| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407300
Identifier: 41407300
GI number: 41407300
Start: 1263086
End: 1263712
Strand: Direct
Name: 41407300
Synonym: MAP1202
Alternate gene names: NA
Gene position: 1263086-1263712 (Clockwise)
Preceding gene: 41407297
Following gene: 41407301
Centisome position: 26.15
GC content: 69.7
Gene sequence:
>627_bases ATGCCCGCCGAGCGTCACACTAGAGTGACCGCCGGGGCCGAGCGTCACGCCAGCGTGACCGCCGCAGCAGGAGGGACGAC GATGACCGCGCACGATTCTGCGCCACCGCTCTACATTCCGGTGGACGTCGACATGACGATGGTCAAGGCTGCGGTCGCGG CCACCGGGGTCAGCGCGCCGCCGGCCGCCATGCCCGGCCTGCTCGAGGTGGTCAACCAGGCGCGCGCCGAGGGCATCAAC CTCAAAATCGTGCTGCTGGACCACAATCCGCCCAACGACACCCCGCTGCGCGACATCTCGACGGTGGTCGGCGCGGACTA CCACGACGCCACGGTGCTGACCCTCAGCCCCAATTACGTCGGCAGCTACAGCACCCAGTTCCCGCGCGTCACGCTCGAGG CGGGCGAGGACATCGCCAAGACCGGCAACCCGGTGGTCTCCGCGCAGCACTTTCTGCACGAGCTCGACACGCCCGAGTTC CCCTGGACCGGGCTGACCATCTTCCTGTTGATCGCGGTCTTCGCGGCGGCCGTCGGCACCCGCGTGCTGCAGGTCCGCAG CAGGCGCGCAGCAACGCCGCCCGATGCGGCCGGCGCCGACACCGTGACGCCGACAAACACCGCGTAG
Upstream 100 bases:
>100_bases GGTGCCAACTTTAACAGTACGCTTGTCCTGCATTACGTCGGCGGTCCTGATCTCAGTCTTATCGCCGTTCCCGCCGGTTT AAACCCCCGTTCGGCCCCGA
Downstream 100 bases:
>100_bases CACGCCCGTCCGGCTTCGGGCCGCCACCGGCCCGCCGCGCCGCGGCAAACCCGGCAGATAACCGTTCGGTCACATTAAAC GCACGTAGAGAGTGCGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MPAERHTRVTAGAERHASVTAAAGGTTMTAHDSAPPLYIPVDVDMTMVKAAVAATGVSAPPAAMPGLLEVVNQARAEGIN LKIVLLDHNPPNDTPLRDISTVVGADYHDATVLTLSPNYVGSYSTQFPRVTLEAGEDIAKTGNPVVSAQHFLHELDTPEF PWTGLTIFLLIAVFAAAVGTRVLQVRSRRAATPPDAAGADTVTPTNTA
Sequences:
>Translated_208_residues MPAERHTRVTAGAERHASVTAAAGGTTMTAHDSAPPLYIPVDVDMTMVKAAVAATGVSAPPAAMPGLLEVVNQARAEGIN LKIVLLDHNPPNDTPLRDISTVVGADYHDATVLTLSPNYVGSYSTQFPRVTLEAGEDIAKTGNPVVSAQHFLHELDTPEF PWTGLTIFLLIAVFAAAVGTRVLQVRSRRAATPPDAAGADTVTPTNTA >Mature_207_residues PAERHTRVTAGAERHASVTAAAGGTTMTAHDSAPPLYIPVDVDMTMVKAAVAATGVSAPPAAMPGLLEVVNQARAEGINL KIVLLDHNPPNDTPLRDISTVVGADYHDATVLTLSPNYVGSYSTQFPRVTLEAGEDIAKTGNPVVSAQHFLHELDTPEFP WTGLTIFLLIAVFAAAVGTRVLQVRSRRAATPPDAAGADTVTPTNTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21710; Mature: 21579
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAERHTRVTAGAERHASVTAAAGGTTMTAHDSAPPLYIPVDVDMTMVKAAVAATGVSAP CCCCCCCEEECCCCCCCEEEEECCCCEEEECCCCCCEEEEECCCHHHHHHHHHHCCCCCC PAAMPGLLEVVNQARAEGINLKIVLLDHNPPNDTPLRDISTVVGADYHDATVLTLSPNYV CCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCC GSYSTQFPRVTLEAGEDIAKTGNPVVSAQHFLHELDTPEFPWTGLTIFLLIAVFAAAVGT CCCCCCCCEEEECCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH RVLQVRSRRAATPPDAAGADTVTPTNTA HHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PAERHTRVTAGAERHASVTAAAGGTTMTAHDSAPPLYIPVDVDMTMVKAAVAATGVSAP CCCCCCEEECCCCCCCEEEEECCCCEEEECCCCCCEEEEECCCHHHHHHHHHHCCCCCC PAAMPGLLEVVNQARAEGINLKIVLLDHNPPNDTPLRDISTVVGADYHDATVLTLSPNYV CCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCC GSYSTQFPRVTLEAGEDIAKTGNPVVSAQHFLHELDTPEFPWTGLTIFLLIAVFAAAVGT CCCCCCCCEEEECCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH RVLQVRSRRAATPPDAAGADTVTPTNTA HHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA