| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407254
Identifier: 41407254
GI number: 41407254
Start: 1211696
End: 1213090
Strand: Direct
Name: 41407254
Synonym: MAP1156
Alternate gene names: NA
Gene position: 1211696-1213090 (Clockwise)
Preceding gene: 41407253
Following gene: 41407259
Centisome position: 25.09
GC content: 67.96
Gene sequence:
>1395_bases ATGAAACGGCTTTCGAGTGTCGATGCGGCGTTTTGGTCGGCGGAAACCGCCGGCTGGCATATGCATGTGGGGGCGTTGGC GATCTGCGACCCGAAAGGGTCCGCGGAGTACAGCTTTGAACGACTCCGTCAATTACTGATCGAGCGACTGCCGGAGGTGC CGCAGTTGCGATGGCGGGTCACCGGCGCGCCGCTGGGACTGGACCGGCCGTGGTTCGTCGAAGACGAGGAGCTGGACGTC GATTTCCACCTCCGCCGCATCGGTGTTCCGGCTCCGGGCGGTCGCCGCGAGCTCGAGGAGCTGGTGGGCCGGTTGATGTC CTACAAGCTGGATCGCTCGCGGCCGTTGTGGGAGATGTGGGTGATCGAGGGCCTGGACGGCAACGCGGGCGGCCGGTTCG CGACGCTCACCAAGATGCATCACGCCATCGTCGACGGTGTCTCCGGCGCCGGGCTGGGCGAGATCCTGTTGGACGCCACG CCGGAACCCCGGCCGCCGCAACAGGAGACGGTGGGATCGCTGGTCGGGTTCCAGCTGCCCGGGCTGGAGCGGCGCGCGGT GGGGGCGCTGATCAACGTCGGCGTCAAGACGCCGTTCCGCATCGCGCGGCTGCTGGAGCAGACCGTGCGCCAGCAGGTTG CCACGCTCGGCGTGCGCAGCCGGCCGCCACGCTACTTCGAAGCGCCGAAAACCCGCTTCAATGCGCCGGTTTCGCCGCAC CGCCGGGTCACCGGCTGCCGGGTGGAACTGGCCCGCGCCAAGGCGATCAAGGACGCCTACGACGTCAAGCTCAACGACGT GGTGCTGGCCCTGGTGGCCGGCGCCGTCCGCGACTATCTGCAGAAGCGCGGTGAGCTGCCGGCCAAGCCGCTCATCGCGC AGATCCCGGTCTCCACCCGCACCGACGAGAACAAGGACGACATCGGCAACAAGGTCAGCTCGATGACGGTGTCGTTGGCC ACCCACATCGAGGATCCCGGCGAGCGGCTGCGGGCCATCCACGACAGCACGCAGAGCGCCAAGCTGATGGCCAAGGCGTT GTCGGCGCACCAGATCATGGGGCTGACGGAGACCACCCCGCCGGGGCTGTTGCACCTGGCCGCGCGGGCCTACACGGCCA GCGGGTTGTCGCGAAACCTGGCTCCCATCAACCTGGTTGTGTCCAACGTGCCCGGCCCGCCGTTCCCGTTGTACATGGCC GGCGCCAAGCTGGACTCGCTGGGGCCGCCGGTCATGGACGTCGCGCTGAACATCACCTGCTTCTCCTACACCGACTACCT GGACTTCGGTTTCGTCACCACCCCCGAGGTGGCCAATGACATCGACGACATGGCCGATCGGATCGAGCCGGCCCTGACCG ATCTGGAGAAGGCCGCCGCGGGCGAGACCGGCTGA
Upstream 100 bases:
>100_bases GTCGGACCGCTGGCCATGTGGACGCTTCCGGCGCCGAGGCGGCGGGTAGTTTGTTTGCCATTGCTGGTCGCGACGGGGGT TGGGGGGCTACGGTCGGGTG
Downstream 100 bases:
>100_bases GCGCGAGTCTGCTTCAGCGAGCTGAAGTCTCTTCGGCGAGCGTCACGCTAGCGTGACCGCCGCAAGCGAGCGTCACGCCA GCGTGACGCCGCGCCGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Putative triacylglycerol synthase Rv1425/MT1468 [H]
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MKRLSSVDAAFWSAETAGWHMHVGALAICDPKGSAEYSFERLRQLLIERLPEVPQLRWRVTGAPLGLDRPWFVEDEELDV DFHLRRIGVPAPGGRRELEELVGRLMSYKLDRSRPLWEMWVIEGLDGNAGGRFATLTKMHHAIVDGVSGAGLGEILLDAT PEPRPPQQETVGSLVGFQLPGLERRAVGALINVGVKTPFRIARLLEQTVRQQVATLGVRSRPPRYFEAPKTRFNAPVSPH RRVTGCRVELARAKAIKDAYDVKLNDVVLALVAGAVRDYLQKRGELPAKPLIAQIPVSTRTDENKDDIGNKVSSMTVSLA THIEDPGERLRAIHDSTQSAKLMAKALSAHQIMGLTETTPPGLLHLAARAYTASGLSRNLAPINLVVSNVPGPPFPLYMA GAKLDSLGPPVMDVALNITCFSYTDYLDFGFVTTPEVANDIDDMADRIEPALTDLEKAAAGETG
Sequences:
>Translated_464_residues MKRLSSVDAAFWSAETAGWHMHVGALAICDPKGSAEYSFERLRQLLIERLPEVPQLRWRVTGAPLGLDRPWFVEDEELDV DFHLRRIGVPAPGGRRELEELVGRLMSYKLDRSRPLWEMWVIEGLDGNAGGRFATLTKMHHAIVDGVSGAGLGEILLDAT PEPRPPQQETVGSLVGFQLPGLERRAVGALINVGVKTPFRIARLLEQTVRQQVATLGVRSRPPRYFEAPKTRFNAPVSPH RRVTGCRVELARAKAIKDAYDVKLNDVVLALVAGAVRDYLQKRGELPAKPLIAQIPVSTRTDENKDDIGNKVSSMTVSLA THIEDPGERLRAIHDSTQSAKLMAKALSAHQIMGLTETTPPGLLHLAARAYTASGLSRNLAPINLVVSNVPGPPFPLYMA GAKLDSLGPPVMDVALNITCFSYTDYLDFGFVTTPEVANDIDDMADRIEPALTDLEKAAAGETG >Mature_464_residues MKRLSSVDAAFWSAETAGWHMHVGALAICDPKGSAEYSFERLRQLLIERLPEVPQLRWRVTGAPLGLDRPWFVEDEELDV DFHLRRIGVPAPGGRRELEELVGRLMSYKLDRSRPLWEMWVIEGLDGNAGGRFATLTKMHHAIVDGVSGAGLGEILLDAT PEPRPPQQETVGSLVGFQLPGLERRAVGALINVGVKTPFRIARLLEQTVRQQVATLGVRSRPPRYFEAPKTRFNAPVSPH RRVTGCRVELARAKAIKDAYDVKLNDVVLALVAGAVRDYLQKRGELPAKPLIAQIPVSTRTDENKDDIGNKVSSMTVSLA THIEDPGERLRAIHDSTQSAKLMAKALSAHQIMGLTETTPPGLLHLAARAYTASGLSRNLAPINLVVSNVPGPPFPLYMA GAKLDSLGPPVMDVALNITCFSYTDYLDFGFVTTPEVANDIDDMADRIEPALTDLEKAAAGETG
Specific function: Upon expression in E.coli functions very weakly as a triacylglycerol synthase, making triacylglycerol (TG) from diolein and long-chain fatty acyl-CoA. Has no wax synthase activity [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the long-chain O-acyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014292 - InterPro: IPR004255 [H]
Pfam domain/function: PF03007 UPF0089 [H]
EC number: =2.3.1.20 [H]
Molecular weight: Translated: 50702; Mature: 50702
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLSSVDAAFWSAETAGWHMHVGALAICDPKGSAEYSFERLRQLLIERLPEVPQLRWRV CCCCHHHHHHHHCCCCCCEEEEECEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE TGAPLGLDRPWFVEDEELDVDFHLRRIGVPAPGGRRELEELVGRLMSYKLDRSRPLWEMW ECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEE VIEGLDGNAGGRFATLTKMHHAIVDGVSGAGLGEILLDATPEPRPPQQETVGSLVGFQLP EEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCC GLERRAVGALINVGVKTPFRIARLLEQTVRQQVATLGVRSRPPRYFEAPKTRFNAPVSPH CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCC RRVTGCRVELARAKAIKDAYDVKLNDVVLALVAGAVRDYLQKRGELPAKPLIAQIPVSTR CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCC TDENKDDIGNKVSSMTVSLATHIEDPGERLRAIHDSTQSAKLMAKALSAHQIMGLTETTP CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC PGLLHLAARAYTASGLSRNLAPINLVVSNVPGPPFPLYMAGAKLDSLGPPVMDVALNITC CHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHEEEEEE FSYTDYLDFGFVTTPEVANDIDDMADRIEPALTDLEKAAAGETG EEECCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKRLSSVDAAFWSAETAGWHMHVGALAICDPKGSAEYSFERLRQLLIERLPEVPQLRWRV CCCCHHHHHHHHCCCCCCEEEEECEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE TGAPLGLDRPWFVEDEELDVDFHLRRIGVPAPGGRRELEELVGRLMSYKLDRSRPLWEMW ECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEE VIEGLDGNAGGRFATLTKMHHAIVDGVSGAGLGEILLDATPEPRPPQQETVGSLVGFQLP EEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCC GLERRAVGALINVGVKTPFRIARLLEQTVRQQVATLGVRSRPPRYFEAPKTRFNAPVSPH CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCC RRVTGCRVELARAKAIKDAYDVKLNDVVLALVAGAVRDYLQKRGELPAKPLIAQIPVSTR CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCC TDENKDDIGNKVSSMTVSLATHIEDPGERLRAIHDSTQSAKLMAKALSAHQIMGLTETTP CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC PGLLHLAARAYTASGLSRNLAPINLVVSNVPGPPFPLYMAGAKLDSLGPPVMDVALNITC CHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHEEEEEE FSYTDYLDFGFVTTPEVANDIDDMADRIEPALTDLEKAAAGETG EEECCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]