Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41407714

Identifier: 41407714

GI number: 41407714

Start: 1770832

End: 1771146

Strand: Direct

Name: 41407714

Synonym: MAP1616

Alternate gene names: NA

Gene position: 1770832-1771146 (Clockwise)

Preceding gene: 41407713

Following gene: 41407715

Centisome position: 36.66

GC content: 71.43

Gene sequence:

>315_bases
ATGAGCCCGGCCCCCCGTGAGCGCAGTCGGACCGCCGAGTCCGGCAAACCGCTGGTGCCTCGCTGGCTGCGGTTCGTGCT
GGCCTCGGATCGCGCCGGGTCGGCCTGGTACATCGGCACCGGGTTCTTCTTCGCGCCGGTGCTGGCGGTGCTCTCGCCCT
GGCCCGTCGTCACCGCCGTGCTGTGGGGTGTCATCGCCCTGGCCGGGCTGTGGCTGGGACTGCTGGGCATCGCGATGGCC
GTCGGGCTGGCCCGGATAATGCGCTCCGGGGCCGAAATCCCCGAGGACTACTGGCGCTCCCTGGTGCACTACTAG

Upstream 100 bases:

>100_bases
AGGCCGGGCTGCCCATGCTGTGCCTGGGCGATCGCGGGTGGCAAGAAGGATGGTTCACCGGGGCAGGGTTCTTCCCGCCC
AGCGGATGATCGGCGCCGCC

Downstream 100 bases:

>100_bases
GCCCACTGTCGGCCCGTTGCCTTTACCGACGGGCCCTCCGGCGCCGGCGAGAAATGACCCCCCGACCCGTCTAGAGTTCC
GTCTAGGGTCAGGGCAACGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MSPAPRERSRTAESGKPLVPRWLRFVLASDRAGSAWYIGTGFFFAPVLAVLSPWPVVTAVLWGVIALAGLWLGLLGIAMA
VGLARIMRSGAEIPEDYWRSLVHY

Sequences:

>Translated_104_residues
MSPAPRERSRTAESGKPLVPRWLRFVLASDRAGSAWYIGTGFFFAPVLAVLSPWPVVTAVLWGVIALAGLWLGLLGIAMA
VGLARIMRSGAEIPEDYWRSLVHY
>Mature_103_residues
SPAPRERSRTAESGKPLVPRWLRFVLASDRAGSAWYIGTGFFFAPVLAVLSPWPVVTAVLWGVIALAGLWLGLLGIAMAV
GLARIMRSGAEIPEDYWRSLVHY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11396; Mature: 11264

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPAPRERSRTAESGKPLVPRWLRFVLASDRAGSAWYIGTGFFFAPVLAVLSPWPVVTAV
CCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCHHHHHHH
LWGVIALAGLWLGLLGIAMAVGLARIMRSGAEIPEDYWRSLVHY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
SPAPRERSRTAESGKPLVPRWLRFVLASDRAGSAWYIGTGFFFAPVLAVLSPWPVVTAV
CCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCHHHHHHH
LWGVIALAGLWLGLLGIAMAVGLARIMRSGAEIPEDYWRSLVHY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA