Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41407676

Identifier: 41407676

GI number: 41407676

Start: 1735307

End: 1737430

Strand: Direct

Name: 41407676

Synonym: MAP1578

Alternate gene names: NA

Gene position: 1735307-1737430 (Clockwise)

Preceding gene: 41407675

Following gene: 41407684

Centisome position: 35.93

GC content: 73.78

Gene sequence:

>2124_bases
GTGCACATCCTGGTTACCGACGCCACCGGCGCACTCGGGCGGCTGGTCGCTGGGCAGCTGATCGCGGCCGGGCACACCGT
CACCGGAATTGCTGAGCTGCCGCACCCCTGCCTGGACCGCAACGTCGAATTCGTTTGCGCGCCGCTGCGCGACCGGGTGT
TGCGCGAGCTGACCGACGAGGCCGACGCGGTCATCCACCTGGCCCCGATCGACCCCACCGCGCCCGGCAACGCCGCCATG
GACGGGCTGGCGCGCGTCACCGACGCCGCCGCCCGGGCCGGGTCCCGGCTGTTGTTCGTGTCGCAGGCCGCCGGCCGGCC
CGAGCTGTATCGACCGGCCGAGGACCTGGTGGCCTCGAGCTGGGGGCCCAGCGTGGTGGTCCGGATCGCGCCGCCGGTCG
GTCGTCAACTCGACTGGATGGTGTGCCGCACGGTGGCCACCGTGCTGCGCACCAAGGTGTCGGCGCAGCCGATGCGGGTG
CTGCACCTCGACGACCTGATGCGCTTTTTGGTGACGGCCCTCGACACCGACCGCACCGGCGTGGTGGACCTGGCCAGCCC
GGACACCGTCAACCTGGTCACCGCCTGGCGGATGCTGCGCGCCACCGACCCCCGTTCCCGGCTGCACCGGGTGCGCAGCT
GGTCGCAGCTGATTCCGGATCTCAATGTTGCTGCTGCGCAAGAGGATTGGCTGTTCGAGTTCGGCTGGCACGCGCTGGAC
GCGGTCGCCGACACCGCGCGTGGGCTGGTCGGGCGCCGGCTGGACACCGCGGGCGCGATCAATCACGGCGCCCAGCTCGC
GCTGCCCGTCGAGGTGCTGCCGCAGCGGGCGGGCAACGGCGCGCACAGCGCGGCGCCCGAAGGCGTGGAAGGCGAATTCG
ACGACCGGATCGATCCGCGGTTCCCGGTGTTTTCGGCCACTGCGCTCACCGAGGCGTTGCCCGGGCCGCTCACCCCGATC
ACGCTCGACGTCCAACTGAGCGGGCTGCGCACCGCGAGCCGGGTGTTGGGCCGGGTGCTCGCGCTGGGCGGCGCGGTCGG
CGAGGAATGGGACAGCAGGGCCATCGCGGTGTTCGGCCACCGGCCCTATGTCGGGGTGTCGGTCAACATGGTCGCCGCCA
CCCAGCTGCCCGGCTGGGACCAGGACGCCGTCGCCCGCGACGCCCTGGTGGGCCGGCCCCAGGTCGGCGATCCGCTGCCG
TTCGGTGAGCCGGCGTTGGCGGGCGGGGCGCTCGGCTCGATCGCCAAGGCGGTGGCCGCGGGACGGTCGGTGGCGCTGCT
GCGGCACTTGCGGGCGAACACCCGCGACTACTGCGCCGCCGCCGTCGCCGAGCAGGTGGACGCCGCCCAACTGGCCTTGC
TGCCGCAGGCCGCGCTGGAGGTGCGGCTGCGGCTGTTGCGCGACCGCATCCACCAGGGCTGGATCCTCAACGCGCTGTGG
CTGCTCGACACCGGGATCACGGCGGCGACGCTGGTGCGCAGCCAGGCCGGGCAGAGTGTGCCCGGCCTCGGCATGATCAC
CGAAAGCGGCCTGGTGGCAGCCGAAACCGCCGAGCTGGCGGCGATGTTGGCGGCCGACCCGCCGTTGTGTGCGCTGGCCG
CCGACGGCAACCTCGCCAGCATCCGCGCGCTGGCGCCGAAGACCGCCGCCGCCGTGGACGCCGCGGTGGCGCGGATTGGA
CACCGCGGGCCCGGGGACGCCGAGCTGGCCAGCCAGACGTTCGGCGACGACCCGGCGATGCTGCTGAGCGCCGCCGCCGC
CGCGGCGCCCGCCGAGCCCGCCGCGCCGGCGACGCTGGCCGAGCGGCTGGCGGCCAACGCCCGCGGCTCTAAGGAGCTGG
CCCACGACGCCACCATGCGGTTCACCCACGAGCTCCGAATGACGTTGCGCGCCTTGGGATCTCTGCGGGTGGAGGCGGAT
CTGATCGACGCCGTCGACGACGTGTACTACCTGACCTGCAACGAGCTGGTGACCATGCCCGGCGATGCCCGGCTGCGGAT
CAAGCGCCGCCGCACCGAGCGGGAGCGGTTGCAGGTGCAATGCCCACCCGAGGTCATCGACGGCCGGTGGACGCCGCCGC
AGCACTGCGCCGAGGGATCGCCGGCCCGGCGCCCCGCGGGCTGA

Upstream 100 bases:

>100_bases
CGTCACCGCCGGTCATCGAACCGTTACCGGACCGACGGTCGCGTAGCCAGTGCCTATTTGCCTATTGTTGAGTGCTGAGG
GTTGGGGGAGGTGAGCCCAG

Downstream 100 bases:

>100_bases
CCCGTCAACCGAGCAGCTCGCCCAGCGGTGCGCCGGGATCACCGAGCCGGTCGGCGTCGATGGGCGCCCGGGACCGGATC
AGTGCCTTGACGTCGTCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 707; Mature: 707

Protein sequence:

>707_residues
MHILVTDATGALGRLVAGQLIAAGHTVTGIAELPHPCLDRNVEFVCAPLRDRVLRELTDEADAVIHLAPIDPTAPGNAAM
DGLARVTDAAARAGSRLLFVSQAAGRPELYRPAEDLVASSWGPSVVVRIAPPVGRQLDWMVCRTVATVLRTKVSAQPMRV
LHLDDLMRFLVTALDTDRTGVVDLASPDTVNLVTAWRMLRATDPRSRLHRVRSWSQLIPDLNVAAAQEDWLFEFGWHALD
AVADTARGLVGRRLDTAGAINHGAQLALPVEVLPQRAGNGAHSAAPEGVEGEFDDRIDPRFPVFSATALTEALPGPLTPI
TLDVQLSGLRTASRVLGRVLALGGAVGEEWDSRAIAVFGHRPYVGVSVNMVAATQLPGWDQDAVARDALVGRPQVGDPLP
FGEPALAGGALGSIAKAVAAGRSVALLRHLRANTRDYCAAAVAEQVDAAQLALLPQAALEVRLRLLRDRIHQGWILNALW
LLDTGITAATLVRSQAGQSVPGLGMITESGLVAAETAELAAMLAADPPLCALAADGNLASIRALAPKTAAAVDAAVARIG
HRGPGDAELASQTFGDDPAMLLSAAAAAAPAEPAAPATLAERLAANARGSKELAHDATMRFTHELRMTLRALGSLRVEAD
LIDAVDDVYYLTCNELVTMPGDARLRIKRRRTERERLQVQCPPEVIDGRWTPPQHCAEGSPARRPAG

Sequences:

>Translated_707_residues
MHILVTDATGALGRLVAGQLIAAGHTVTGIAELPHPCLDRNVEFVCAPLRDRVLRELTDEADAVIHLAPIDPTAPGNAAM
DGLARVTDAAARAGSRLLFVSQAAGRPELYRPAEDLVASSWGPSVVVRIAPPVGRQLDWMVCRTVATVLRTKVSAQPMRV
LHLDDLMRFLVTALDTDRTGVVDLASPDTVNLVTAWRMLRATDPRSRLHRVRSWSQLIPDLNVAAAQEDWLFEFGWHALD
AVADTARGLVGRRLDTAGAINHGAQLALPVEVLPQRAGNGAHSAAPEGVEGEFDDRIDPRFPVFSATALTEALPGPLTPI
TLDVQLSGLRTASRVLGRVLALGGAVGEEWDSRAIAVFGHRPYVGVSVNMVAATQLPGWDQDAVARDALVGRPQVGDPLP
FGEPALAGGALGSIAKAVAAGRSVALLRHLRANTRDYCAAAVAEQVDAAQLALLPQAALEVRLRLLRDRIHQGWILNALW
LLDTGITAATLVRSQAGQSVPGLGMITESGLVAAETAELAAMLAADPPLCALAADGNLASIRALAPKTAAAVDAAVARIG
HRGPGDAELASQTFGDDPAMLLSAAAAAAPAEPAAPATLAERLAANARGSKELAHDATMRFTHELRMTLRALGSLRVEAD
LIDAVDDVYYLTCNELVTMPGDARLRIKRRRTERERLQVQCPPEVIDGRWTPPQHCAEGSPARRPAG
>Mature_707_residues
MHILVTDATGALGRLVAGQLIAAGHTVTGIAELPHPCLDRNVEFVCAPLRDRVLRELTDEADAVIHLAPIDPTAPGNAAM
DGLARVTDAAARAGSRLLFVSQAAGRPELYRPAEDLVASSWGPSVVVRIAPPVGRQLDWMVCRTVATVLRTKVSAQPMRV
LHLDDLMRFLVTALDTDRTGVVDLASPDTVNLVTAWRMLRATDPRSRLHRVRSWSQLIPDLNVAAAQEDWLFEFGWHALD
AVADTARGLVGRRLDTAGAINHGAQLALPVEVLPQRAGNGAHSAAPEGVEGEFDDRIDPRFPVFSATALTEALPGPLTPI
TLDVQLSGLRTASRVLGRVLALGGAVGEEWDSRAIAVFGHRPYVGVSVNMVAATQLPGWDQDAVARDALVGRPQVGDPLP
FGEPALAGGALGSIAKAVAAGRSVALLRHLRANTRDYCAAAVAEQVDAAQLALLPQAALEVRLRLLRDRIHQGWILNALW
LLDTGITAATLVRSQAGQSVPGLGMITESGLVAAETAELAAMLAADPPLCALAADGNLASIRALAPKTAAAVDAAVARIG
HRGPGDAELASQTFGDDPAMLLSAAAAAAPAEPAAPATLAERLAANARGSKELAHDATMRFTHELRMTLRALGSLRVEAD
LIDAVDDVYYLTCNELVTMPGDARLRIKRRRTERERLQVQCPPEVIDGRWTPPQHCAEGSPARRPAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PEP-utilizing enzyme family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR008279 [H]

Pfam domain/function: PF01370 Epimerase; PF00391 PEP-utilizers [H]

EC number: NA

Molecular weight: Translated: 74781; Mature: 74781

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHILVTDATGALGRLVAGQLIAAGHTVTGIAELPHPCLDRNVEFVCAPLRDRVLRELTDE
CEEEEECCCCHHHHHHHHHHHHCCCCEECHHHCCCHHHCCCCEEEECCHHHHHHHHHHCC
ADAVIHLAPIDPTAPGNAAMDGLARVTDAAARAGSRLLFVSQAAGRPELYRPAEDLVASS
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHCC
WGPSVVVRIAPPVGRQLDWMVCRTVATVLRTKVSAQPMRVLHLDDLMRFLVTALDTDRTG
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCC
VVDLASPDTVNLVTAWRMLRATDPRSRLHRVRSWSQLIPDLNVAAAQEDWLFEFGWHALD
EEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
AVADTARGLVGRRLDTAGAINHGAQLALPVEVLPQRAGNGAHSAAPEGVEGEFDDRIDPR
HHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
FPVFSATALTEALPGPLTPITLDVQLSGLRTASRVLGRVLALGGAVGEEWDSRAIAVFGH
CCCEEHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECC
RPYVGVSVNMVAATQLPGWDQDAVARDALVGRPQVGDPLPFGEPALAGGALGSIAKAVAA
CCEEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC
GRSVALLRHLRANTRDYCAAAVAEQVDAAQLALLPQAALEVRLRLLRDRIHQGWILNALW
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LLDTGITAATLVRSQAGQSVPGLGMITESGLVAAETAELAAMLAADPPLCALAADGNLAS
HHHCCCHHHHHHHHHCCCCCCCCCEEECCCCEEHHHHHHHHHHHCCCCEEEEECCCCHHH
IRALAPKTAAAVDAAVARIGHRGPGDAELASQTFGDDPAMLLSAAAAAAPAEPAAPATLA
HHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHH
ERLAANARGSKELAHDATMRFTHELRMTLRALGSLRVEADLIDAVDDVYYLTCNELVTMP
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEECCEEECC
GDARLRIKRRRTERERLQVQCPPEVIDGRWTPPQHCAEGSPARRPAG
CCCEEEHHHHHCHHHCEEEECCHHHHCCCCCCHHHHCCCCCCCCCCC
>Mature Secondary Structure
MHILVTDATGALGRLVAGQLIAAGHTVTGIAELPHPCLDRNVEFVCAPLRDRVLRELTDE
CEEEEECCCCHHHHHHHHHHHHCCCCEECHHHCCCHHHCCCCEEEECCHHHHHHHHHHCC
ADAVIHLAPIDPTAPGNAAMDGLARVTDAAARAGSRLLFVSQAAGRPELYRPAEDLVASS
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHCC
WGPSVVVRIAPPVGRQLDWMVCRTVATVLRTKVSAQPMRVLHLDDLMRFLVTALDTDRTG
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCC
VVDLASPDTVNLVTAWRMLRATDPRSRLHRVRSWSQLIPDLNVAAAQEDWLFEFGWHALD
EEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
AVADTARGLVGRRLDTAGAINHGAQLALPVEVLPQRAGNGAHSAAPEGVEGEFDDRIDPR
HHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
FPVFSATALTEALPGPLTPITLDVQLSGLRTASRVLGRVLALGGAVGEEWDSRAIAVFGH
CCCEEHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECC
RPYVGVSVNMVAATQLPGWDQDAVARDALVGRPQVGDPLPFGEPALAGGALGSIAKAVAA
CCEEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC
GRSVALLRHLRANTRDYCAAAVAEQVDAAQLALLPQAALEVRLRLLRDRIHQGWILNALW
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LLDTGITAATLVRSQAGQSVPGLGMITESGLVAAETAELAAMLAADPPLCALAADGNLAS
HHHCCCHHHHHHHHHCCCCCCCCCEEECCCCEEHHHHHHHHHHHCCCCEEEEECCCCHHH
IRALAPKTAAAVDAAVARIGHRGPGDAELASQTFGDDPAMLLSAAAAAAPAEPAAPATLA
HHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHH
ERLAANARGSKELAHDATMRFTHELRMTLRALGSLRVEADLIDAVDDVYYLTCNELVTMP
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEECCEEECC
GDARLRIKRRRTERERLQVQCPPEVIDGRWTPPQHCAEGSPARRPAG
CCCEEEHHHHHCHHHCEEEECCHHHHCCCCCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]