| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407765
Identifier: 41407765
GI number: 41407765
Start: 1820402
End: 1821217
Strand: Direct
Name: 41407765
Synonym: MAP1667
Alternate gene names: NA
Gene position: 1820402-1821217 (Clockwise)
Preceding gene: 41407761
Following gene: 41407769
Centisome position: 37.69
GC content: 72.67
Gene sequence:
>816_bases GTGCGGGATTCGGCCGGACCGGGTGCACGCGGCGATCGACGACCGCCGTCACGGCGCGAGGTCCTCGGCTACGCCGCCGG ATGCGCCCTGGCACCGGTGCTGCTGAGCCTGGGAGCGGTGGCGGGCGCGGGCGGTCCGACCGCCCGCGCCGCCGGGTTGA AGCTGATCGACTTTGCCGAGCGCAGGATCGCGCCCGAGGAGATCAAGGCGGCCGGCTACGACGGCGTGGTGAACTACGTA TCGCTGTCGCGGCCGGGCGCCGACTTCGAGGCCAAACCGCTGACCCGGGACTACGCCGACGCGCTGCGCGCCGCGGGCCT GCACATCGTCAGCAACTTCCAGTACGGCAAGCCCGGATGGCCGGACCCGTCGGATTTCACCCGCGGCTACGACGGCGGCG TCGCCGATGCGCACACGGCCACGCAGTTGCACGCCGCGGCCGGCGGCCCGGACTCGGCGCCCATCTTCTTCAGCGTCGAC GACGACATCGACGCCGACACGTGGAACAACGTTGCGGTGCAATGGTTTCGGGGGATCAACTCGGTGCTGGGCGTCGGCCG TACCGGCATCTACGGGCATGCCCGGGCGTGCGGGTGGGCGATCCGTGACGGCGTCGTCGGGCCGTCCAGCACTCCCGGCC ACCGGTGGGCGTGGCAGACCCGGTCGTGGTCGCATGGCGAGCGGGAGCCCGCGGCGGTGCTGTACCAGGCCGTGGTCAAC AGCCCGGGCAGCCCGGGCCCGCTGCTGGGCGGCATCAACGTGGACGTCGACGACGTCCTCGCCGCCGACTACGGGCAGTG GGACTTCGCGCGGTGA
Upstream 100 bases:
>100_bases GTGGCCGGCGCGCGGCGCGCCCGGCGGCGCACCGGCTGCGCCCGGCTGACCGGCGCCGACGACCCGAAACCGCGACCGCG GGTTTTGCTACCATCGCGCG
Downstream 100 bases:
>100_bases CCTGAATGCACGACACCCCGCGAGCCGGTGACTCGCGGGGTGTCGCCCGGTGTCACTTCAGGTCGAAGCGGTCGTTGTTC ATCACCTTGACCCAGGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein; Twin-Arginine Translocation Pathway
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MRDSAGPGARGDRRPPSRREVLGYAAGCALAPVLLSLGAVAGAGGPTARAAGLKLIDFAERRIAPEEIKAAGYDGVVNYV SLSRPGADFEAKPLTRDYADALRAAGLHIVSNFQYGKPGWPDPSDFTRGYDGGVADAHTATQLHAAAGGPDSAPIFFSVD DDIDADTWNNVAVQWFRGINSVLGVGRTGIYGHARACGWAIRDGVVGPSSTPGHRWAWQTRSWSHGEREPAAVLYQAVVN SPGSPGPLLGGINVDVDDVLAADYGQWDFAR
Sequences:
>Translated_271_residues MRDSAGPGARGDRRPPSRREVLGYAAGCALAPVLLSLGAVAGAGGPTARAAGLKLIDFAERRIAPEEIKAAGYDGVVNYV SLSRPGADFEAKPLTRDYADALRAAGLHIVSNFQYGKPGWPDPSDFTRGYDGGVADAHTATQLHAAAGGPDSAPIFFSVD DDIDADTWNNVAVQWFRGINSVLGVGRTGIYGHARACGWAIRDGVVGPSSTPGHRWAWQTRSWSHGEREPAAVLYQAVVN SPGSPGPLLGGINVDVDDVLAADYGQWDFAR >Mature_271_residues MRDSAGPGARGDRRPPSRREVLGYAAGCALAPVLLSLGAVAGAGGPTARAAGLKLIDFAERRIAPEEIKAAGYDGVVNYV SLSRPGADFEAKPLTRDYADALRAAGLHIVSNFQYGKPGWPDPSDFTRGYDGGVADAHTATQLHAAAGGPDSAPIFFSVD DDIDADTWNNVAVQWFRGINSVLGVGRTGIYGHARACGWAIRDGVVGPSSTPGHRWAWQTRSWSHGEREPAAVLYQAVVN SPGSPGPLLGGINVDVDDVLAADYGQWDFAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28479; Mature: 28479
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDSAGPGARGDRRPPSRREVLGYAAGCALAPVLLSLGAVAGAGGPTARAAGLKLIDFAE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHH RRIAPEEIKAAGYDGVVNYVSLSRPGADFEAKPLTRDYADALRAAGLHIVSNFQYGKPGW HCCCHHHHHHCCCCCHHHEEEECCCCCCCCCCCCCHHHHHHHHHCCHHEEECCCCCCCCC PDPSDFTRGYDGGVADAHTATQLHAAAGGPDSAPIFFSVDDDIDADTWNNVAVQWFRGIN CCHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH SVLGVGRTGIYGHARACGWAIRDGVVGPSSTPGHRWAWQTRSWSHGEREPAAVLYQAVVN HHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHC SPGSPGPLLGGINVDVDDVLAADYGQWDFAR CCCCCCCEECCCCCCHHHHHHCCCCCCCCCC >Mature Secondary Structure MRDSAGPGARGDRRPPSRREVLGYAAGCALAPVLLSLGAVAGAGGPTARAAGLKLIDFAE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHH RRIAPEEIKAAGYDGVVNYVSLSRPGADFEAKPLTRDYADALRAAGLHIVSNFQYGKPGW HCCCHHHHHHCCCCCHHHEEEECCCCCCCCCCCCCHHHHHHHHHCCHHEEECCCCCCCCC PDPSDFTRGYDGGVADAHTATQLHAAAGGPDSAPIFFSVDDDIDADTWNNVAVQWFRGIN CCHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH SVLGVGRTGIYGHARACGWAIRDGVVGPSSTPGHRWAWQTRSWSHGEREPAAVLYQAVVN HHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHC SPGSPGPLLGGINVDVDDVLAADYGQWDFAR CCCCCCCEECCCCCCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA