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The map label for this gene is 41407717

Identifier: 41407717

GI number: 41407717

Start: 1772801

End: 1774210

Strand: Direct

Name: 41407717

Synonym: MAP1619

Alternate gene names: NA

Gene position: 1772801-1774210 (Clockwise)

Preceding gene: 41407715

Following gene: 41407718

Centisome position: 36.71

GC content: 68.87

Gene sequence:

>1410_bases
ATGCGTTCGATCATCGGCCGCGAGGACATCCAGGACGACTATGACGTCCTGCGCGCCGTGGTCGCACGCATCCAGCGGCA
TTCCTACGATGCGCTGACCAACTCGGAACGCATCCGGCTGCTCGAGGTCCTCGAACACCAGACGCGCCGACTTCAAGTTC
CCGGTCACCAACTGATCAACCAGATCGAGCAGGACGCCACGCCGGCCGAGATCGGCGGCAAACTCGCCCACCTGCTGGCC
GACCGATTGCTCATCACCCGCGCCGAGGCCGCCCGCCGCATCGACGACGCCCGAGATCTCGGCGTCCGGCGCACCCTGAC
CGGCGAGCCGTTGCCGCCACGGTATGCGGCCACCGCCGCCGCCCAGCGGGACGGGCGCATCGGCGCCTCGCACGTCGCGG
TCATCCGCCGCTTCTTCGACCAGTTGCCATGCTGGGTGGACGCTCCCACCCGGGACGCCGCCGAGGCCGACCTGGCCCGC
TGGGCCGGCGAGCACCGCCCCGAAAGCCTGCGCAAGGTGGCCGACCGGATCGCCTGCTACCTCAATCCCGACGGCGTGTT
CCACGACGAGGATCGGTTGCGTCACCGCGGACTGACCCTGGGCGCCCAACAACCCGACGGCATGTCGCAACTGCGCGGCT
GGTTGACGCCCGAGGCCCGGGCGACCATCGAGGCCGTGCTGGCCAAACTGGCCGCGGCGGGCATGTGCAACCCCGACGAT
CCAGCACCCGTCGTCGACGGGCAGCCCGGCCAGGAGGCAATCCAGCGCGACAGCCGCAGCGCGGCCCAGCGCAACCACGA
CGGCCTCAACGCCGCCCTTCGTGCGCTGCTGGCCGGCGGAAAGCTGGGGCAGCACAACGGGTTACCAGCATCGATCATCG
TCACCACCACCCTGCGGGACCTCGAGTCCGCGGCCGGTAAGGGGCTGACGGGCGGCGGCACCCTGCTGCCGATGTCCGAT
GTGATCCGCCTGGCCCGCCACGCCCACCATTACCTCGCCGTCTTCGACAACGGCAAACCGCTGGCGCTGTACCACACAAA
ACGCCTGGCCTCGCCGGGGCAGCGAATTGTCTTGTACGCCAAGGACCGTGGCTGTTCACACCCGGGCTGCGACGTTTCGG
GCTATTCCTGCGAAGTCCATCATGTCACCGGTTACGCCAAATGCGGCCGCACCGACATCGACCAACTGACCTTCGCCTGC
GGCGGCCATCACCCGCTGGCCGAGCAAGGCTGGATCACCCGCAAGAACGGCCGAGGCGAGACCGAATGGATCCCACCACC
GCATCTCGACCACGGCCGGCCGCGGACCAATGCCTTCCATCACCCCGAGAAGCTGGTCGCGGACAGCGATAACGACACCG
GCGACAACACGTCCGACGCCCCCGACGACCCGCAACCGCCGATCCCTTGA

Upstream 100 bases:

>100_bases
CGGAGCGCACTGACGTGGCCAGCGGGTCCTGACCTGCGTTTTGGCACTACGGCCCGTCGCCATCGGCTGGCTTGTCGGCC
GGTCGAGCTACCATTCGCAC

Downstream 100 bases:

>100_bases
TCCGGCGCCGAGCGACCGGGTAGCGTAGTGCTGCAATTACGAAACTATGCGTAGCGTAATTGGGGCTACGGGACCATCAC
CTATCCGACCATTACCTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MRSIIGREDIQDDYDVLRAVVARIQRHSYDALTNSERIRLLEVLEHQTRRLQVPGHQLINQIEQDATPAEIGGKLAHLLA
DRLLITRAEAARRIDDARDLGVRRTLTGEPLPPRYAATAAAQRDGRIGASHVAVIRRFFDQLPCWVDAPTRDAAEADLAR
WAGEHRPESLRKVADRIACYLNPDGVFHDEDRLRHRGLTLGAQQPDGMSQLRGWLTPEARATIEAVLAKLAAAGMCNPDD
PAPVVDGQPGQEAIQRDSRSAAQRNHDGLNAALRALLAGGKLGQHNGLPASIIVTTTLRDLESAAGKGLTGGGTLLPMSD
VIRLARHAHHYLAVFDNGKPLALYHTKRLASPGQRIVLYAKDRGCSHPGCDVSGYSCEVHHVTGYAKCGRTDIDQLTFAC
GGHHPLAEQGWITRKNGRGETEWIPPPHLDHGRPRTNAFHHPEKLVADSDNDTGDNTSDAPDDPQPPIP

Sequences:

>Translated_469_residues
MRSIIGREDIQDDYDVLRAVVARIQRHSYDALTNSERIRLLEVLEHQTRRLQVPGHQLINQIEQDATPAEIGGKLAHLLA
DRLLITRAEAARRIDDARDLGVRRTLTGEPLPPRYAATAAAQRDGRIGASHVAVIRRFFDQLPCWVDAPTRDAAEADLAR
WAGEHRPESLRKVADRIACYLNPDGVFHDEDRLRHRGLTLGAQQPDGMSQLRGWLTPEARATIEAVLAKLAAAGMCNPDD
PAPVVDGQPGQEAIQRDSRSAAQRNHDGLNAALRALLAGGKLGQHNGLPASIIVTTTLRDLESAAGKGLTGGGTLLPMSD
VIRLARHAHHYLAVFDNGKPLALYHTKRLASPGQRIVLYAKDRGCSHPGCDVSGYSCEVHHVTGYAKCGRTDIDQLTFAC
GGHHPLAEQGWITRKNGRGETEWIPPPHLDHGRPRTNAFHHPEKLVADSDNDTGDNTSDAPDDPQPPIP
>Mature_469_residues
MRSIIGREDIQDDYDVLRAVVARIQRHSYDALTNSERIRLLEVLEHQTRRLQVPGHQLINQIEQDATPAEIGGKLAHLLA
DRLLITRAEAARRIDDARDLGVRRTLTGEPLPPRYAATAAAQRDGRIGASHVAVIRRFFDQLPCWVDAPTRDAAEADLAR
WAGEHRPESLRKVADRIACYLNPDGVFHDEDRLRHRGLTLGAQQPDGMSQLRGWLTPEARATIEAVLAKLAAAGMCNPDD
PAPVVDGQPGQEAIQRDSRSAAQRNHDGLNAALRALLAGGKLGQHNGLPASIIVTTTLRDLESAAGKGLTGGGTLLPMSD
VIRLARHAHHYLAVFDNGKPLALYHTKRLASPGQRIVLYAKDRGCSHPGCDVSGYSCEVHHVTGYAKCGRTDIDQLTFAC
GGHHPLAEQGWITRKNGRGETEWIPPPHLDHGRPRTNAFHHPEKLVADSDNDTGDNTSDAPDDPQPPIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Rv1128c/1148c/1588c/1702c/1945/3466 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003870
- InterPro:   IPR003615 [H]

Pfam domain/function: PF02720 DUF222 [H]

EC number: NA

Molecular weight: Translated: 51286; Mature: 51286

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSIIGREDIQDDYDVLRAVVARIQRHSYDALTNSERIRLLEVLEHQTRRLQVPGHQLIN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEECCCHHHHHH
QIEQDATPAEIGGKLAHLLADRLLITRAEAARRIDDARDLGVRRTLTGEPLPPRYAATAA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHH
AQRDGRIGASHVAVIRRFFDQLPCWVDAPTRDAAEADLARWAGEHRPESLRKVADRIACY
HHCCCCCCHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHEEE
LNPDGVFHDEDRLRHRGLTLGAQQPDGMSQLRGWLTPEARATIEAVLAKLAAAGMCNPDD
ECCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC
PAPVVDGQPGQEAIQRDSRSAAQRNHDGLNAALRALLAGGKLGQHNGLPASIIVTTTLRD
CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHH
LESAAGKGLTGGGTLLPMSDVIRLARHAHHYLAVFDNGKPLALYHTKRLASPGQRIVLYA
HHHHHCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCEEEEEEHHHHCCCCCEEEEEE
KDRGCSHPGCDVSGYSCEVHHVTGYAKCGRTDIDQLTFACGGHHPLAEQGWITRKNGRGE
CCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCHHHHHHHCCCCCCCCCCCCEEECCCCCC
TEWIPPPHLDHGRPRTNAFHHPEKLVADSDNDTGDNTSDAPDDPQPPIP
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRSIIGREDIQDDYDVLRAVVARIQRHSYDALTNSERIRLLEVLEHQTRRLQVPGHQLIN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEECCCHHHHHH
QIEQDATPAEIGGKLAHLLADRLLITRAEAARRIDDARDLGVRRTLTGEPLPPRYAATAA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHH
AQRDGRIGASHVAVIRRFFDQLPCWVDAPTRDAAEADLARWAGEHRPESLRKVADRIACY
HHCCCCCCHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHEEE
LNPDGVFHDEDRLRHRGLTLGAQQPDGMSQLRGWLTPEARATIEAVLAKLAAAGMCNPDD
ECCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC
PAPVVDGQPGQEAIQRDSRSAAQRNHDGLNAALRALLAGGKLGQHNGLPASIIVTTTLRD
CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHH
LESAAGKGLTGGGTLLPMSDVIRLARHAHHYLAVFDNGKPLALYHTKRLASPGQRIVLYA
HHHHHCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCEEEEEEHHHHCCCCCEEEEEE
KDRGCSHPGCDVSGYSCEVHHVTGYAKCGRTDIDQLTFACGGHHPLAEQGWITRKNGRGE
CCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCHHHHHHHCCCCCCCCCCCCEEECCCCCC
TEWIPPPHLDHGRPRTNAFHHPEKLVADSDNDTGDNTSDAPDDPQPPIP
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]