| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is morD
Identifier: 41407888
GI number: 41407888
Start: 1952072
End: 1953610
Strand: Direct
Name: morD
Synonym: MAP1790
Alternate gene names: 41407888
Gene position: 1952072-1953610 (Clockwise)
Preceding gene: 41407887
Following gene: 41407889
Centisome position: 40.42
GC content: 68.42
Gene sequence:
>1539_bases ATGACCGAGCGTTCCGAGTACTCCGACGGCCGCGCGATGGCGCTGGAACGCAGTTGCGCCGTGACGGCGGTCGCGCTGAG CGAGCAGCGCCGCGAAGGCGTGCGGCTCGTCACCGGCGAGCGGCGGGGCTTCGGACTGGATGCGGCACTCACATTCGTCC ACCTCCCCTACCCCGCACCCTCCGACTGGACACGCAGAACCCTGACCTGCGGTGTGGCCCTGCAATGCTCGCCATCCAAG GAACGCGTCACCGAATTCCGGCTGAACGAGCTGTCCGCGCGGGAACTGCGCGCGCTCACGCTCGTCGAAGGCGCCGTGGC GCTCGGCTGGATCGCGTCGCGGTGGCCCGGCCTGCTTCCCGAGGTCCAACGGCTGCTCCCCGACGTCCACCCCCAGGCCG CGGACATGGACGGCGCCCAGATGCTCGACAGGGCAATCGGATTGGCGGCGACCGGCCTGGAATTAACGGTGCCTCCGCTG CTGGGCGCTTTGCCGCTGGCCTACACGGCGCCCCAGGGATTGACCGACAGACTACGACGCAGCTTCGGGAGGATGCCGTG GACCACCACACAGAAGCGTCGTCCGCGGCCGTACTCGGTGCCCGTCGGCGGCGACGGGGGTGTGCGCAACCCGAATCTGC CGCCGCCGAGCCGGCCCCAGGACAATGATCTCGACGTCACACCCCAGCACCGGCCGGGCATCCCCTATCCCGAGTGGAAC ATGTGGACACAGCGATTCATGCACGACCACGTCGCTGTCGTCGAGCACGCCGACGGCCGCCGCCTCCGCCGTCCGGTGCC GGTGGCCGTCGATGTCCGCAAGTGGTTCGAAGAACACACCCACCGTGCAATGACCAGCCGCCTCGAAGACGGCTCGGACC TCGACGTCGACCAGTACGTCAGCCACTACATCGACCTGACGACTGGCGAGGCCAAGGAGCCGAGGGTGTTTCGCGACCTG TTGCCCAGCGGCCGCGACGTCACCACCGCACTACTGCTCGATGGCAGCTCGTCACTGGGGGTGCACGGGGGACGCGTGTT TCAGCTCGAATTGGCCTGTGCCGACGCGCTTTCGCGTGCCATGACGCTGGCGCGGGAACGCCATGGCGTTTTCGTGTTCA CCGGCAACACCCGACACCGGGTCGAAGTCCGGTGCCTGAAGGACTTCGAAGACCGCCGGTTCGTGCCGCCGAGCACACTC GGCCTGTCCACCCGCGGCTACACCAGACTCGGTGCGCCACTTCGCCATTTGACCAGCCGGCTGCTCGCCCAACCCGCCGA GCGGCGCCTGCTGATCGTCATCGGTGACGGGCTGATCTCCGATGAAGGCTACGAGGGCCGTTACGCCTGGGCCGATGCCG CGCACGCCGTCGAGGAGGCCAACGACGCCGGCGTGTCGATGTATTACGTGGGCGTCGGGCCGACCCGGGTGGACCCCCTT CCGGAGGTATTCGGGCCGCGCCGGTCGCAACGGATCCGGCGTATCGAGGAATTGCCCCGCGTATTGGCCCATGTCCATCG CGAACTGGTCGCCGCGTGA
Upstream 100 bases:
>100_bases CTATCTATGGGAGATCCTCCGCTACGTCGCCGCGTGGGGCGGCACCGGGCTGATCATCTGGTTCTGGTACTGGCTGTTCT CCAACATCGGTACGTTCTGA
Downstream 100 bases:
>100_bases ATGCCGGCCGATTGAGGAAGAGATGACCACCGACACATATTTCGCCAACGGCAACGAAGTTCAGCTGTTCGAACAGGCCT TTGCGCGGCGCCTGCCGGTA
Product: MorD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MTERSEYSDGRAMALERSCAVTAVALSEQRREGVRLVTGERRGFGLDAALTFVHLPYPAPSDWTRRTLTCGVALQCSPSK ERVTEFRLNELSARELRALTLVEGAVALGWIASRWPGLLPEVQRLLPDVHPQAADMDGAQMLDRAIGLAATGLELTVPPL LGALPLAYTAPQGLTDRLRRSFGRMPWTTTQKRRPRPYSVPVGGDGGVRNPNLPPPSRPQDNDLDVTPQHRPGIPYPEWN MWTQRFMHDHVAVVEHADGRRLRRPVPVAVDVRKWFEEHTHRAMTSRLEDGSDLDVDQYVSHYIDLTTGEAKEPRVFRDL LPSGRDVTTALLLDGSSSLGVHGGRVFQLELACADALSRAMTLARERHGVFVFTGNTRHRVEVRCLKDFEDRRFVPPSTL GLSTRGYTRLGAPLRHLTSRLLAQPAERRLLIVIGDGLISDEGYEGRYAWADAAHAVEEANDAGVSMYYVGVGPTRVDPL PEVFGPRRSQRIRRIEELPRVLAHVHRELVAA
Sequences:
>Translated_512_residues MTERSEYSDGRAMALERSCAVTAVALSEQRREGVRLVTGERRGFGLDAALTFVHLPYPAPSDWTRRTLTCGVALQCSPSK ERVTEFRLNELSARELRALTLVEGAVALGWIASRWPGLLPEVQRLLPDVHPQAADMDGAQMLDRAIGLAATGLELTVPPL LGALPLAYTAPQGLTDRLRRSFGRMPWTTTQKRRPRPYSVPVGGDGGVRNPNLPPPSRPQDNDLDVTPQHRPGIPYPEWN MWTQRFMHDHVAVVEHADGRRLRRPVPVAVDVRKWFEEHTHRAMTSRLEDGSDLDVDQYVSHYIDLTTGEAKEPRVFRDL LPSGRDVTTALLLDGSSSLGVHGGRVFQLELACADALSRAMTLARERHGVFVFTGNTRHRVEVRCLKDFEDRRFVPPSTL GLSTRGYTRLGAPLRHLTSRLLAQPAERRLLIVIGDGLISDEGYEGRYAWADAAHAVEEANDAGVSMYYVGVGPTRVDPL PEVFGPRRSQRIRRIEELPRVLAHVHRELVAA >Mature_511_residues TERSEYSDGRAMALERSCAVTAVALSEQRREGVRLVTGERRGFGLDAALTFVHLPYPAPSDWTRRTLTCGVALQCSPSKE RVTEFRLNELSARELRALTLVEGAVALGWIASRWPGLLPEVQRLLPDVHPQAADMDGAQMLDRAIGLAATGLELTVPPLL GALPLAYTAPQGLTDRLRRSFGRMPWTTTQKRRPRPYSVPVGGDGGVRNPNLPPPSRPQDNDLDVTPQHRPGIPYPEWNM WTQRFMHDHVAVVEHADGRRLRRPVPVAVDVRKWFEEHTHRAMTSRLEDGSDLDVDQYVSHYIDLTTGEAKEPRVFRDLL PSGRDVTTALLLDGSSSLGVHGGRVFQLELACADALSRAMTLARERHGVFVFTGNTRHRVEVRCLKDFEDRRFVPPSTLG LSTRGYTRLGAPLRHLTSRLLAQPAERRLLIVIGDGLISDEGYEGRYAWADAAHAVEEANDAGVSMYYVGVGPTRVDPLP EVFGPRRSQRIRRIEELPRVLAHVHRELVAA
Specific function: Part of the operon norEFCBQD encoding nitric oxide reductase. Essential virulence factor, probably involved in the detoxification of nitric oxide (NO) produced in the macrophages during the innate response against infection [H]
COG id: COG4548
COG function: function code P; Nitric oxide reductase activation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002035 [H]
Pfam domain/function: PF00092 VWA [H]
EC number: NA
Molecular weight: Translated: 57074; Mature: 56943
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS50234 VWFA ; PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTERSEYSDGRAMALERSCAVTAVALSEQRREGVRLVTGERRGFGLDAALTFVHLPYPAP CCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHEEEEEEECCCCCC SDWTRRTLTCGVALQCSPSKERVTEFRLNELSARELRALTLVEGAVALGWIASRWPGLLP CCHHCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH EVQRLLPDVHPQAADMDGAQMLDRAIGLAATGLELTVPPLLGALPLAYTAPQGLTDRLRR HHHHHCCCCCCCCCCCCHHHHHHHHHHHEECCCEEECCHHHHHCCHHHCCCCCHHHHHHH SFGRMPWTTTQKRRPRPYSVPVGGDGGVRNPNLPPPSRPQDNDLDVTPQHRPGIPYPEWN HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH MWTQRFMHDHVAVVEHADGRRLRRPVPVAVDVRKWFEEHTHRAMTSRLEDGSDLDVDQYV HHHHHHHHHHHHEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH SHYIDLTTGEAKEPRVFRDLLPSGRDVTTALLLDGSSSLGVHGGRVFQLELACADALSRA HHHEECCCCCCCCCHHHHHHCCCCCCEEEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHH MTLARERHGVFVFTGNTRHRVEVRCLKDFEDRRFVPPSTLGLSTRGYTRLGAPLRHLTSR HHHHHHHCCEEEEECCCCEEEEEEEHHCHHCCCCCCCCCCCCCCCCCHHHCHHHHHHHHH LLAQPAERRLLIVIGDGLISDEGYEGRYAWADAAHAVEEANDAGVSMYYVGVGPTRVDPL HHCCCCCCEEEEEECCCEECCCCCCCCEEHHHHHHHHHHCCCCCEEEEEEECCCCCCCCC PEVFGPRRSQRIRRIEELPRVLAHVHRELVAA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TERSEYSDGRAMALERSCAVTAVALSEQRREGVRLVTGERRGFGLDAALTFVHLPYPAP CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHEEEEEEECCCCCC SDWTRRTLTCGVALQCSPSKERVTEFRLNELSARELRALTLVEGAVALGWIASRWPGLLP CCHHCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH EVQRLLPDVHPQAADMDGAQMLDRAIGLAATGLELTVPPLLGALPLAYTAPQGLTDRLRR HHHHHCCCCCCCCCCCCHHHHHHHHHHHEECCCEEECCHHHHHCCHHHCCCCCHHHHHHH SFGRMPWTTTQKRRPRPYSVPVGGDGGVRNPNLPPPSRPQDNDLDVTPQHRPGIPYPEWN HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH MWTQRFMHDHVAVVEHADGRRLRRPVPVAVDVRKWFEEHTHRAMTSRLEDGSDLDVDQYV HHHHHHHHHHHHEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH SHYIDLTTGEAKEPRVFRDLLPSGRDVTTALLLDGSSSLGVHGGRVFQLELACADALSRA HHHEECCCCCCCCCHHHHHHCCCCCCEEEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHH MTLARERHGVFVFTGNTRHRVEVRCLKDFEDRRFVPPSTLGLSTRGYTRLGAPLRHLTSR HHHHHHHCCEEEEECCCCEEEEEEEHHCHHCCCCCCCCCCCCCCCCCHHHCHHHHHHHHH LLAQPAERRLLIVIGDGLISDEGYEGRYAWADAAHAVEEANDAGVSMYYVGVGPTRVDPL HHCCCCCCEEEEEECCCEECCCCCCCCEEHHHHHHHHHHCCCCCEEEEEEECCCCCCCCC PEVFGPRRSQRIRRIEELPRVLAHVHRELVAA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA