| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is envR [C]
Identifier: 41407886
GI number: 41407886
Start: 1950438
End: 1951037
Strand: Direct
Name: envR [C]
Synonym: MAP1788
Alternate gene names: 41407886
Gene position: 1950438-1951037 (Clockwise)
Preceding gene: 41407883
Following gene: 41407887
Centisome position: 40.38
GC content: 64.67
Gene sequence:
>600_bases ATGGCTGTGGCGGACCGGCTGTCGGCGCGTGAAGCCAAGCGCCTGCAGACGCGCGAGCGTTTGATGGGCGCCGCGATCGC CGAGTTCGCCCGCGCCGGAATGGCCGAGGCCGACGTGGGCGCGATCGTCGCCGCCGCGGGAGTTGCCCACGGCACCTTCT TCTTTCACTTCCCGACCAAGGAGCATGTACTGCTGGAGTTGGAGCGCCGGGAAGAGGAGCGGATAGCCAAGCAGTTCGCG CAATTCCTCAAGTCCGAGCACGATCTGGCGTCGGCGTTGAACGAGGCGGTCCGCTTGGTGGTGGGGCTGGAGCGCCGATT GGGCGACATGCTCTTCAATGACTTTCTCGCGCTGCACTTCTCCCAGACCCGCCCGCAGACCGAGGATGGCCGCGACCACC CGTTGATCGTCTTGGTGGCCAACGAGATCGAAGGTGCCCAGCAACGCGGCGAGACGGACCCCCATGTCAATCCCATGAAC AGCGCGGTGTTCTTCCTGTTGGGCCTGTACGCCTTGTTGATCACCACCAACCACTGGCCCACCGGACACGCCCTGTTGGA GGACTACGTCGCGAGGACTCTGCGCAGTCTGAAACCCTGA
Upstream 100 bases:
>100_bases AATAGTCAAGGTATACAAGCGCTTTTGGTGATGACGCGGCATAATGGGTCGTTGGGCATGCCGTCTTTGGCATGAGTCGG GTCAACTATAAGGAAGAGCG
Downstream 100 bases:
>100_bases CGCCGCAACGCCTTACGGGTGCCGGCCGTCGGCCGCGCGGAACAGCATCGATTCAGTACTCCTTTGCATTGTGCTGCACC GAGGTGTTCGGACGCGGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family Protein
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MAVADRLSAREAKRLQTRERLMGAAIAEFARAGMAEADVGAIVAAAGVAHGTFFFHFPTKEHVLLELERREEERIAKQFA QFLKSEHDLASALNEAVRLVVGLERRLGDMLFNDFLALHFSQTRPQTEDGRDHPLIVLVANEIEGAQQRGETDPHVNPMN SAVFFLLGLYALLITTNHWPTGHALLEDYVARTLRSLKP
Sequences:
>Translated_199_residues MAVADRLSAREAKRLQTRERLMGAAIAEFARAGMAEADVGAIVAAAGVAHGTFFFHFPTKEHVLLELERREEERIAKQFA QFLKSEHDLASALNEAVRLVVGLERRLGDMLFNDFLALHFSQTRPQTEDGRDHPLIVLVANEIEGAQQRGETDPHVNPMN SAVFFLLGLYALLITTNHWPTGHALLEDYVARTLRSLKP >Mature_198_residues AVADRLSAREAKRLQTRERLMGAAIAEFARAGMAEADVGAIVAAAGVAHGTFFFHFPTKEHVLLELERREEERIAKQFAQ FLKSEHDLASALNEAVRLVVGLERRLGDMLFNDFLALHFSQTRPQTEDGRDHPLIVLVANEIEGAQQRGETDPHVNPMNS AVFFLLGLYALLITTNHWPTGHALLEDYVARTLRSLKP
Specific function: Potential Regulator Protein For The Acref/Envcd Genes. [C]
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22223; Mature: 22091
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVADRLSAREAKRLQTRERLMGAAIAEFARAGMAEADVGAIVAAAGVAHGTFFFHFPTK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCEEEEECCCC EHVLLELERREEERIAKQFAQFLKSEHDLASALNEAVRLVVGLERRLGDMLFNDFLALHF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQTRPQTEDGRDHPLIVLVANEIEGAQQRGETDPHVNPMNSAVFFLLGLYALLITTNHWP HCCCCCCCCCCCCCEEEEEECCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC TGHALLEDYVARTLRSLKP CHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AVADRLSAREAKRLQTRERLMGAAIAEFARAGMAEADVGAIVAAAGVAHGTFFFHFPTK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCEEEEECCCC EHVLLELERREEERIAKQFAQFLKSEHDLASALNEAVRLVVGLERRLGDMLFNDFLALHF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQTRPQTEDGRDHPLIVLVANEIEGAQQRGETDPHVNPMNSAVFFLLGLYALLITTNHWP HCCCCCCCCCCCCCEEEEEECCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC TGHALLEDYVARTLRSLKP CHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA