| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407676
Identifier: 41407676
GI number: 41407676
Start: 1735307
End: 1737430
Strand: Direct
Name: 41407676
Synonym: MAP1578
Alternate gene names: NA
Gene position: 1735307-1737430 (Clockwise)
Preceding gene: 41407675
Following gene: 41407684
Centisome position: 35.93
GC content: 73.78
Gene sequence:
>2124_bases GTGCACATCCTGGTTACCGACGCCACCGGCGCACTCGGGCGGCTGGTCGCTGGGCAGCTGATCGCGGCCGGGCACACCGT CACCGGAATTGCTGAGCTGCCGCACCCCTGCCTGGACCGCAACGTCGAATTCGTTTGCGCGCCGCTGCGCGACCGGGTGT TGCGCGAGCTGACCGACGAGGCCGACGCGGTCATCCACCTGGCCCCGATCGACCCCACCGCGCCCGGCAACGCCGCCATG GACGGGCTGGCGCGCGTCACCGACGCCGCCGCCCGGGCCGGGTCCCGGCTGTTGTTCGTGTCGCAGGCCGCCGGCCGGCC CGAGCTGTATCGACCGGCCGAGGACCTGGTGGCCTCGAGCTGGGGGCCCAGCGTGGTGGTCCGGATCGCGCCGCCGGTCG GTCGTCAACTCGACTGGATGGTGTGCCGCACGGTGGCCACCGTGCTGCGCACCAAGGTGTCGGCGCAGCCGATGCGGGTG CTGCACCTCGACGACCTGATGCGCTTTTTGGTGACGGCCCTCGACACCGACCGCACCGGCGTGGTGGACCTGGCCAGCCC GGACACCGTCAACCTGGTCACCGCCTGGCGGATGCTGCGCGCCACCGACCCCCGTTCCCGGCTGCACCGGGTGCGCAGCT GGTCGCAGCTGATTCCGGATCTCAATGTTGCTGCTGCGCAAGAGGATTGGCTGTTCGAGTTCGGCTGGCACGCGCTGGAC GCGGTCGCCGACACCGCGCGTGGGCTGGTCGGGCGCCGGCTGGACACCGCGGGCGCGATCAATCACGGCGCCCAGCTCGC GCTGCCCGTCGAGGTGCTGCCGCAGCGGGCGGGCAACGGCGCGCACAGCGCGGCGCCCGAAGGCGTGGAAGGCGAATTCG ACGACCGGATCGATCCGCGGTTCCCGGTGTTTTCGGCCACTGCGCTCACCGAGGCGTTGCCCGGGCCGCTCACCCCGATC ACGCTCGACGTCCAACTGAGCGGGCTGCGCACCGCGAGCCGGGTGTTGGGCCGGGTGCTCGCGCTGGGCGGCGCGGTCGG CGAGGAATGGGACAGCAGGGCCATCGCGGTGTTCGGCCACCGGCCCTATGTCGGGGTGTCGGTCAACATGGTCGCCGCCA CCCAGCTGCCCGGCTGGGACCAGGACGCCGTCGCCCGCGACGCCCTGGTGGGCCGGCCCCAGGTCGGCGATCCGCTGCCG TTCGGTGAGCCGGCGTTGGCGGGCGGGGCGCTCGGCTCGATCGCCAAGGCGGTGGCCGCGGGACGGTCGGTGGCGCTGCT GCGGCACTTGCGGGCGAACACCCGCGACTACTGCGCCGCCGCCGTCGCCGAGCAGGTGGACGCCGCCCAACTGGCCTTGC TGCCGCAGGCCGCGCTGGAGGTGCGGCTGCGGCTGTTGCGCGACCGCATCCACCAGGGCTGGATCCTCAACGCGCTGTGG CTGCTCGACACCGGGATCACGGCGGCGACGCTGGTGCGCAGCCAGGCCGGGCAGAGTGTGCCCGGCCTCGGCATGATCAC CGAAAGCGGCCTGGTGGCAGCCGAAACCGCCGAGCTGGCGGCGATGTTGGCGGCCGACCCGCCGTTGTGTGCGCTGGCCG CCGACGGCAACCTCGCCAGCATCCGCGCGCTGGCGCCGAAGACCGCCGCCGCCGTGGACGCCGCGGTGGCGCGGATTGGA CACCGCGGGCCCGGGGACGCCGAGCTGGCCAGCCAGACGTTCGGCGACGACCCGGCGATGCTGCTGAGCGCCGCCGCCGC CGCGGCGCCCGCCGAGCCCGCCGCGCCGGCGACGCTGGCCGAGCGGCTGGCGGCCAACGCCCGCGGCTCTAAGGAGCTGG CCCACGACGCCACCATGCGGTTCACCCACGAGCTCCGAATGACGTTGCGCGCCTTGGGATCTCTGCGGGTGGAGGCGGAT CTGATCGACGCCGTCGACGACGTGTACTACCTGACCTGCAACGAGCTGGTGACCATGCCCGGCGATGCCCGGCTGCGGAT CAAGCGCCGCCGCACCGAGCGGGAGCGGTTGCAGGTGCAATGCCCACCCGAGGTCATCGACGGCCGGTGGACGCCGCCGC AGCACTGCGCCGAGGGATCGCCGGCCCGGCGCCCCGCGGGCTGA
Upstream 100 bases:
>100_bases CGTCACCGCCGGTCATCGAACCGTTACCGGACCGACGGTCGCGTAGCCAGTGCCTATTTGCCTATTGTTGAGTGCTGAGG GTTGGGGGAGGTGAGCCCAG
Downstream 100 bases:
>100_bases CCCGTCAACCGAGCAGCTCGCCCAGCGGTGCGCCGGGATCACCGAGCCGGTCGGCGTCGATGGGCGCCCGGGACCGGATC AGTGCCTTGACGTCGTCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 707; Mature: 707
Protein sequence:
>707_residues MHILVTDATGALGRLVAGQLIAAGHTVTGIAELPHPCLDRNVEFVCAPLRDRVLRELTDEADAVIHLAPIDPTAPGNAAM DGLARVTDAAARAGSRLLFVSQAAGRPELYRPAEDLVASSWGPSVVVRIAPPVGRQLDWMVCRTVATVLRTKVSAQPMRV LHLDDLMRFLVTALDTDRTGVVDLASPDTVNLVTAWRMLRATDPRSRLHRVRSWSQLIPDLNVAAAQEDWLFEFGWHALD AVADTARGLVGRRLDTAGAINHGAQLALPVEVLPQRAGNGAHSAAPEGVEGEFDDRIDPRFPVFSATALTEALPGPLTPI TLDVQLSGLRTASRVLGRVLALGGAVGEEWDSRAIAVFGHRPYVGVSVNMVAATQLPGWDQDAVARDALVGRPQVGDPLP FGEPALAGGALGSIAKAVAAGRSVALLRHLRANTRDYCAAAVAEQVDAAQLALLPQAALEVRLRLLRDRIHQGWILNALW LLDTGITAATLVRSQAGQSVPGLGMITESGLVAAETAELAAMLAADPPLCALAADGNLASIRALAPKTAAAVDAAVARIG HRGPGDAELASQTFGDDPAMLLSAAAAAAPAEPAAPATLAERLAANARGSKELAHDATMRFTHELRMTLRALGSLRVEAD LIDAVDDVYYLTCNELVTMPGDARLRIKRRRTERERLQVQCPPEVIDGRWTPPQHCAEGSPARRPAG
Sequences:
>Translated_707_residues MHILVTDATGALGRLVAGQLIAAGHTVTGIAELPHPCLDRNVEFVCAPLRDRVLRELTDEADAVIHLAPIDPTAPGNAAM DGLARVTDAAARAGSRLLFVSQAAGRPELYRPAEDLVASSWGPSVVVRIAPPVGRQLDWMVCRTVATVLRTKVSAQPMRV LHLDDLMRFLVTALDTDRTGVVDLASPDTVNLVTAWRMLRATDPRSRLHRVRSWSQLIPDLNVAAAQEDWLFEFGWHALD AVADTARGLVGRRLDTAGAINHGAQLALPVEVLPQRAGNGAHSAAPEGVEGEFDDRIDPRFPVFSATALTEALPGPLTPI TLDVQLSGLRTASRVLGRVLALGGAVGEEWDSRAIAVFGHRPYVGVSVNMVAATQLPGWDQDAVARDALVGRPQVGDPLP FGEPALAGGALGSIAKAVAAGRSVALLRHLRANTRDYCAAAVAEQVDAAQLALLPQAALEVRLRLLRDRIHQGWILNALW LLDTGITAATLVRSQAGQSVPGLGMITESGLVAAETAELAAMLAADPPLCALAADGNLASIRALAPKTAAAVDAAVARIG HRGPGDAELASQTFGDDPAMLLSAAAAAAPAEPAAPATLAERLAANARGSKELAHDATMRFTHELRMTLRALGSLRVEAD LIDAVDDVYYLTCNELVTMPGDARLRIKRRRTERERLQVQCPPEVIDGRWTPPQHCAEGSPARRPAG >Mature_707_residues MHILVTDATGALGRLVAGQLIAAGHTVTGIAELPHPCLDRNVEFVCAPLRDRVLRELTDEADAVIHLAPIDPTAPGNAAM DGLARVTDAAARAGSRLLFVSQAAGRPELYRPAEDLVASSWGPSVVVRIAPPVGRQLDWMVCRTVATVLRTKVSAQPMRV LHLDDLMRFLVTALDTDRTGVVDLASPDTVNLVTAWRMLRATDPRSRLHRVRSWSQLIPDLNVAAAQEDWLFEFGWHALD AVADTARGLVGRRLDTAGAINHGAQLALPVEVLPQRAGNGAHSAAPEGVEGEFDDRIDPRFPVFSATALTEALPGPLTPI TLDVQLSGLRTASRVLGRVLALGGAVGEEWDSRAIAVFGHRPYVGVSVNMVAATQLPGWDQDAVARDALVGRPQVGDPLP FGEPALAGGALGSIAKAVAAGRSVALLRHLRANTRDYCAAAVAEQVDAAQLALLPQAALEVRLRLLRDRIHQGWILNALW LLDTGITAATLVRSQAGQSVPGLGMITESGLVAAETAELAAMLAADPPLCALAADGNLASIRALAPKTAAAVDAAVARIG HRGPGDAELASQTFGDDPAMLLSAAAAAAPAEPAAPATLAERLAANARGSKELAHDATMRFTHELRMTLRALGSLRVEAD LIDAVDDVYYLTCNELVTMPGDARLRIKRRRTERERLQVQCPPEVIDGRWTPPQHCAEGSPARRPAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001509 - InterPro: IPR016040 - InterPro: IPR008279 [H]
Pfam domain/function: PF01370 Epimerase; PF00391 PEP-utilizers [H]
EC number: NA
Molecular weight: Translated: 74781; Mature: 74781
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHILVTDATGALGRLVAGQLIAAGHTVTGIAELPHPCLDRNVEFVCAPLRDRVLRELTDE CEEEEECCCCHHHHHHHHHHHHCCCCEECHHHCCCHHHCCCCEEEECCHHHHHHHHHHCC ADAVIHLAPIDPTAPGNAAMDGLARVTDAAARAGSRLLFVSQAAGRPELYRPAEDLVASS CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHCC WGPSVVVRIAPPVGRQLDWMVCRTVATVLRTKVSAQPMRVLHLDDLMRFLVTALDTDRTG CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCC VVDLASPDTVNLVTAWRMLRATDPRSRLHRVRSWSQLIPDLNVAAAQEDWLFEFGWHALD EEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH AVADTARGLVGRRLDTAGAINHGAQLALPVEVLPQRAGNGAHSAAPEGVEGEFDDRIDPR HHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC FPVFSATALTEALPGPLTPITLDVQLSGLRTASRVLGRVLALGGAVGEEWDSRAIAVFGH CCCEEHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECC RPYVGVSVNMVAATQLPGWDQDAVARDALVGRPQVGDPLPFGEPALAGGALGSIAKAVAA CCEEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC GRSVALLRHLRANTRDYCAAAVAEQVDAAQLALLPQAALEVRLRLLRDRIHQGWILNALW CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LLDTGITAATLVRSQAGQSVPGLGMITESGLVAAETAELAAMLAADPPLCALAADGNLAS HHHCCCHHHHHHHHHCCCCCCCCCEEECCCCEEHHHHHHHHHHHCCCCEEEEECCCCHHH IRALAPKTAAAVDAAVARIGHRGPGDAELASQTFGDDPAMLLSAAAAAAPAEPAAPATLA HHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHH ERLAANARGSKELAHDATMRFTHELRMTLRALGSLRVEADLIDAVDDVYYLTCNELVTMP HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEECCEEECC GDARLRIKRRRTERERLQVQCPPEVIDGRWTPPQHCAEGSPARRPAG CCCEEEHHHHHCHHHCEEEECCHHHHCCCCCCHHHHCCCCCCCCCCC >Mature Secondary Structure MHILVTDATGALGRLVAGQLIAAGHTVTGIAELPHPCLDRNVEFVCAPLRDRVLRELTDE CEEEEECCCCHHHHHHHHHHHHCCCCEECHHHCCCHHHCCCCEEEECCHHHHHHHHHHCC ADAVIHLAPIDPTAPGNAAMDGLARVTDAAARAGSRLLFVSQAAGRPELYRPAEDLVASS CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHCC WGPSVVVRIAPPVGRQLDWMVCRTVATVLRTKVSAQPMRVLHLDDLMRFLVTALDTDRTG CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCC VVDLASPDTVNLVTAWRMLRATDPRSRLHRVRSWSQLIPDLNVAAAQEDWLFEFGWHALD EEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH AVADTARGLVGRRLDTAGAINHGAQLALPVEVLPQRAGNGAHSAAPEGVEGEFDDRIDPR HHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC FPVFSATALTEALPGPLTPITLDVQLSGLRTASRVLGRVLALGGAVGEEWDSRAIAVFGH CCCEEHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECC RPYVGVSVNMVAATQLPGWDQDAVARDALVGRPQVGDPLPFGEPALAGGALGSIAKAVAA CCEEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC GRSVALLRHLRANTRDYCAAAVAEQVDAAQLALLPQAALEVRLRLLRDRIHQGWILNALW CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LLDTGITAATLVRSQAGQSVPGLGMITESGLVAAETAELAAMLAADPPLCALAADGNLAS HHHCCCHHHHHHHHHCCCCCCCCCEEECCCCEEHHHHHHHHHHHCCCCEEEEECCCCHHH IRALAPKTAAAVDAAVARIGHRGPGDAELASQTFGDDPAMLLSAAAAAAPAEPAAPATLA HHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHH ERLAANARGSKELAHDATMRFTHELRMTLRALGSLRVEADLIDAVDDVYYLTCNELVTMP HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEECCEEECC GDARLRIKRRRTERERLQVQCPPEVIDGRWTPPQHCAEGSPARRPAG CCCEEEHHHHHCHHHCEEEECCHHHHCCCCCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]