| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is adhE2
Identifier: 41408106
GI number: 41408106
Start: 2217017
End: 2218102
Strand: Direct
Name: adhE2
Synonym: MAP2008
Alternate gene names: 41408106
Gene position: 2217017-2218102 (Clockwise)
Preceding gene: 41408103
Following gene: 41408107
Centisome position: 45.9
GC content: 69.61
Gene sequence:
>1086_bases ATGAGTCAGACAGTGCGCGGCGTGATTTCACGCAAGAAGGGCGAACCCGTTGAGTTGGTCGACATCGTCGTTCCCGATCC CGGGCCGGGTGAGGCGCTGGTCGACGTCATCGCCTGCGGGGTCTGCCACACCGACCTGACCTACCGCGAGGGCGGCATCA ACGACGAGTACCCGTTTCTGCTCGGCCACGAGGCCGCCGGCCGGGTCGAGGCCGTCGGCCCCGACGTGACCGCGGTGCAG CCGGGCGACTTCGTGGTGCTGAACTGGCGCGCGGTGTGCGGGCAGTGCCGGGCCTGCAAGCGCGGCCGCCCGCACCTGTG CTTCGACACCTTCAACGCCACCCAGAAGATGACGCTGACCGACGGCACCGAGCTGACACCGGCGCTGGGCATCGGGGCGT TCGCCGACAAGACACTGGTGGCCGCCGGCCAGTGCACCAAGGTCGACCCCGCCGCCGATCCCGCCGTCGCCGGGCTGCTG GGTTGCGGGGTGATGGCCGGGCTGGGCGCGGCGATCAACACCGGTGCCGTCGCCCGCGATGACACCGTCGCGGTGATCGG CTGCGGCGGCGTGGGCAATGCCGCGATCGCGGGCGCGGCGCTGGTGGGCGCCCGGCGCATCATCGCCGTCGACACCGACG ACACCAAACTGGACTGGGCCCGCGGCTTCGGCGCCACCCACACCGTCAACGCCCGCCAGGCCGACGTGGTGGCCGCGATT CAGGACCTCACCGACGGGTTCGGCGCCAACGTGGTGATCGACGCGGTGGGCCGCCCGGAAACCTGGAAGCAGGCCTTCTA CGCCCGCGACCTGGCGGGAACCGTTGTGCTGGTGGGTGTTCCGACTCCCGACATGACGCTGGAGATGCCGCTGGTGGACT TCTTCAGCCACGGCGGGTCGTTGAAGTCGTCCTGGTACGGCGACTGCCTGCCCGAACGCGACTTCCCCACGCTGATCGAG CTGTATCTGCAGGGCCGGCTTCCCCTCGAAAAGTTCGTCTCCGAGCGCATCGGGCTCGGCGACGTCGAAGCCGCCTTCCA CAACATGCACGACGGCAAGGTGCTGCGCTCGGTGGTGATGCTGTAA
Upstream 100 bases:
>100_bases CGGTCGTCTCCAAAGCCGTCACGCCCAGGGACGCTACACCGGCTCGATGGGTGGACGGCCCGCCGCGAGATGTATGGCGG ACGACAGTAGGTTGGAGCCC
Downstream 100 bases:
>100_bases ATGGCCGGCATCGACAAGATCGTCACCCACGGCACCTTCGAACTCGACGGCGGCAGTTGGGAAGTCGACAACAACATCTG GATCGTCGGCGACGACTCCG
Product: AdhE2
Products: NA
Alternate protein names: NAD/mycothiol-dependent formaldehyde dehydrogenase; MD-FALDH [H]
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MSQTVRGVISRKKGEPVELVDIVVPDPGPGEALVDVIACGVCHTDLTYREGGINDEYPFLLGHEAAGRVEAVGPDVTAVQ PGDFVVLNWRAVCGQCRACKRGRPHLCFDTFNATQKMTLTDGTELTPALGIGAFADKTLVAAGQCTKVDPAADPAVAGLL GCGVMAGLGAAINTGAVARDDTVAVIGCGGVGNAAIAGAALVGARRIIAVDTDDTKLDWARGFGATHTVNARQADVVAAI QDLTDGFGANVVIDAVGRPETWKQAFYARDLAGTVVLVGVPTPDMTLEMPLVDFFSHGGSLKSSWYGDCLPERDFPTLIE LYLQGRLPLEKFVSERIGLGDVEAAFHNMHDGKVLRSVVML
Sequences:
>Translated_361_residues MSQTVRGVISRKKGEPVELVDIVVPDPGPGEALVDVIACGVCHTDLTYREGGINDEYPFLLGHEAAGRVEAVGPDVTAVQ PGDFVVLNWRAVCGQCRACKRGRPHLCFDTFNATQKMTLTDGTELTPALGIGAFADKTLVAAGQCTKVDPAADPAVAGLL GCGVMAGLGAAINTGAVARDDTVAVIGCGGVGNAAIAGAALVGARRIIAVDTDDTKLDWARGFGATHTVNARQADVVAAI QDLTDGFGANVVIDAVGRPETWKQAFYARDLAGTVVLVGVPTPDMTLEMPLVDFFSHGGSLKSSWYGDCLPERDFPTLIE LYLQGRLPLEKFVSERIGLGDVEAAFHNMHDGKVLRSVVML >Mature_360_residues SQTVRGVISRKKGEPVELVDIVVPDPGPGEALVDVIACGVCHTDLTYREGGINDEYPFLLGHEAAGRVEAVGPDVTAVQP GDFVVLNWRAVCGQCRACKRGRPHLCFDTFNATQKMTLTDGTELTPALGIGAFADKTLVAAGQCTKVDPAADPAVAGLLG CGVMAGLGAAINTGAVARDDTVAVIGCGGVGNAAIAGAALVGARRIIAVDTDDTKLDWARGFGATHTVNARQADVVAAIQ DLTDGFGANVVIDAVGRPETWKQAFYARDLAGTVVLVGVPTPDMTLEMPLVDFFSHGGSLKSSWYGDCLPERDFPTLIEL YLQGRLPLEKFVSERIGLGDVEAAFHNMHDGKVLRSVVML
Specific function: Has High Formaldehyde Dehydrogenase Activity In The Presence Of Glutathione And Catalyzes The Oxidation Of Normal Alcohols In A Reaction That Is Not Gsh-Dependent. In Addition, Hemithiolacetals Other Than Those Formed From Gsh, Including Omega-Thiol Fatty
COG id: COG1062
COG function: function code C; Zn-dependent alcohol dehydrogenases, class III
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI34577061, Length=358, Percent_Identity=31.2849162011173, Blast_Score=179, Evalue=2e-45, Organism=Homo sapiens, GI4501929, Length=358, Percent_Identity=31.2849162011173, Blast_Score=173, Evalue=2e-43, Organism=Homo sapiens, GI71565154, Length=378, Percent_Identity=32.010582010582, Blast_Score=168, Evalue=9e-42, Organism=Homo sapiens, GI4501933, Length=358, Percent_Identity=29.0502793296089, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI156523966, Length=370, Percent_Identity=30.8108108108108, Blast_Score=165, Evalue=7e-41, Organism=Homo sapiens, GI262073058, Length=363, Percent_Identity=30.0275482093664, Blast_Score=159, Evalue=3e-39, Organism=Homo sapiens, GI71743840, Length=363, Percent_Identity=30.0275482093664, Blast_Score=159, Evalue=3e-39, Organism=Homo sapiens, GI4501939, Length=362, Percent_Identity=30.939226519337, Blast_Score=158, Evalue=7e-39, Organism=Homo sapiens, GI71565152, Length=372, Percent_Identity=29.5698924731183, Blast_Score=157, Evalue=2e-38, Organism=Escherichia coli, GI1786552, Length=368, Percent_Identity=34.2391304347826, Blast_Score=178, Evalue=5e-46, Organism=Escherichia coli, GI1790045, Length=359, Percent_Identity=25.0696378830084, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI87081918, Length=334, Percent_Identity=29.3413173652695, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1788073, Length=361, Percent_Identity=26.3157894736842, Blast_Score=101, Evalue=6e-23, Organism=Escherichia coli, GI1787863, Length=337, Percent_Identity=24.9258160237389, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1786518, Length=290, Percent_Identity=28.9655172413793, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1788407, Length=328, Percent_Identity=24.6951219512195, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI87082125, Length=299, Percent_Identity=27.7591973244147, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1788075, Length=355, Percent_Identity=26.7605633802817, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1786825, Length=251, Percent_Identity=30.2788844621514, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI226510992, Length=356, Percent_Identity=24.438202247191, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790718, Length=323, Percent_Identity=23.2198142414861, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI25146526, Length=391, Percent_Identity=30.690537084399, Blast_Score=165, Evalue=4e-41, Organism=Caenorhabditis elegans, GI71997431, Length=393, Percent_Identity=30.5343511450382, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17565904, Length=343, Percent_Identity=32.0699708454811, Blast_Score=154, Evalue=5e-38, Organism=Caenorhabditis elegans, GI17562582, Length=362, Percent_Identity=27.6243093922652, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17562584, Length=368, Percent_Identity=29.6195652173913, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71988145, Length=365, Percent_Identity=27.1232876712329, Blast_Score=88, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17562878, Length=351, Percent_Identity=24.5014245014245, Blast_Score=82, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6320033, Length=363, Percent_Identity=34.7107438016529, Blast_Score=188, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6319621, Length=352, Percent_Identity=29.5454545454545, Blast_Score=96, Evalue=7e-21, Organism=Saccharomyces cerevisiae, GI6323729, Length=369, Percent_Identity=27.9132791327913, Blast_Score=95, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6322619, Length=357, Percent_Identity=28.0112044817927, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6324486, Length=287, Percent_Identity=28.2229965156794, Blast_Score=85, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6319955, Length=357, Percent_Identity=27.7310924369748, Blast_Score=83, Evalue=7e-17, Organism=Saccharomyces cerevisiae, GI6323961, Length=363, Percent_Identity=25.068870523416, Blast_Score=82, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6319257, Length=348, Percent_Identity=24.1379310344828, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6319258, Length=324, Percent_Identity=24.0740740740741, Blast_Score=67, Evalue=4e-12, Organism=Drosophila melanogaster, GI17737895, Length=378, Percent_Identity=32.5396825396825, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI17737897, Length=350, Percent_Identity=25.7142857142857, Blast_Score=79, Evalue=6e-15, Organism=Drosophila melanogaster, GI17137530, Length=350, Percent_Identity=25.1428571428571, Blast_Score=76, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR017816 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.306 [H]
Molecular weight: Translated: 37828; Mature: 37696
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTVRGVISRKKGEPVELVDIVVPDPGPGEALVDVIACGVCHTDLTYREGGINDEYPFL CCHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCEE LGHEAAGRVEAVGPDVTAVQPGDFVVLNWRAVCGQCRACKRGRPHLCFDTFNATQKMTLT ECCCCCCCEEECCCCEEEECCCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEC DGTELTPALGIGAFADKTLVAAGQCTKVDPAADPAVAGLLGCGVMAGLGAAINTGAVARD CCCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCEECC DTVAVIGCGGVGNAAIAGAALVGARRIIAVDTDDTKLDWARGFGATHTVNARQADVVAAI CCEEEEECCCCCCHHHHHHHHHCCEEEEEECCCCCCCHHHHCCCCCEECCCCHHHHHHHH QDLTDGFGANVVIDAVGRPETWKQAFYARDLAGTVVLVGVPTPDMTLEMPLVDFFSHGGS HHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEECHHHHHHHCCCC LKSSWYGDCLPERDFPTLIELYLQGRLPLEKFVSERIGLGDVEAAFHNMHDGKVLRSVVM CCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHC L C >Mature Secondary Structure SQTVRGVISRKKGEPVELVDIVVPDPGPGEALVDVIACGVCHTDLTYREGGINDEYPFL CHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCEE LGHEAAGRVEAVGPDVTAVQPGDFVVLNWRAVCGQCRACKRGRPHLCFDTFNATQKMTLT ECCCCCCCEEECCCCEEEECCCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEC DGTELTPALGIGAFADKTLVAAGQCTKVDPAADPAVAGLLGCGVMAGLGAAINTGAVARD CCCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCEECC DTVAVIGCGGVGNAAIAGAALVGARRIIAVDTDDTKLDWARGFGATHTVNARQADVVAAI CCEEEEECCCCCCHHHHHHHHHCCEEEEEECCCCCCCHHHHCCCCCEECCCCHHHHHHHH QDLTDGFGANVVIDAVGRPETWKQAFYARDLAGTVVLVGVPTPDMTLEMPLVDFFSHGGS HHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEECHHHHHHHCCCC LKSSWYGDCLPERDFPTLIELYLQGRLPLEKFVSERIGLGDVEAAFHNMHDGKVLRSVVM CCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9346279; 1597190; 9202149 [H]