCTGCTGCACCTGGG
CACCCACCCCGACCTCCGGCAGCAACTCATCGACCACCCCGAGCTCTACCGCACCGCCACCGACGAATTCCTGCGCTACT
TCTCGGTCAACCAAACCCTCAGTCGCACAGTCACTCACGACGTTGTCCTGGCCGGCCAACGGCTGCGCAAGAACGACCGC
GTCGTCATCAGCTGGCTGTCGGCCAACCACGACGAAAACGAATTCCACCGGCCCGACGAGATCATCCTCGACCGCGCACC
CAACCGGCACGTCGCCTTCGGCCTGGGTCCGCACCGCTGCATCGGCTCCCACCTGGCGCGGCTGATGTCGGAGGTCATGG
TCAGGGCGGTTCTTGTCCGCATCCCGGACTACCAGGTCGACGTCGACAACGTGCACCAGTACCTGGGCAACCCCAGCATG
ACGGGCCTGGGCCAGCTGCCGGTCACCTTCGCACCCGGAAGGAGCCGAAAAGCATTGCGGCCGTGGTGA

Upstream 100 bases:

>100_bases
CTACTGCAACCAGCTGGAACGCGTAATAATGCAAACGATAAACCAATAGCCGCCCGCTTCCGCCGAATACGCAAATCACC
TTCCGTTGGAGGGCTTTTCG

Downstream 100 bases:

>100_bases
TCCCGTGCCATTACACGCAACGGTCCCATTGGCCGCTTCGACAGGAGTGCCATCACATCCGCTAGCAGATTTGGGAGTGA
TCTCATGGTAGGCAAACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MATRPNVSPDAIVDFDHHSDAFNLNELAVNAELRQRCPVAWNENYGGFWFLSSYDAVSQTARDGDTFAHKYEPNAADGVD
YQGEMGVPRPEGQPALGLGEVDGPYHQALRHALAPFFSPGAVEKLKPFMEHSAHWFLDQQITTGQMDLVLDYASPVPAIL
TMKLMGLPYDNWHLYANLFHSVMAVSQDSDEYAAAIAKVPAMMQEVLDYAATRRAKPEEDLTSFLIRFEFDGHRLTDEQL
LNILWNLIGGGVDTTTSQTALTLLHLGTHPDLRQQLIDHPELYRTATDEFLRYFSVNQTLSRTVTHDVVLAGQRLRKNDR
VVISWLSANHDENEFHRPDEIILDRAPNRHVAFGLGPHRCIGSHLARLMSEVMVRAVLVRIPDYQVDVDNVHQYLGNPSM
TGLGQLPVTFAPGRSRKALRPW

Sequences:

>Translated_422_residues
MATRPNVSPDAIVDFDHHSDAFNLNELAVNAELRQRCPVAWNENYGGFWFLSSYDAVSQTARDGDTFAHKYEPNAADGVD
YQGEMGVPRPEGQPALGLGEVDGPYHQALRHALAPFFSPGAVEKLKPFMEHSAHWFLDQQITTGQMDLVLDYASPVPAIL
TMKLMGLPYDNWHLYANLFHSVMAVSQDSDEYAAAIAKVPAMMQEVLDYAATRRAKPEEDLTSFLIRFEFDGHRLTDEQL
LNILWNLIGGGVDTTTSQTALTLLHLGTHPDLRQQLIDHPELYRTATDEFLRYFSVNQTLSRTVTHDVVLAGQRLRKNDR
VVISWLSANHDENEFHRPDEIILDRAPNRHVAFGLGPHRCIGSHLARLMSEVMVRAVLVRIPDYQVDVDNVHQYLGNPSM
TGLGQLPVTFAPGRSRKALRPW
>Mature_421_residues
ATRPNVSPDAIVDFDHHSDAFNLNELAVNAELRQRCPVAWNENYGGFWFLSSYDAVSQTARDGDTFAHKYEPNAADGVDY
QGEMGVPRPEGQPALGLGEVDGPYHQALRHALAPFFSPGAVEKLKPFMEHSAHWFLDQQITTGQMDLVLDYASPVPAILT
MKLMGLPYDNWHLYANLFHSVMAVSQDSDEYAAAIAKVPAMMQEVLDYAATRRAKPEEDLTSFLIRFEFDGHRLTDEQLL
NILWNLIGGGVDTTTSQTALTLLHLGTHPDLRQQLIDHPELYRTATDEFLRYFSVNQTLSRTVTHDVVLAGQRLRKNDRV
VISWLSANHDENEFHRPDEIILDRAPNRHVAFGLGPHRCIGSHLARLMSEVMVRAVLVRIPDYQVDVDNVHQYLGNPSMT
GLGQLPVTFAPGRSRKALRPW

Specific function: Involved in the metabolism of the antibiotic polyketide bacillaene which is involved in secondary metabolism. The substrate is dihydrobacillaene [H]

COG id: COG2124

COG function: function code Q; Cytochrome P450

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome P450 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001128
- InterPro:   IPR002397
- InterPro:   IPR017972 [H]

Pfam domain/function: PF00067 p450 [H]

EC number: NA

Molecular weight: Translated: 47487; Mature: 47356

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS00086 CYTOCHROME_P450

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATRPNVSPDAIVDFDHHSDAFNLNELAVNAELRQRCPVAWNENYGGFWFLSSYDAVSQT
CCCCCCCCCCCEEECCCCCCCCCHHHHEECHHHHHCCCCCCCCCCCCEEEEECCHHHHHH
ARDGDTFAHKYEPNAADGVDYQGEMGVPRPEGQPALGLGEVDGPYHQALRHALAPFFSPG
HCCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
AVEKLKPFMEHSAHWFLDQQITTGQMDLVLDYASPVPAILTMKLMGLPYDNWHLYANLFH
HHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHH
SVMAVSQDSDEYAAAIAKVPAMMQEVLDYAATRRAKPEEDLTSFLIRFEFDGHRLTDEQL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEEEEEECCCCCCHHHH
LNILWNLIGGGVDTTTSQTALTLLHLGTHPDLRQQLIDHPELYRTATDEFLRYFSVNQTL
HHHHHHHHCCCCCCCCHHHHEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
SRTVTHDVVLAGQRLRKNDRVVISWLSANHDENEFHRPDEIILDRAPNRHVAFGLGPHRC
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCEEEECCCHHHH
IGSHLARLMSEVMVRAVLVRIPDYQVDVDNVHQYLGNPSMTGLGQLPVTFAPGRSRKALR
HHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCC
PW
CC
>Mature Secondary Structure 
ATRPNVSPDAIVDFDHHSDAFNLNELAVNAELRQRCPVAWNENYGGFWFLSSYDAVSQT
CCCCCCCCCCEEECCCCCCCCCHHHHEECHHHHHCCCCCCCCCCCCEEEEECCHHHHHH
ARDGDTFAHKYEPNAADGVDYQGEMGVPRPEGQPALGLGEVDGPYHQALRHALAPFFSPG
HCCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
AVEKLKPFMEHSAHWFLDQQITTGQMDLVLDYASPVPAILTMKLMGLPYDNWHLYANLFH
HHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHH
SVMAVSQDSDEYAAAIAKVPAMMQEVLDYAATRRAKPEEDLTSFLIRFEFDGHRLTDEQL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEEEEEECCCCCCHHHH
LNILWNLIGGGVDTTTSQTALTLLHLGTHPDLRQQLIDHPELYRTATDEFLRYFSVNQTL
HHHHHHHHCCCCCCCCHHHHEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
SRTVTHDVVLAGQRLRKNDRVVISWLSANHDENEFHRPDEIILDRAPNRHVAFGLGPHRC
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCEEEECCCHHHH
IGSHLARLMSEVMVRAVLVRIPDYQVDVDNVHQYLGNPSMTGLGQLPVTFAPGRSRKALR
HHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCC
PW
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]