Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41408114

Identifier: 41408114

GI number: 41408114

Start: 2225136

End: 2225648

Strand: Direct

Name: 41408114

Synonym: MAP2016

Alternate gene names: NA

Gene position: 2225136-2225648 (Clockwise)

Preceding gene: 41408113

Following gene: 41408115

Centisome position: 46.07

GC content: 65.3

Gene sequence:

>513_bases
GTGCTGGCCGCCCGCCAGAAGCTGGTGCTCGACCACTTCCACGACGAGGTCCGCCACGCCTGGGACGACGTGTTGTCGAC
CTTCCCGCATCCGCGTTACGAGCTGATCCCGCAAATGATCGTGCACGACGGCGAAGCGGCGGTGCGCGACTACTATGCCT
ACACGCGGACCGCGTTCCCCGACCAGGACCACGAGATCATCGCGCTGCGGCACAGCGCCGACGCGGTGATCGTCGAATTC
TGGCTGATGGGCACGCATCGCGGTTACCTGGGCAAGGTGCCGCCCACCGGCAGCCAGTTCCGCGTCCGCATGACCGCCTA
CTTCCTGTTCGACGACACCGAAACCCTTGTCTGCGAACGCATTTACTTCGACACCCTGACCATGATCAAACAGCTGCTGG
GTGGGCTGGACATGAGGAGGCCGGGCAACTGGCTGTTGGCCGCGCGCTGCGTGCGGGGGTTCTTGGCGATGTCGTCGGAA
AAACCGGAGCCGGCGCTGACCGGCGCGCCGTAA

Upstream 100 bases:

>100_bases
TAGCACATCCGCTATCGGATTCGCGGCGCGAACACCGCCCCGTGCCGGGCCGCCGGATTACGCTGACCCGGTGACCATCC
CCGCGTTTCCCGCTCCCGAC

Downstream 100 bases:

>100_bases
ACTCCATCCAGGCAAGGGATTCAGGGAGGCTTCCGATGCGGGTTCGGCGGCTGCGCACCCGGTGCGGCCTGGCCGCGGTC
GCGGCGGTGGGCTGCTGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MLAARQKLVLDHFHDEVRHAWDDVLSTFPHPRYELIPQMIVHDGEAAVRDYYAYTRTAFPDQDHEIIALRHSADAVIVEF
WLMGTHRGYLGKVPPTGSQFRVRMTAYFLFDDTETLVCERIYFDTLTMIKQLLGGLDMRRPGNWLLAARCVRGFLAMSSE
KPEPALTGAP

Sequences:

>Translated_170_residues
MLAARQKLVLDHFHDEVRHAWDDVLSTFPHPRYELIPQMIVHDGEAAVRDYYAYTRTAFPDQDHEIIALRHSADAVIVEF
WLMGTHRGYLGKVPPTGSQFRVRMTAYFLFDDTETLVCERIYFDTLTMIKQLLGGLDMRRPGNWLLAARCVRGFLAMSSE
KPEPALTGAP
>Mature_170_residues
MLAARQKLVLDHFHDEVRHAWDDVLSTFPHPRYELIPQMIVHDGEAAVRDYYAYTRTAFPDQDHEIIALRHSADAVIVEF
WLMGTHRGYLGKVPPTGSQFRVRMTAYFLFDDTETLVCERIYFDTLTMIKQLLGGLDMRRPGNWLLAARCVRGFLAMSSE
KPEPALTGAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19524; Mature: 19524

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAARQKLVLDHFHDEVRHAWDDVLSTFPHPRYELIPQMIVHDGEAAVRDYYAYTRTAFP
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
DQDHEIIALRHSADAVIVEFWLMGTHRGYLGKVPPTGSQFRVRMTAYFLFDDTETLVCER
CCCCEEEEEECCCCEEEHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHH
IYFDTLTMIKQLLGGLDMRRPGNWLLAARCVRGFLAMSSEKPEPALTGAP
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLAARQKLVLDHFHDEVRHAWDDVLSTFPHPRYELIPQMIVHDGEAAVRDYYAYTRTAFP
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
DQDHEIIALRHSADAVIVEFWLMGTHRGYLGKVPPTGSQFRVRMTAYFLFDDTETLVCER
CCCCEEEEEECCCCEEEHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHH
IYFDTLTMIKQLLGGLDMRRPGNWLLAARCVRGFLAMSSEKPEPALTGAP
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA