| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407725
Identifier: 41407725
GI number: 41407725
Start: 1781905
End: 1782972
Strand: Direct
Name: 41407725
Synonym: MAP1627
Alternate gene names: NA
Gene position: 1781905-1782972 (Clockwise)
Preceding gene: 41407723
Following gene: 41407726
Centisome position: 36.89
GC content: 67.7
Gene sequence:
>1068_bases ATGCGGATCATCGACGCCGACGGTCACGTCGCCGAGAATTCCTCGCTGGCGATCGAGGCGATCCAGCGGTGGCCGGAGCA CGTCAAGCCCGGCCGGCACGGGCGGCTCGGCCTGATGATCGAGGGCCGCAACTACCCCGAGGACCGCGGCCCGGGCGCCG GGTGTCCGCCCGAGCACGGCATCAGCGACGCCCCCGACATCAACTGCCGGTCCGCCGAAGGCGTGCTGGGCGACGCCGAC CGCGATCACATCGACACCATGGTGCTCTATCCCAGCCTGGGCTTGTGCGCACCGAGCCTGCGCGACCCCGAGTTCGCCGC CGGGTTCGCCCGGCTGTACAACCGGTGGGTCGCCGACTACTGCGCCCAGTCGGGCGGACGGCTGCGCGGCGTCGCGGTCA CGCCGATCGAACACGGCCAACTGGCGATCGACGTCATGAGGGAAGCCAAAGACCTTGGGCTGGTGGCAACGTTGGTGCCG CCGGCGCTGCAGAGCCGCAACCTCGACCACCCCGATCTCGACCCGTTCTACGCCGCCGCCGTCGAACTCGAGATGCCGCT GGGCGTGCACGGCGCGCCCGGCATCCATCTGCCCAAGATCGGCGTGGACCGCTTCACTAATTACATTCAGGTGCACTGCA TCAGCTTCCCGTTCGACCAGATGACCGCGATGACCGCGATGGTGTCCGGCGGTGTCTTCGAGCGGCACCCGAAGTTGCGG GTCGCCTTCTTGGAGGCGGGCGCGGGCTGGGTGCCGTTCTTCATCGATCGCCTGCACGAGCACTACGAGAAGCGCGGCGA CTGGGTCGAGCGCGGCTGGCGCCGCGATCCGCACGAATACCTCAAGGCGGGCAACATCTTTGTGACGTGCGAGCCGGAGG AACCGATCCTGCCCGGGGTGATCGACGTGCTGGGCGCCGATTTCATCATGTTCGCCAGCGACTACCCGCACTGGGACGGC GAATGGCCGGAGAGCACCAAGCATCTGCGCACCCGCGCCGATATCAGCGAGGAAGCCCGGGAGAAGATCGGCGGCTTGAA CGCGCAACGCTTCTACAACCTGAACTGA
Upstream 100 bases:
>100_bases CCGGCCGGGACTTGGTTTGGTCACGTCAGCATCGTGGCCTACCCGGCCCGTCGGCGCGACCCGTTCCGCCGGGCGCGGCG CGGGAGTAAGTTCGCCAGAC
Downstream 100 bases:
>100_bases CCTGATCGGGGTGCCCACGCGGGCGACGGATGACAGGATGGCGGCATGGGCCCTTTTGTGCTGCGCGCGGCGTTGACCGG ATTCGCGCTGTGGATCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Aminocarboxymuconate-Semialdehyde Decarboxylase; Amidohydrolase Family Protein; Amidohydrolase Family; Amidase; 2-Amino-3-Carboxymuconate-6-Semialdehyde Decarboxylase; 2-Amino-3-Carboxylmuconate-6-Semialdehyde Decarboxylase; Tryptophan 2 3-Dioxygenase; O-Pyrocatechuate Decarboxylase; 2-Amino-3-Carboxymuconate-6- Semialdehyde Decarboxylase; Amidohydrolase/Decarboxylase; Metal-Dependent Hydrolase; Hydrolase; 2 3-Dihydroxybenzoic Acid Decarboxylase; Barh Protein; TIM-Barrel Fold Metal-Dependent Hydrolase; Minocarboxymuconate-Semialdehyde Decarboxylase.; Metal-Dependent Amidohydrolase; 5-Carboxy-2-Hydroxymuconate-6-Semialdehyde Decarboxylase; 2-Amino-3-Carboxymuconate 6-Semialdehyde Decarboxylase; Amidohydrolase 2 Protein
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MRIIDADGHVAENSSLAIEAIQRWPEHVKPGRHGRLGLMIEGRNYPEDRGPGAGCPPEHGISDAPDINCRSAEGVLGDAD RDHIDTMVLYPSLGLCAPSLRDPEFAAGFARLYNRWVADYCAQSGGRLRGVAVTPIEHGQLAIDVMREAKDLGLVATLVP PALQSRNLDHPDLDPFYAAAVELEMPLGVHGAPGIHLPKIGVDRFTNYIQVHCISFPFDQMTAMTAMVSGGVFERHPKLR VAFLEAGAGWVPFFIDRLHEHYEKRGDWVERGWRRDPHEYLKAGNIFVTCEPEEPILPGVIDVLGADFIMFASDYPHWDG EWPESTKHLRTRADISEEAREKIGGLNAQRFYNLN
Sequences:
>Translated_355_residues MRIIDADGHVAENSSLAIEAIQRWPEHVKPGRHGRLGLMIEGRNYPEDRGPGAGCPPEHGISDAPDINCRSAEGVLGDAD RDHIDTMVLYPSLGLCAPSLRDPEFAAGFARLYNRWVADYCAQSGGRLRGVAVTPIEHGQLAIDVMREAKDLGLVATLVP PALQSRNLDHPDLDPFYAAAVELEMPLGVHGAPGIHLPKIGVDRFTNYIQVHCISFPFDQMTAMTAMVSGGVFERHPKLR VAFLEAGAGWVPFFIDRLHEHYEKRGDWVERGWRRDPHEYLKAGNIFVTCEPEEPILPGVIDVLGADFIMFASDYPHWDG EWPESTKHLRTRADISEEAREKIGGLNAQRFYNLN >Mature_355_residues MRIIDADGHVAENSSLAIEAIQRWPEHVKPGRHGRLGLMIEGRNYPEDRGPGAGCPPEHGISDAPDINCRSAEGVLGDAD RDHIDTMVLYPSLGLCAPSLRDPEFAAGFARLYNRWVADYCAQSGGRLRGVAVTPIEHGQLAIDVMREAKDLGLVATLVP PALQSRNLDHPDLDPFYAAAVELEMPLGVHGAPGIHLPKIGVDRFTNYIQVHCISFPFDQMTAMTAMVSGGVFERHPKLR VAFLEAGAGWVPFFIDRLHEHYEKRGDWVERGWRRDPHEYLKAGNIFVTCEPEEPILPGVIDVLGADFIMFASDYPHWDG EWPESTKHLRTRADISEEAREKIGGLNAQRFYNLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI109715856, Length=290, Percent_Identity=26.8965517241379, Blast_Score=93, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39497; Mature: 39497
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIIDADGHVAENSSLAIEAIQRWPEHVKPGRHGRLGLMIEGRNYPEDRGPGAGCPPEHG CEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC ISDAPDINCRSAEGVLGDADRDHIDTMVLYPSLGLCAPSLRDPEFAAGFARLYNRWVADY CCCCCCCCCCCCCCCCCCCCCHHHCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH CAQSGGRLRGVAVTPIEHGQLAIDVMREAKDLGLVATLVPPALQSRNLDHPDLDPFYAAA HHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCEEEHHCCHHHHHCCCCCCCCCHHHHEE VELEMPLGVHGAPGIHLPKIGVDRFTNYIQVHCISFPFDQMTAMTAMVSGGVFERHPKLR EEEECCCCCCCCCCCCCCCCCHHHHCCEEEEEEEECCHHHHHHHHHHHHCCCHHCCCCEE VAFLEAGAGWVPFFIDRLHEHYEKRGDWVERGWRRDPHEYLKAGNIFVTCEPEEPILPGV EEEEECCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHCCCEEEEECCCCCCCHHH IDVLGADFIMFASDYPHWDGEWPESTKHLRTRADISEEAREKIGGLNAQRFYNLN HHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCHHHEECCC >Mature Secondary Structure MRIIDADGHVAENSSLAIEAIQRWPEHVKPGRHGRLGLMIEGRNYPEDRGPGAGCPPEHG CEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC ISDAPDINCRSAEGVLGDADRDHIDTMVLYPSLGLCAPSLRDPEFAAGFARLYNRWVADY CCCCCCCCCCCCCCCCCCCCCHHHCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH CAQSGGRLRGVAVTPIEHGQLAIDVMREAKDLGLVATLVPPALQSRNLDHPDLDPFYAAA HHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCEEEHHCCHHHHHCCCCCCCCCHHHHEE VELEMPLGVHGAPGIHLPKIGVDRFTNYIQVHCISFPFDQMTAMTAMVSGGVFERHPKLR EEEECCCCCCCCCCCCCCCCCHHHHCCEEEEEEEECCHHHHHHHHHHHHCCCHHCCCCEE VAFLEAGAGWVPFFIDRLHEHYEKRGDWVERGWRRDPHEYLKAGNIFVTCEPEEPILPGV EEEEECCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHCCCEEEEECCCCCCCHHH IDVLGADFIMFASDYPHWDGEWPESTKHLRTRADISEEAREKIGGLNAQRFYNLN HHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA